Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5627

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
6,441,374	+		Pf6N2E2_5625	0.68	+0.4
6,441,416	+		Pf6N2E2_5625	0.73	-1.2
6,441,416	+		Pf6N2E2_5625	0.73	+0.4
6,441,417	-		Pf6N2E2_5625	0.73	+0.4
6,441,417	-		Pf6N2E2_5625	0.73	+0.4
6,441,417	-		Pf6N2E2_5625	0.73	+0.4
6,441,417	-		Pf6N2E2_5625	0.73	+0.4
6,441,418	+		Pf6N2E2_5625	0.73	+0.4
6,441,418	+		Pf6N2E2_5625	0.73	+0.4
6,441,418	+		Pf6N2E2_5625	0.73	+0.4
6,441,418	+		Pf6N2E2_5625	0.73	-0.2
6,441,418	+		Pf6N2E2_5625	0.73	-0.6
6,441,419	-		Pf6N2E2_5625	0.74	+0.4
6,441,419	-		Pf6N2E2_5625	0.74	-0.6
6,441,603	+				+0.4
6,441,603	+				-0.6
6,441,610	+				-0.6
6,441,610	+				+0.4
6,441,611	-				-2.8
6,441,611	-				+0.4
6,441,652	+				-0.7
6,441,653	-				+0.4
6,441,728	+		Pf6N2E2_5626	0.11	+0.4
6,441,729	-		Pf6N2E2_5626	0.11	-0.4
6,441,754	-		Pf6N2E2_5626	0.15	+0.4
6,441,754	-		Pf6N2E2_5626	0.15	+0.4
6,441,771	+		Pf6N2E2_5626	0.18	-0.6
6,441,948	+		Pf6N2E2_5626	0.46	+0.4
6,441,948	+		Pf6N2E2_5626	0.46	+0.4
6,441,948	+		Pf6N2E2_5626	0.46	-0.6
6,441,948	+		Pf6N2E2_5626	0.46	-0.6
6,441,948	+		Pf6N2E2_5626	0.46	+0.4
6,441,949	-		Pf6N2E2_5626	0.46	-0.6
6,441,949	-		Pf6N2E2_5626	0.46	-1.6
6,441,949	-		Pf6N2E2_5626	0.46	-0.6
6,441,949	-		Pf6N2E2_5626	0.46	+0.4
6,441,949	-		Pf6N2E2_5626	0.46	+0.4
6,441,956	+		Pf6N2E2_5626	0.47	-1.9
6,441,956	+		Pf6N2E2_5626	0.47	+0.4
6,441,957	-		Pf6N2E2_5626	0.47	+0.4
6,441,968	+		Pf6N2E2_5626	0.49	+0.4
6,441,969	-		Pf6N2E2_5626	0.49	+0.4
6,442,131	+		Pf6N2E2_5626	0.75	-1.2
6,442,319	+				-0.6
6,442,368	+				+0.4
6,442,369	-				+0.4
6,442,404	+		Pf6N2E2_5627	0.14	+0.4
6,442,404	+		Pf6N2E2_5627	0.14	+0.9
6,442,405	-		Pf6N2E2_5627	0.14	-0.4
6,442,405	-		Pf6N2E2_5627	0.14	+0.4
6,442,470	+		Pf6N2E2_5627	0.22	+0.4
6,442,470	+		Pf6N2E2_5627	0.22	+0.4
6,442,470	+		Pf6N2E2_5627	0.22	+1.0
6,442,533	+		Pf6N2E2_5627	0.29	+0.4
6,442,533	+		Pf6N2E2_5627	0.29	+0.4
6,442,534	-		Pf6N2E2_5627	0.29	-0.6
6,442,534	-		Pf6N2E2_5627	0.29	-0.6
6,442,543	-		Pf6N2E2_5627	0.30	+0.4
6,442,543	-		Pf6N2E2_5627	0.30	+0.4
6,442,543	-		Pf6N2E2_5627	0.30	-0.6
6,442,587	+		Pf6N2E2_5627	0.36	-1.9
6,442,707	+		Pf6N2E2_5627	0.50	-0.1
6,442,707	+		Pf6N2E2_5627	0.50	+0.4
6,442,708	-		Pf6N2E2_5627	0.50	+0.4
6,442,877	+		Pf6N2E2_5627	0.71	+0.4
6,442,877	+		Pf6N2E2_5627	0.71	+0.4
6,442,877	+		Pf6N2E2_5627	0.71	+0.7
6,442,877	+		Pf6N2E2_5627	0.71	+0.4
6,443,028	-		Pf6N2E2_5627	0.89	+0.4