Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5589

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
6,406,265	+				-0.6
6,406,265	+				-1.6
6,406,266	-				+0.4
6,406,271	+				-1.6
6,406,278	+				+0.4
6,406,278	+				-1.6
6,406,278	+				+0.4
6,406,279	-				-1.9
6,406,279	-				+0.4
6,406,347	+				+0.4
6,406,348	-				+0.4
6,406,349	+				-1.6
6,406,349	+				+0.4
6,406,349	+				-0.6
6,406,349	+				+0.4
6,406,349	+				+0.4
6,406,350	-				+0.4
6,406,350	-				+0.4
6,406,382	+				+0.4
6,406,382	+				-0.6
6,406,386	+				-0.6
6,406,386	+				+0.0
6,406,386	+				-1.2
6,406,386	+				+0.4
6,406,386	+				+0.2
6,406,387	-				-0.6
6,406,387	-				-1.2
6,406,387	-				+0.4
6,406,574	+		Pf6N2E2_5589	0.21	+0.0
6,406,574	+		Pf6N2E2_5589	0.21	+0.4
6,406,574	+		Pf6N2E2_5589	0.21	-0.6
6,406,574	+		Pf6N2E2_5589	0.21	+0.4
6,406,575	-		Pf6N2E2_5589	0.21	+0.0
6,406,575	-		Pf6N2E2_5589	0.21	-0.6
6,406,576	+		Pf6N2E2_5589	0.21	-0.0
6,406,576	+		Pf6N2E2_5589	0.21	+0.4
6,406,577	-		Pf6N2E2_5589	0.21	-0.6
6,406,577	-		Pf6N2E2_5589	0.21	+0.0
6,406,758	+		Pf6N2E2_5589	0.40	-0.6
6,406,759	-		Pf6N2E2_5589	0.40	+0.0
6,407,158	+		Pf6N2E2_5589	0.81	-1.7
6,407,159	-		Pf6N2E2_5589	0.81	+0.4
6,407,159	-		Pf6N2E2_5589	0.81	+0.2
6,407,378	-				-0.6
6,407,378	-				-1.7
6,407,398	+				+0.4