Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2198

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,604,127	-		Pf6N2E2_2197	0.18	+0.1
2,604,165	+		Pf6N2E2_2197	0.21	+0.3
2,604,166	-		Pf6N2E2_2197	0.21	-0.7
2,604,261	+		Pf6N2E2_2197	0.30	+0.3
2,604,273	+		Pf6N2E2_2197	0.31	-0.1
2,604,274	-		Pf6N2E2_2197	0.31	-0.7
2,604,274	-		Pf6N2E2_2197	0.31	+0.3
2,604,541	-		Pf6N2E2_2197	0.54	-0.7
2,604,541	-		Pf6N2E2_2197	0.54	+0.3
2,604,918	+		Pf6N2E2_2197	0.87	+0.3
2,604,918	+		Pf6N2E2_2197	0.87	+0.3
2,604,918	+		Pf6N2E2_2197	0.87	-0.3
2,604,918	+		Pf6N2E2_2197	0.87	-0.7
2,604,918	+		Pf6N2E2_2197	0.87	+0.3
2,604,918	+		Pf6N2E2_2197	0.87	+0.3
2,604,918	+		Pf6N2E2_2197	0.87	-1.4
2,604,919	-		Pf6N2E2_2197	0.87	-1.2
2,604,919	-		Pf6N2E2_2197	0.87	-0.8
2,604,919	-		Pf6N2E2_2197	0.87	+0.3
2,604,919	-		Pf6N2E2_2197	0.87	+0.3
2,604,919	-		Pf6N2E2_2197	0.87	+0.3
2,605,145	+				-0.7
2,605,146	-				-0.7
2,605,146	-				-1.0
2,605,146	-				-1.2
2,605,146	-				+0.3
2,605,146	-				+0.3
2,605,146	-				-2.8
2,605,229	-		Pf6N2E2_2198	0.19	-0.7
2,605,229	-		Pf6N2E2_2198	0.19	-0.2
2,605,229	-		Pf6N2E2_2198	0.19	+0.3
2,605,229	-		Pf6N2E2_2198	0.19	+0.3
2,605,384	+		Pf6N2E2_2198	0.48	-0.4
2,605,384	+		Pf6N2E2_2198	0.48	+1.3
2,605,385	-		Pf6N2E2_2198	0.48	+0.0
2,605,464	-		Pf6N2E2_2198	0.63	+0.6
2,605,464	-		Pf6N2E2_2198	0.63	+0.3
2,605,706	-				-0.9
2,605,716	+				-0.7
2,605,716	+				+0.3
2,605,717	-				+0.3
2,605,717	-				-0.7
2,605,717	-				+0.3
2,605,717	-				-0.8
2,605,800	+		Pf6N2E2_2199	0.13	-1.2
2,605,800	+		Pf6N2E2_2199	0.13	+0.3
2,605,800	+		Pf6N2E2_2199	0.13	+0.3
2,605,800	+		Pf6N2E2_2199	0.13	-0.7
2,605,800	+		Pf6N2E2_2199	0.13	-0.2
2,605,800	+		Pf6N2E2_2199	0.13	-0.7
2,605,801	-		Pf6N2E2_2199	0.13	-0.7
2,605,801	-		Pf6N2E2_2199	0.13	-0.7
2,605,801	-		Pf6N2E2_2199	0.13	-0.7
2,605,801	-		Pf6N2E2_2199	0.13	-0.2
2,605,801	-		Pf6N2E2_2199	0.13	+0.3
2,605,801	-		Pf6N2E2_2199	0.13	-1.2
2,605,871	+		Pf6N2E2_2199	0.20	+0.3
2,605,871	+		Pf6N2E2_2199	0.20	+0.3
2,605,871	+		Pf6N2E2_2199	0.20	-0.7
2,605,872	-		Pf6N2E2_2199	0.20	+0.9
2,606,097	+		Pf6N2E2_2199	0.41	+0.2
2,606,097	+		Pf6N2E2_2199	0.41	-1.7
2,606,097	+		Pf6N2E2_2199	0.41	-1.7
2,606,098	-		Pf6N2E2_2199	0.41	-0.4
2,606,118	+		Pf6N2E2_2199	0.42	+0.3
2,606,119	-		Pf6N2E2_2199	0.43	+0.3
2,606,119	-		Pf6N2E2_2199	0.43	+0.3
2,606,133	+		Pf6N2E2_2199	0.44	+0.3
2,606,133	+		Pf6N2E2_2199	0.44	+0.2
2,606,133	+		Pf6N2E2_2199	0.44	-2.0
2,606,133	+		Pf6N2E2_2199	0.44	+0.3
2,606,134	-		Pf6N2E2_2199	0.44	-0.7
2,606,134	-		Pf6N2E2_2199	0.44	+0.3
2,606,134	-		Pf6N2E2_2199	0.44	-0.7
2,606,134	-		Pf6N2E2_2199	0.44	+0.3
2,606,272	-		Pf6N2E2_2199	0.57	-0.3
2,606,272	-		Pf6N2E2_2199	0.57	-0.7
2,606,503	-		Pf6N2E2_2199	0.78	-1.2
2,606,503	-		Pf6N2E2_2199	0.78	+0.3
2,606,629	-		Pf6N2E2_2199	0.90	+0.3