Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2595

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,051,421	+		Pf6N2E2_2593	0.80	+1.7
3,051,513	+		Pf6N2E2_2593	0.85	-1.2
3,051,514	-		Pf6N2E2_2593	0.85	+0.4
3,051,514	-		Pf6N2E2_2593	0.85	+1.2
3,051,514	-		Pf6N2E2_2593	0.85	+0.4
3,051,514	-		Pf6N2E2_2593	0.85	-0.6
3,051,737	+				+1.9
3,051,828	+				+0.4
3,051,829	-				-1.2
3,051,902	+		Pf6N2E2_2594	0.31	-2.0
3,051,902	+		Pf6N2E2_2594	0.31	+0.4
3,051,902	+		Pf6N2E2_2594	0.31	+0.4
3,051,902	+		Pf6N2E2_2594	0.31	-0.2
3,051,902	+		Pf6N2E2_2594	0.31	-2.0
3,051,902	+		Pf6N2E2_2594	0.31	+0.4
3,051,903	-		Pf6N2E2_2594	0.31	-0.6
3,051,903	-		Pf6N2E2_2594	0.31	+1.4
3,051,903	-		Pf6N2E2_2594	0.31	+0.4
3,051,903	-		Pf6N2E2_2594	0.31	+1.2
3,051,903	-		Pf6N2E2_2594	0.31	+1.6
3,051,903	-		Pf6N2E2_2594	0.31	+1.9
3,051,903	-		Pf6N2E2_2594	0.31	+1.6
3,051,903	-		Pf6N2E2_2594	0.31	+1.7
3,051,903	-		Pf6N2E2_2594	0.31	+0.4
3,051,903	-		Pf6N2E2_2594	0.31	-0.6
3,051,903	-		Pf6N2E2_2594	0.31	-0.6
3,051,985	+		Pf6N2E2_2594	0.57	+0.4
3,052,051	+		Pf6N2E2_2594	0.77	+0.4
3,052,051	+		Pf6N2E2_2594	0.77	+1.5
3,052,051	+		Pf6N2E2_2594	0.77	+2.0
3,052,052	-		Pf6N2E2_2594	0.77	+1.5
3,052,115	-				+0.4
3,052,131	+				+0.4
3,052,131	+				-0.6
3,052,131	+				-0.6
3,052,132	-				+1.2
3,052,132	-				+0.4
3,052,165	+				+1.2
3,052,165	+				+0.4
3,052,165	+				+0.4
3,052,166	-				+0.4
3,052,166	-				+0.4
3,052,184	+				+0.4
3,052,184	+				+1.3
3,052,184	+				+0.4
3,052,187	+				+1.6
3,052,318	+				+0.4
3,052,318	+				+1.4
3,052,318	+				-0.6
3,052,318	+				+0.4
3,052,318	+				+1.3
3,052,318	+				+1.8
3,052,318	+				+1.0
3,052,318	+				+0.4
3,052,318	+				+0.4
3,052,318	+				+1.4
3,052,319	-				-1.4
3,052,319	-				+0.4
3,052,319	-				+0.4
3,052,319	-				-2.0
3,052,319	-				-0.1
3,052,319	-				-1.0
3,052,324	+				+0.4
3,052,325	-				-0.6
3,052,325	-				+0.4
3,052,343	+				+1.6
3,052,343	+				+0.4
3,052,343	+				-0.2
3,052,344	-				+0.4
3,052,344	-				-0.2
3,052,344	-				-0.6
3,052,344	-				-0.3
3,052,862	+		Pf6N2E2_2595	0.38	+0.3
3,052,862	+		Pf6N2E2_2595	0.38	-0.6
3,052,862	+		Pf6N2E2_2595	0.38	+0.4
3,052,863	-		Pf6N2E2_2595	0.38	-0.6
3,052,863	-		Pf6N2E2_2595	0.38	-1.2
3,052,863	-		Pf6N2E2_2595	0.38	-0.6
3,052,863	-		Pf6N2E2_2595	0.38	+0.4
3,052,990	+		Pf6N2E2_2595	0.48	-1.2
3,053,077	-		Pf6N2E2_2595	0.54	-0.6
3,053,128	+		Pf6N2E2_2595	0.57	-1.2
3,053,128	+		Pf6N2E2_2595	0.57	-0.6
3,053,129	-				+0.4
3,053,129	-		Pf6N2E2_2595	0.57	-0.6
3,053,129	-		Pf6N2E2_2595	0.57	+0.4
3,053,129	-		Pf6N2E2_2595	0.57	-0.9
3,053,215	-		Pf6N2E2_2595	0.64	-0.6
3,053,216	+				-0.6
3,053,216	+		Pf6N2E2_2595	0.64	-0.6
3,053,217	-		Pf6N2E2_2595	0.64	-0.6
3,053,217	-		Pf6N2E2_2595	0.64	+0.4
3,053,519	-		Pf6N2E2_2595	0.85	+0.4
3,053,519	-		Pf6N2E2_2595	0.85	-0.4
3,053,519	-		Pf6N2E2_2595	0.85	+0.4
3,053,519	-		Pf6N2E2_2595	0.85	+0.4
3,053,556	+		Pf6N2E2_2595	0.88	+0.4
3,053,557	-		Pf6N2E2_2595	0.88	-1.2
3,053,557	-		Pf6N2E2_2595	0.88	+0.4
3,053,557	-		Pf6N2E2_2595	0.88	+0.4
3,053,637	-				-0.6
3,053,704	+				-0.6
3,053,882	+		Pf6N2E2_2596	0.13	+0.4
3,053,974	+		Pf6N2E2_2596	0.21	-0.6
3,053,974	+		Pf6N2E2_2596	0.21	+0.5
3,053,974	+		Pf6N2E2_2596	0.21	+0.4
3,053,975	-		Pf6N2E2_2596	0.21	+0.5
3,053,975	-		Pf6N2E2_2596	0.21	+0.4
3,053,975	-		Pf6N2E2_2596	0.21	+0.4
3,053,975	-		Pf6N2E2_2596	0.21	+0.4
3,053,975	-		Pf6N2E2_2596	0.21	+0.4
3,053,975	-		Pf6N2E2_2596	0.21	+0.4
3,053,975	-		Pf6N2E2_2596	0.21	+0.4
3,054,120	+		Pf6N2E2_2596	0.34	+0.4
3,054,120	+		Pf6N2E2_2596	0.34	+0.6
3,054,120	+		Pf6N2E2_2596	0.34	+0.2
3,054,120	+		Pf6N2E2_2596	0.34	-2.0
3,054,121	-		Pf6N2E2_2596	0.34	-0.6
3,054,121	-		Pf6N2E2_2596	0.34	+0.4
3,054,121	-		Pf6N2E2_2596	0.34	+0.4
3,054,207	+		Pf6N2E2_2596	0.41	+0.0
3,054,208	-		Pf6N2E2_2596	0.41	+0.4
3,054,208	-		Pf6N2E2_2596	0.41	-1.6
3,054,319	+		Pf6N2E2_2596	0.51	-0.2
3,054,319	+		Pf6N2E2_2596	0.51	+0.7
3,054,319	+		Pf6N2E2_2596	0.51	-1.2
3,054,320	-		Pf6N2E2_2596	0.51	+0.4
3,054,320	-		Pf6N2E2_2596	0.51	+0.4
3,054,369	+		Pf6N2E2_2596	0.55	+0.4
3,054,450	+		Pf6N2E2_2596	0.62	-2.2
3,054,450	+		Pf6N2E2_2596	0.62	+0.4
3,054,451	-		Pf6N2E2_2596	0.62	+0.4