Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1706

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,013,705	+				-1.2
2,013,705	+				-0.8
2,013,705	+				-1.9
2,013,706	-				-0.8
2,013,706	-				+0.2
2,013,810	-				-0.9
2,013,875	+		Pf6N2E2_1705	0.11	-0.8
2,014,573	+				+0.2
2,014,574	-				-0.8
2,014,574	-				-0.8
2,014,611	+				-0.7
2,015,187	+		Pf6N2E2_1706	0.65	+0.3
2,015,199	+		Pf6N2E2_1706	0.66	+0.3
2,015,199	+		Pf6N2E2_1706	0.66	-0.2
2,015,199	+		Pf6N2E2_1706	0.66	+1.3
2,015,200	-		Pf6N2E2_1706	0.66	-0.3
2,015,515	+				+0.3
2,015,515	+				+0.3
2,015,516	-				-0.7
2,015,757	-		Pf6N2E2_1707	0.16	+0.3
2,016,036	-		Pf6N2E2_1707	0.37	+0.4
2,016,044	+		Pf6N2E2_1707	0.37	+0.3
2,016,044	+		Pf6N2E2_1707	0.37	+0.3
2,016,443	+		Pf6N2E2_1707	0.66	+0.3
2,016,444	-		Pf6N2E2_1707	0.66	+0.3
2,016,459	-		Pf6N2E2_1707	0.67	+0.3