Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4345

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
5,071,634	+		Pf6N2E2_4344	0.74	-0.5
5,071,634	+		Pf6N2E2_4344	0.74	-1.1
5,071,634	+		Pf6N2E2_4344	0.74	+0.5
5,071,634	+		Pf6N2E2_4344	0.74	-0.8
5,071,635	-		Pf6N2E2_4344	0.74	-0.5
5,071,635	-		Pf6N2E2_4344	0.74	-0.9
5,071,635	-		Pf6N2E2_4344	0.74	-1.5
5,071,635	-		Pf6N2E2_4344	0.74	-1.7
5,071,635	-		Pf6N2E2_4344	0.74	-1.5
5,071,635	-		Pf6N2E2_4344	0.74	-1.3
5,071,739	+		Pf6N2E2_4344	0.78	+0.5
5,071,739	+		Pf6N2E2_4344	0.78	-0.3
5,071,739	+		Pf6N2E2_4344	0.78	+0.5
5,071,739	+		Pf6N2E2_4344	0.78	-0.5
5,071,740	-		Pf6N2E2_4344	0.78	-0.0
5,071,740	-		Pf6N2E2_4344	0.78	+0.5
5,072,147	+				+0.5
5,072,148	-				-0.5
5,072,148	-				-0.3
5,072,148	-				-0.5
5,072,148	-				+0.5
5,072,216	+				-0.5
5,072,405	+				+0.5
5,072,405	+				-0.5
5,072,405	+				+0.5
5,072,406	-				+1.8
5,072,406	-				-0.3
5,072,406	-				-1.2
5,072,406	-				-1.1
5,072,475	+				-0.5
5,072,485	+				+0.5
5,072,565	+		Pf6N2E2_4345	0.18	-0.5
5,072,565	+		Pf6N2E2_4345	0.18	-0.5
5,072,565	+		Pf6N2E2_4345	0.18	-0.2
5,072,566	-		Pf6N2E2_4345	0.18	+0.6
5,072,566	-		Pf6N2E2_4345	0.18	-0.6
5,072,716	+		Pf6N2E2_4345	0.39	-0.8
5,072,717	-		Pf6N2E2_4345	0.39	-0.0
5,072,717	-		Pf6N2E2_4345	0.39	-0.5
5,072,717	-		Pf6N2E2_4345	0.39	+0.5
5,072,839	-		Pf6N2E2_4345	0.56	+0.5
5,073,664	+		Pf6N2E2_4346	0.43	-1.1
5,073,664	+		Pf6N2E2_4346	0.43	-0.7
5,073,664	+		Pf6N2E2_4346	0.43	-0.5
5,073,664	+		Pf6N2E2_4346	0.43	-0.5
5,073,664	+		Pf6N2E2_4346	0.43	-0.5
5,073,665	-		Pf6N2E2_4346	0.43	+0.5
5,073,834	+		Pf6N2E2_4346	0.57	-0.5
5,073,834	+		Pf6N2E2_4346	0.57	+0.5
5,073,834	+		Pf6N2E2_4346	0.57	-1.1
5,073,834	+		Pf6N2E2_4346	0.57	+0.2
5,073,834	+		Pf6N2E2_4346	0.57	+0.5
5,073,835	-		Pf6N2E2_4346	0.57	-0.5
5,073,835	-		Pf6N2E2_4346	0.57	-0.5
5,073,873	+		Pf6N2E2_4346	0.60	-0.5
5,074,038	-		Pf6N2E2_4346	0.74	-1.8
5,074,119	+		Pf6N2E2_4346	0.81	-1.1
5,074,119	+		Pf6N2E2_4346	0.81	-0.5
5,074,120	-		Pf6N2E2_4346	0.81	-1.1
5,074,120	-		Pf6N2E2_4346	0.81	+0.5
5,074,120	-		Pf6N2E2_4346	0.81	+0.5
5,074,120	-		Pf6N2E2_4346	0.81	+0.1