Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3433

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
3,989,685	+				+0.4
3,989,686	-				+0.4
3,989,686	-				-0.6
3,989,686	-				+0.4
3,989,693	+				+0.4
3,989,731	+				-0.6
3,989,732	-				+0.4
3,989,738	-				+1.4
3,989,747	+				-0.6
3,989,953	-		Pf6N2E2_3432	0.30	-0.4
3,990,017	+		Pf6N2E2_3432	0.39	+0.4
3,990,017	+		Pf6N2E2_3432	0.39	+0.4
3,990,018	-		Pf6N2E2_3432	0.39	+0.4
3,990,018	-		Pf6N2E2_3432	0.39	+0.4
3,990,056	+		Pf6N2E2_3432	0.45	-0.6
3,990,057	-		Pf6N2E2_3432	0.45	+0.4
3,990,480	+				+0.4
3,990,480	+				-1.2
3,990,561	-				+0.4
3,990,595	+				-0.6
3,990,595	+				-0.6
3,990,595	+				-1.2
3,990,595	+				-0.0
3,990,596	-				+0.4
3,990,596	-				-0.6
3,990,596	-				-1.2
3,990,596	-				-2.2
3,990,596	-				-0.6
3,990,596	-				+0.4
3,990,596	-				-0.4
3,990,596	-				+0.4
3,990,615	+				-0.5
3,990,616	-				-0.6
3,990,616	-				+0.4
3,990,682	+				+0.4
3,990,682	+				+0.4
3,990,682	+				+0.4
3,990,683	-				+0.4
3,990,683	-				+0.4
3,990,872	+		Pf6N2E2_3433	0.10	+0.4
3,990,873	-		Pf6N2E2_3433	0.10	-0.6
3,990,873	-		Pf6N2E2_3433	0.10	-0.6
3,990,873	-		Pf6N2E2_3433	0.10	-1.2
3,990,873	-		Pf6N2E2_3433	0.10	+0.4
3,990,873	-		Pf6N2E2_3433	0.10	-0.6
3,991,023	-		Pf6N2E2_3433	0.18	-0.6
3,991,070	-		Pf6N2E2_3433	0.20	-1.2
3,991,070	-		Pf6N2E2_3433	0.20	+0.4
3,991,070	-		Pf6N2E2_3433	0.20	-1.2
3,991,104	+		Pf6N2E2_3433	0.22	+0.4
3,991,109	+		Pf6N2E2_3433	0.23	+0.4
3,991,109	+		Pf6N2E2_3433	0.23	-1.2
3,991,109	+		Pf6N2E2_3433	0.23	-0.6
3,991,110	-		Pf6N2E2_3433	0.23	-1.2
3,991,110	-		Pf6N2E2_3433	0.23	-0.6
3,991,110	-		Pf6N2E2_3433	0.23	-1.2
3,991,110	-		Pf6N2E2_3433	0.23	+0.4
3,991,110	-		Pf6N2E2_3433	0.23	+0.4
3,991,651	+		Pf6N2E2_3433	0.51	-0.8
3,991,652	-		Pf6N2E2_3433	0.51	-0.6
3,991,652	-		Pf6N2E2_3433	0.51	-0.6
3,992,643	+				+0.4
3,992,643	+				+0.4
3,992,644	-				+0.4
3,992,644	-				-1.3
3,992,649	+				-0.6
3,992,757	+				+0.4
3,992,757	+				+0.4
3,992,787	+				+0.4
3,992,788	-				-0.6
3,992,788	-				-0.5
3,992,788	-				+0.4
3,992,808	-				-0.6
3,992,808	-				+0.4
3,992,808	-				-0.8
3,992,808	-				-0.6
3,992,815	-				-0.5
3,992,819	+				+0.4
3,992,820	-				-0.6
3,992,820	-				-1.6
3,992,820	-				-0.9
3,992,820	-				+0.4
3,992,861	+				-0.3
3,992,861	+				-0.6
3,992,909	-				-0.6
3,992,909	-				+1.6
3,993,152	-				-0.6
3,993,152	-				+0.4
3,993,152	-				-0.1
3,993,169	+				+2.4
3,993,170	-				+0.4
3,993,170	-				+0.4
3,993,193	+				-0.0
3,993,194	-				-0.9
3,993,280	+		Pf6N2E2_3434	0.13	+0.4
3,993,281	-		Pf6N2E2_3434	0.13	-0.6
3,993,373	+		Pf6N2E2_3434	0.16	+0.4
3,993,373	+		Pf6N2E2_3434	0.16	+0.4
3,993,374	-		Pf6N2E2_3434	0.16	+1.4
3,993,374	-		Pf6N2E2_3434	0.16	-1.2