Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16280

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
3,696,135	+		PFLU_RS16275	0.53	-0.5
3,696,136	-		PFLU_RS16275	0.53	+0.7
3,696,235	+		PFLU_RS16275	0.65	-0.7
3,696,235	+		PFLU_RS16275	0.65	+1.3
3,696,235	+		PFLU_RS16275	0.65	+0.5
3,696,235	+		PFLU_RS16275	0.65	-0.4
3,696,235	+		PFLU_RS16275	0.65	+0.2
3,696,236	-		PFLU_RS16275	0.66	-0.5
3,696,289	-		PFLU_RS16275	0.72	-1.7
3,696,361	+		PFLU_RS16275	0.81	-2.6
3,696,361	+		PFLU_RS16275	0.81	+0.6
3,696,376	+		PFLU_RS16275	0.83	+0.6
3,696,376	+		PFLU_RS16275	0.83	+1.7
3,696,376	+		PFLU_RS16275	0.83	+0.1
3,696,376	+		PFLU_RS16275	0.83	-0.2
3,696,479	+				+1.3
3,696,479	+				+0.4
3,696,479	+				+0.4
3,696,479	+				+0.7
3,696,480	-				-0.6
3,696,480	-				+1.8
3,696,480	-				-2.5
3,696,480	-				+0.1
3,696,551	+				+1.5
3,696,552	-				-0.9
3,696,579	+				+0.4
3,696,579	+				+0.5
3,696,638	+				-0.6
3,696,639	-				-0.9
3,696,658	-				-0.9
3,696,674	-				+0.7
3,696,756	+				-0.5
3,696,761	+				+1.5
3,696,786	+				-1.3
3,696,787	-				-0.9
3,696,787	-				-2.3
3,696,787	-				-0.1
3,696,806	+				+1.9
3,696,806	+				+0.2
3,696,822	+				+3.7
3,696,823	-				+0.3
3,696,823	-				-1.2
3,696,846	+				+4.1
3,696,847	-				-0.3
3,696,847	-				-1.1
3,696,847	-				-1.1
3,696,870	+				+1.3
3,696,870	+				+0.5
3,696,870	+				-0.3
3,696,871	-				+0.2
3,696,871	-				-1.5
3,696,889	-				-2.6
3,696,889	-				+0.2
3,696,918	-				+2.3
3,696,946	-				-0.5
3,696,946	-				-1.5
3,696,946	-				-1.2
3,696,955	+				+0.1
3,696,955	+				-0.3
3,696,955	+				+0.3
3,696,955	+				-1.2
3,696,956	-				+2.4
3,696,956	-				+0.4
3,696,956	-				-1.2
3,696,956	-				-1.2
3,696,956	-				-0.3
3,696,956	-				-2.2
3,696,956	-				-1.1
3,696,957	+				-0.9
3,696,957	+				+1.8
3,696,957	+				-1.9
3,696,958	-				+1.1
3,696,958	-				+1.1
3,696,970	-				+1.5
3,696,970	-				+0.1
3,696,986	+				-0.3
3,696,987	-				+1.1
3,696,989	+				-2.5
3,696,990	-				+1.8
3,696,990	-				+1.5
3,696,990	-				+0.9
3,696,990	-				-0.5
3,696,990	-				+0.8
3,696,990	-				+1.3
3,697,009	+				-0.3
3,697,062	+				-0.9
3,697,062	+				+0.7
3,697,062	+				-2.6
3,697,062	+				+0.8
3,697,062	+				+0.9
3,697,062	+				+0.1
3,697,062	+				+3.4
3,697,063	-				+0.9
3,697,063	-				+0.9
3,697,063	-				-0.1
3,697,063	-				-0.8
3,697,063	-				-1.5
3,697,063	-				+0.7
3,697,079	+				-1.2
3,697,079	+				-0.7
3,697,079	+				-1.9
3,697,079	+				-0.3
3,697,079	+				-2.2
3,697,079	+				+0.1
3,697,079	+				+1.1
3,697,079	+				+0.1
3,697,079	+				+0.6
3,697,080	-				-1.2
3,697,080	-				+0.1
3,697,080	-				-0.7
3,697,080	-				-0.9
3,697,080	-				-2.3
3,697,080	-				+1.1
3,697,087	+				+0.6
3,697,104	+				-0.9
3,697,264	+		PFLU_RS16280	0.31	+2.1
3,697,264	+		PFLU_RS16280	0.31	+2.7
3,697,264	+		PFLU_RS16280	0.31	+1.7
3,697,264	+		PFLU_RS16280	0.31	+0.1
3,697,264	+		PFLU_RS16280	0.31	+2.3
3,697,264	+		PFLU_RS16280	0.31	-0.0
3,697,264	+		PFLU_RS16280	0.31	+1.1
3,697,264	+		PFLU_RS16280	0.31	+2.8
3,697,264	+		PFLU_RS16280	0.31	+0.7
3,697,264	+		PFLU_RS16280	0.31	-1.4
3,697,264	+		PFLU_RS16280	0.31	-0.5
3,697,264	+		PFLU_RS16280	0.31	+0.4
3,697,264	+		PFLU_RS16280	0.31	-0.0
3,697,264	+		PFLU_RS16280	0.31	+1.1
3,697,265	-		PFLU_RS16280	0.31	-1.0
3,697,265	-		PFLU_RS16280	0.31	+1.5
3,697,265	-		PFLU_RS16280	0.31	-0.4
3,697,265	-		PFLU_RS16280	0.31	-1.8
3,697,265	-		PFLU_RS16280	0.31	+1.3
3,697,265	-		PFLU_RS16280	0.31	+1.2
3,697,265	-		PFLU_RS16280	0.31	+0.2
3,697,265	-		PFLU_RS16280	0.31	-0.2
3,697,266	+		PFLU_RS16280	0.31	+1.7
3,697,267	-		PFLU_RS16280	0.31	+0.4
3,697,267	-		PFLU_RS16280	0.31	+0.5
3,697,291	+		PFLU_RS16280	0.35	+0.5
3,697,297	+		PFLU_RS16280	0.36	+2.1
3,697,297	+		PFLU_RS16280	0.36	+1.1
3,697,299	+		PFLU_RS16280	0.36	+0.1
3,697,299	+		PFLU_RS16280	0.36	+0.8
3,697,299	+		PFLU_RS16280	0.36	+1.6
3,697,299	+		PFLU_RS16280	0.36	+0.1
3,697,299	+		PFLU_RS16280	0.36	-0.2
3,697,299	+		PFLU_RS16280	0.36	-1.5
3,697,299	+		PFLU_RS16280	0.36	-0.5
3,697,299	+		PFLU_RS16280	0.36	+2.1
3,697,299	+		PFLU_RS16280	0.36	+1.4
3,697,299	+		PFLU_RS16280	0.36	-0.6
3,697,299	+		PFLU_RS16280	0.36	-1.6
3,697,299	+		PFLU_RS16280	0.36	+0.7
3,697,300	-		PFLU_RS16280	0.36	+0.1
3,697,300	-		PFLU_RS16280	0.36	+0.0
3,697,300	-		PFLU_RS16280	0.36	+3.1
3,697,300	-		PFLU_RS16280	0.36	+0.4
3,697,300	-		PFLU_RS16280	0.36	+3.4
3,697,300	-		PFLU_RS16280	0.36	-0.5
3,697,300	-		PFLU_RS16280	0.36	+0.6
3,697,300	-		PFLU_RS16280	0.36	-0.0
3,697,300	-		PFLU_RS16280	0.36	+0.1
3,697,300	-		PFLU_RS16280	0.36	-0.5
3,697,300	-		PFLU_RS16280	0.36	-1.5
3,697,300	-		PFLU_RS16280	0.36	-0.5
3,697,300	-		PFLU_RS16280	0.36	+0.1
3,697,300	-		PFLU_RS16280	0.36	-1.2
3,697,300	-		PFLU_RS16280	0.36	-2.2
3,697,322	+		PFLU_RS16280	0.40	-0.4
3,697,322	+		PFLU_RS16280	0.40	+1.1
3,697,323	-		PFLU_RS16280	0.40	-0.5
3,697,323	-		PFLU_RS16280	0.40	-1.2
3,697,367	+		PFLU_RS16280	0.46	+1.8
3,697,367	+		PFLU_RS16280	0.46	+0.7
3,697,367	+		PFLU_RS16280	0.46	-1.2
3,697,367	+		PFLU_RS16280	0.46	-0.3
3,697,367	+		PFLU_RS16280	0.46	+1.7
3,697,368	-		PFLU_RS16280	0.46	-1.8
3,697,393	+		PFLU_RS16280	0.50	-0.9
3,697,393	+		PFLU_RS16280	0.50	-0.0
3,697,393	+		PFLU_RS16280	0.50	-0.9
3,697,393	+		PFLU_RS16280	0.50	+1.7
3,697,393	+		PFLU_RS16280	0.50	+0.5
3,697,394	-		PFLU_RS16280	0.50	-0.1
3,697,399	-		PFLU_RS16280	0.51	+1.1
3,697,399	-		PFLU_RS16280	0.51	+1.1
3,697,416	+		PFLU_RS16280	0.54	+1.8
3,697,440	-		PFLU_RS16280	0.57	-0.9
3,697,440	-		PFLU_RS16280	0.57	-0.3
3,697,442	+		PFLU_RS16280	0.58	-0.1
3,697,442	+		PFLU_RS16280	0.58	+0.7
3,697,442	+		PFLU_RS16280	0.58	-0.6
3,697,442	+		PFLU_RS16280	0.58	+0.5
3,697,443	-		PFLU_RS16280	0.58	-0.2
3,697,443	-		PFLU_RS16280	0.58	+0.3
3,697,443	-		PFLU_RS16280	0.58	+1.4
3,697,443	-		PFLU_RS16280	0.58	+0.4
3,697,443	-		PFLU_RS16280	0.58	-0.3
3,697,474	+		PFLU_RS16280	0.62	+0.4
3,697,474	+		PFLU_RS16280	0.62	-0.8
3,697,474	+		PFLU_RS16280	0.62	+1.1
3,697,474	+		PFLU_RS16280	0.62	+0.5
3,697,475	-		PFLU_RS16280	0.62	-0.2
3,697,475	-		PFLU_RS16280	0.62	+0.3
3,697,475	-		PFLU_RS16280	0.62	+0.5
3,697,522	-		PFLU_RS16280	0.70	-1.2
3,697,525	+		PFLU_RS16280	0.70	-1.4
3,697,525	+		PFLU_RS16280	0.70	+0.5
3,697,525	+		PFLU_RS16280	0.70	-0.5
3,697,525	+		PFLU_RS16280	0.70	-0.5
3,697,525	+		PFLU_RS16280	0.70	-0.2
3,697,525	+		PFLU_RS16280	0.70	+0.1
3,697,525	+		PFLU_RS16280	0.70	+2.0
3,697,525	+		PFLU_RS16280	0.70	+1.1
3,697,525	+		PFLU_RS16280	0.70	-1.5
3,697,526	-		PFLU_RS16280	0.70	+1.1
3,697,526	-		PFLU_RS16280	0.70	-0.3
3,697,526	-		PFLU_RS16280	0.70	+0.4
3,697,526	-		PFLU_RS16280	0.70	-1.2
3,697,526	-		PFLU_RS16280	0.70	+0.1
3,697,526	-		PFLU_RS16280	0.70	+0.7
3,697,526	-		PFLU_RS16280	0.70	+0.5
3,697,526	-		PFLU_RS16280	0.70	+0.5
3,697,526	-		PFLU_RS16280	0.70	-0.7
3,697,526	-		PFLU_RS16280	0.70	-0.5
3,697,526	-		PFLU_RS16280	0.70	-1.3
3,697,531	+		PFLU_RS16280	0.71	+0.3
3,697,531	+		PFLU_RS16280	0.71	-0.9
3,697,531	+		PFLU_RS16280	0.71	+0.5
3,697,560	-		PFLU_RS16280	0.75	-1.2
3,697,560	-		PFLU_RS16280	0.75	+0.9
3,697,560	-		PFLU_RS16280	0.75	-1.1
3,697,645	+		PFLU_RS16280	0.88	-0.1
3,697,645	+		PFLU_RS16280	0.88	+1.1
3,697,645	+		PFLU_RS16280	0.88	+0.5
3,697,645	+		PFLU_RS16280	0.88	+0.7
3,697,646	-		PFLU_RS16280	0.88	-2.7
3,697,646	-		PFLU_RS16280	0.88	+0.7
3,697,681	+				-0.7
3,697,682	-				+0.4
3,697,694	-				+0.9
3,697,694	-				+0.3
3,697,713	+				-1.7
3,697,713	+				-0.9
3,697,714	-				+0.1
3,697,725	+				+0.1
3,697,726	-				+0.2
3,697,765	+				-1.2
3,697,772	+				-1.2
3,697,772	+				+0.4
3,697,817	+				+0.7
3,697,877	-		PFLU_RS16285	0.16	+1.1
3,697,913	-		PFLU_RS16285	0.21	-0.3
3,697,946	+		PFLU_RS16285	0.26	-0.1
3,697,972	+		PFLU_RS16285	0.30	-0.5
3,698,054	+		PFLU_RS16285	0.43	+0.8
3,698,077	-		PFLU_RS16285	0.47	+0.5
3,698,149	-		PFLU_RS16285	0.58	+0.1
3,698,178	+		PFLU_RS16285	0.62	+0.1
3,698,270	+		PFLU_RS16285	0.76	+0.1
3,698,319	-		PFLU_RS16285	0.84	+0.7
3,698,319	-		PFLU_RS16285	0.84	+3.1
3,698,321	+		PFLU_RS16285	0.84	+1.1
3,698,322	-		PFLU_RS16285	0.84	-0.1
3,698,322	-		PFLU_RS16285	0.84	+1.0
3,698,378	+				-1.2
3,698,378	+				-0.1
3,698,379	-				+0.1
3,698,408	+				+1.4
3,698,409	-				+0.4
3,698,513	-				-1.1
3,698,513	-				+0.6
3,698,537	+				+0.3
3,698,545	+				+1.1
3,698,596	+				-0.5
3,698,597	-				+2.9
3,698,597	-				+2.4
3,698,685	-				-0.5