Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4224

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
4,912,736	+				+0.6
4,912,736	+				-1.0
4,912,736	+				-1.4
4,912,736	+				-1.0
4,912,737	-				+0.6
4,912,737	-				-0.4
4,912,737	-				-0.7
4,912,737	-				-0.5
4,912,737	-				+0.6
4,912,783	+				+0.1
4,912,922	-				-1.4
4,912,922	-				-1.0
4,912,922	-				+0.6
4,912,929	+				+0.6
4,912,929	+				-1.0
4,912,929	+				+0.6
4,912,929	+				+0.6
4,912,929	+				+0.1
4,912,929	+				-1.0
4,912,929	+				-0.4
4,912,929	+				-1.0
4,912,929	+				+0.1
4,912,929	+				-0.4
4,912,929	+				-1.0
4,912,929	+				+0.6
4,912,929	+				+0.6
4,912,929	+				+0.6
4,912,929	+				-0.0
4,912,929	+				-1.8
4,912,930	-				+0.6
4,912,930	-				-0.4
4,912,930	-				-1.0
4,912,930	-				-0.4
4,912,930	-				+0.2
4,912,930	-				-0.4
4,912,930	-				-0.8
4,912,930	-				-0.4
4,912,930	-				-0.4
4,912,930	-				+0.6
4,912,930	-				+0.6
4,912,930	-				-0.4
4,912,959	+				-0.4
4,912,959	+				-0.3
4,912,959	+				-1.4
4,912,959	+				-2.4
4,912,959	+				-0.4
4,912,959	+				+0.6
4,912,959	+				-1.4
4,912,960	-				-2.2
4,912,960	-				+0.6
4,912,960	-				-1.3
4,912,960	-				+0.6
4,912,961	+				+0.3
4,912,961	+				+0.6
4,912,961	+				-0.4
4,912,961	+				+0.6
4,912,962	-				-1.0
4,912,962	-				-0.2
4,912,962	-				-0.5
4,912,962	-				-0.4
4,912,962	-				-0.6
4,912,962	-				-1.0
4,912,962	-				+0.6
4,912,962	-				-1.4
4,912,977	+				-1.0
4,912,977	+				-0.4
4,912,977	+				-1.0
4,912,978	-				-0.4
4,912,990	-				+0.6
4,912,990	-				+0.6
4,913,023	+				-0.4
4,913,699	-				-1.0
4,913,760	-				-0.4
4,913,760	-				-0.4
4,913,760	-				+0.6
4,913,845	+		Pf6N2E2_4224	0.23	+0.6
4,913,845	+		Pf6N2E2_4224	0.23	-1.0
4,913,846	-		Pf6N2E2_4224	0.23	-0.5
4,913,846	-		Pf6N2E2_4224	0.23	+1.0
4,913,907	-		Pf6N2E2_4224	0.34	+0.5
4,914,005	+		Pf6N2E2_4224	0.51	+0.6
4,914,005	+		Pf6N2E2_4224	0.51	+0.6
4,914,005	+		Pf6N2E2_4224	0.51	+0.6
4,914,005	+		Pf6N2E2_4224	0.51	+0.6
4,914,006	-		Pf6N2E2_4224	0.51	-1.4
4,914,006	-		Pf6N2E2_4224	0.51	+0.6
4,914,006	-		Pf6N2E2_4224	0.51	+0.6
4,914,006	-		Pf6N2E2_4224	0.51	+0.6
4,914,006	-		Pf6N2E2_4224	0.51	+0.6
4,914,012	-		Pf6N2E2_4224	0.53	+0.6
4,914,012	-		Pf6N2E2_4224	0.53	-0.0
4,914,131	+		Pf6N2E2_4224	0.74	-1.4
4,914,132	-		Pf6N2E2_4224	0.74	+0.6
4,914,132	-		Pf6N2E2_4224	0.74	+0.6
4,914,306	-				+0.6
4,914,422	-				-1.8
4,914,422	-				-1.8
4,914,514	+				-2.3
4,914,514	+				+1.6
4,914,515	-				+1.3
4,914,768	-		Pf6N2E2_4225	0.48	-0.3
4,914,773	+		Pf6N2E2_4225	0.49	-1.4
4,914,774	-		Pf6N2E2_4225	0.49	-0.8
4,914,774	-		Pf6N2E2_4225	0.49	+0.6
4,914,779	+		Pf6N2E2_4225	0.50	-0.4
4,914,779	+		Pf6N2E2_4225	0.50	+0.6
4,914,779	+		Pf6N2E2_4225	0.50	-2.2
4,914,779	+		Pf6N2E2_4225	0.50	+0.6
4,914,780	-		Pf6N2E2_4225	0.50	+0.6
4,914,780	-		Pf6N2E2_4225	0.50	-0.6
4,914,873	-		Pf6N2E2_4225	0.64	-0.4
4,915,103	+				-0.4
4,915,103	+				+1.0
4,915,103	+				+0.6
4,915,104	-				-1.0
4,915,172	+				+0.6
4,915,172	+				+0.6
4,915,172	+				-1.0
4,915,172	+				+0.6
4,915,172	+				-1.8
4,915,172	+				+0.6
4,915,173	-				-1.0
4,915,173	-				+0.6
4,915,173	-				+0.6
4,915,175	+				+0.6
4,915,175	+				+0.6
4,915,176	-				+0.6
4,915,176	-				-0.4
4,915,176	-				-0.5
4,915,176	-				-1.0
4,915,176	-				+0.6
4,915,176	-				-1.4
4,915,176	-				+0.6
4,915,176	-				+0.6
4,915,176	-				+0.6