Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5696

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
6,507,618	+				-0.5
6,507,650	+				+0.4
6,507,651	-				-0.6
6,507,661	+				-0.6
6,507,661	+				-0.4
6,507,661	+				+0.4
6,507,661	+				+0.4
6,507,662	-				+1.0
6,507,662	-				-0.6
6,507,662	-				-0.6
6,507,662	-				+0.4
6,507,665	+				+0.2
6,507,665	+				+0.4
6,507,666	-				+1.5
6,507,666	-				+1.6
6,507,666	-				+2.0
6,507,666	-				+0.4
6,507,666	-				-0.6
6,507,666	-				+0.4
6,507,666	-				+1.5
6,507,666	-				+1.5
6,507,805	+		Pf6N2E2_5694	0.27	+0.4
6,507,806	-		Pf6N2E2_5694	0.27	+0.4
6,507,806	-		Pf6N2E2_5694	0.27	+0.4
6,507,806	-		Pf6N2E2_5694	0.27	-0.0
6,507,946	+		Pf6N2E2_5694	0.62	+0.4
6,507,946	+		Pf6N2E2_5694	0.62	-1.2
6,507,946	+		Pf6N2E2_5694	0.62	-0.6
6,507,946	+		Pf6N2E2_5694	0.62	+1.4
6,507,947	-		Pf6N2E2_5694	0.62	+0.9
6,507,947	-		Pf6N2E2_5694	0.62	+1.6
6,508,012	+		Pf6N2E2_5694	0.78	+0.4
6,508,013	-		Pf6N2E2_5694	0.78	-1.2
6,508,013	-		Pf6N2E2_5694	0.78	+0.4
6,508,013	-		Pf6N2E2_5694	0.78	+0.4
6,508,099	+				+0.4
6,508,099	+				+0.4
6,508,099	+				+0.4
6,508,099	+				+1.3
6,508,099	+				+0.4
6,508,099	+				+0.4
6,508,099	+				+0.4
6,508,100	-				+1.7
6,508,100	-				+0.4
6,508,116	+				+1.0
6,508,121	+				+0.4
6,508,121	+				-1.2
6,508,121	+				-0.6
6,508,121	+				+1.4
6,508,122	-				+0.4
6,508,229	-		Pf6N2E2_5695	0.28	+0.4
6,508,328	+		Pf6N2E2_5695	0.50	+3.1
6,508,411	+		Pf6N2E2_5695	0.69	+1.4
6,508,411	+		Pf6N2E2_5695	0.69	+1.7
6,508,411	+		Pf6N2E2_5695	0.69	-1.2
6,508,411	+		Pf6N2E2_5695	0.69	-1.2
6,508,411	+		Pf6N2E2_5695	0.69	+1.9
6,508,411	+		Pf6N2E2_5695	0.69	+4.1
6,508,412	-		Pf6N2E2_5695	0.69	-0.6
6,508,412	-		Pf6N2E2_5695	0.69	+0.9
6,508,412	-		Pf6N2E2_5695	0.69	+0.4
6,508,417	+		Pf6N2E2_5695	0.70	+1.3
6,508,418	-		Pf6N2E2_5695	0.70	+0.4
6,508,418	-		Pf6N2E2_5695	0.70	+1.6
6,508,418	-		Pf6N2E2_5695	0.70	+1.4
6,508,418	-		Pf6N2E2_5695	0.70	+0.4
6,508,418	-		Pf6N2E2_5695	0.70	-1.2
6,508,418	-		Pf6N2E2_5695	0.70	+2.6
6,508,549	+				-1.2
6,508,581	+				-1.2
6,508,581	+				-1.2
6,508,852	+		Pf6N2E2_5696	0.40	+1.5
6,508,852	+		Pf6N2E2_5696	0.40	-1.6
6,508,852	+		Pf6N2E2_5696	0.40	-1.2
6,508,853	-		Pf6N2E2_5696	0.40	+0.4
6,508,853	-		Pf6N2E2_5696	0.40	+0.4
6,508,932	+		Pf6N2E2_5696	0.51	-1.2
6,509,116	+		Pf6N2E2_5696	0.76	+0.4
6,509,116	+		Pf6N2E2_5696	0.76	+0.4
6,509,116	+		Pf6N2E2_5696	0.76	-0.6
6,509,116	+		Pf6N2E2_5696	0.76	+0.4
6,509,116	+		Pf6N2E2_5696	0.76	-1.2
6,509,116	+		Pf6N2E2_5696	0.76	-1.2
6,509,117	-		Pf6N2E2_5696	0.76	+0.4
6,509,117	-		Pf6N2E2_5696	0.76	-1.2
6,509,117	-		Pf6N2E2_5696	0.76	+0.4
6,509,117	-		Pf6N2E2_5696	0.76	+0.4
6,509,117	-		Pf6N2E2_5696	0.76	+1.4
6,509,274	+				+0.4
6,509,274	+				-0.6
6,509,274	+				-0.6
6,509,275	-				-0.6
6,509,275	-				-1.9
6,509,280	+				-0.6
6,509,280	+				-1.4
6,509,280	+				-0.2
6,509,280	+				-0.6
6,509,280	+				-1.6
6,509,280	+				-0.6
6,509,281	-				-0.6
6,509,281	-				+0.4
6,509,281	-				+0.4
6,509,284	+				+0.4
6,509,284	+				-0.3
6,509,284	+				+0.4
6,509,284	+				+0.4
6,509,284	+				-0.6
6,509,284	+				-0.6
6,509,284	+				-0.6
6,509,284	+				+0.4
6,509,284	+				-0.6
6,509,285	-				+0.4
6,509,285	-				+1.5
6,509,345	+				+0.4
6,509,441	+				+0.4
6,509,442	-				+1.0
6,509,442	-				+1.4
6,509,612	+		Pf6N2E2_5697	0.22	+0.4
6,509,612	+		Pf6N2E2_5697	0.22	-0.6
6,509,613	-		Pf6N2E2_5697	0.22	+0.4
6,509,613	-		Pf6N2E2_5697	0.22	+0.4
6,509,613	-		Pf6N2E2_5697	0.22	+0.4
6,509,671	+		Pf6N2E2_5697	0.27	-0.6
6,509,672	-		Pf6N2E2_5697	0.27	-1.6
6,509,690	+		Pf6N2E2_5697	0.28	+0.4
6,509,691	-		Pf6N2E2_5697	0.28	+0.4
6,509,885	+		Pf6N2E2_5697	0.43	+0.4
6,509,885	+		Pf6N2E2_5697	0.43	-0.6
6,509,921	+		Pf6N2E2_5697	0.46	+0.4
6,509,921	+		Pf6N2E2_5697	0.46	+0.4
6,509,921	+		Pf6N2E2_5697	0.46	+0.4
6,509,921	+		Pf6N2E2_5697	0.46	+1.7
6,509,921	+		Pf6N2E2_5697	0.46	-0.6
6,509,922	-		Pf6N2E2_5697	0.46	+0.4
6,509,922	-		Pf6N2E2_5697	0.46	+1.9
6,509,922	-		Pf6N2E2_5697	0.46	+0.4
6,509,922	-		Pf6N2E2_5697	0.46	+1.1
6,509,922	-		Pf6N2E2_5697	0.46	+0.4
6,509,944	+		Pf6N2E2_5697	0.47	+1.7
6,509,944	+		Pf6N2E2_5697	0.47	+0.4
6,509,957	+		Pf6N2E2_5697	0.48	+1.2
6,509,957	+		Pf6N2E2_5697	0.48	+1.6
6,509,957	+		Pf6N2E2_5697	0.48	-0.6
6,509,957	+		Pf6N2E2_5697	0.48	+0.4
6,509,957	+		Pf6N2E2_5697	0.48	+1.3
6,509,957	+		Pf6N2E2_5697	0.48	+1.1
6,509,957	+		Pf6N2E2_5697	0.48	+2.0
6,509,957	+		Pf6N2E2_5697	0.48	-0.6
6,509,958	-		Pf6N2E2_5697	0.48	+1.6
6,509,958	-		Pf6N2E2_5697	0.48	+0.4
6,509,958	-		Pf6N2E2_5697	0.48	-0.6
6,509,959	+		Pf6N2E2_5697	0.49	-1.2
6,509,959	+		Pf6N2E2_5697	0.49	+0.8
6,509,959	+		Pf6N2E2_5697	0.49	+0.4
6,509,959	+		Pf6N2E2_5697	0.49	+0.4
6,509,959	+		Pf6N2E2_5697	0.49	+0.7
6,509,960	-		Pf6N2E2_5697	0.49	+0.4
6,509,960	-		Pf6N2E2_5697	0.49	+0.4
6,509,960	-		Pf6N2E2_5697	0.49	+0.4
6,509,960	-		Pf6N2E2_5697	0.49	-1.2
6,509,960	-		Pf6N2E2_5697	0.49	+1.3
6,509,960	-		Pf6N2E2_5697	0.49	+0.5
6,509,977	+		Pf6N2E2_5697	0.50	+1.5
6,510,166	+		Pf6N2E2_5697	0.64	+0.4
6,510,166	+		Pf6N2E2_5697	0.64	+0.4
6,510,166	+		Pf6N2E2_5697	0.64	-1.2
6,510,166	+		Pf6N2E2_5697	0.64	-1.2
6,510,167	-		Pf6N2E2_5697	0.64	+0.4
6,510,167	-		Pf6N2E2_5697	0.64	+0.4
6,510,172	+		Pf6N2E2_5697	0.65	-0.6
6,510,172	+		Pf6N2E2_5697	0.65	+0.4
6,510,172	+		Pf6N2E2_5697	0.65	+0.4
6,510,172	+		Pf6N2E2_5697	0.65	+0.4
6,510,173	-		Pf6N2E2_5697	0.65	-0.6
6,510,185	-		Pf6N2E2_5697	0.66	-0.6
6,510,205	+		Pf6N2E2_5697	0.67	+0.4
6,510,205	+		Pf6N2E2_5697	0.67	+0.4
6,510,205	+		Pf6N2E2_5697	0.67	+0.4
6,510,206	-		Pf6N2E2_5697	0.67	+0.4
6,510,208	+		Pf6N2E2_5697	0.67	+0.4
6,510,209	-		Pf6N2E2_5697	0.67	+1.7
6,510,209	-		Pf6N2E2_5697	0.67	+0.4
6,510,209	-		Pf6N2E2_5697	0.67	+0.4
6,510,209	-		Pf6N2E2_5697	0.67	+0.4
6,510,209	-		Pf6N2E2_5697	0.67	+0.4