Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11320

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
2,506,569	+		PFLU_RS11315	0.33	+1.6
2,506,569	+		PFLU_RS11315	0.33	+0.3
2,506,570	-		PFLU_RS11315	0.34	-0.5
2,506,632	+		PFLU_RS11315	0.38	+1.3
2,506,632	+		PFLU_RS11315	0.38	+0.1
2,506,633	-		PFLU_RS11315	0.39	-2.2
2,506,633	-		PFLU_RS11315	0.39	-0.5
2,506,635	+		PFLU_RS11315	0.39	-0.7
2,506,635	+		PFLU_RS11315	0.39	-1.5
2,506,635	+		PFLU_RS11315	0.39	+1.2
2,506,635	+		PFLU_RS11315	0.39	-2.7
2,506,635	+		PFLU_RS11315	0.39	+0.6
2,506,635	+		PFLU_RS11315	0.39	-1.3
2,506,636	-		PFLU_RS11315	0.39	-1.1
2,506,636	-		PFLU_RS11315	0.39	-0.7
2,506,636	-		PFLU_RS11315	0.39	-0.9
2,506,636	-		PFLU_RS11315	0.39	-2.1
2,506,638	+		PFLU_RS11315	0.39	+1.1
2,506,638	+		PFLU_RS11315	0.39	+0.5
2,506,650	+		PFLU_RS11315	0.40	-0.1
2,506,650	+		PFLU_RS11315	0.40	+0.9
2,506,650	+		PFLU_RS11315	0.40	+0.1
2,506,651	-		PFLU_RS11315	0.40	+0.7
2,506,651	-		PFLU_RS11315	0.40	+0.4
2,506,680	+		PFLU_RS11315	0.42	-2.3
2,506,680	+		PFLU_RS11315	0.42	-0.1
2,506,680	+		PFLU_RS11315	0.42	-1.5
2,506,681	-		PFLU_RS11315	0.42	-2.5
2,506,681	-		PFLU_RS11315	0.42	-0.8
2,506,698	-		PFLU_RS11315	0.44	-0.3
2,506,700	+		PFLU_RS11315	0.44	-1.7
2,506,700	+		PFLU_RS11315	0.44	-0.9
2,506,700	+		PFLU_RS11315	0.44	+1.3
2,506,700	+		PFLU_RS11315	0.44	+0.3
2,506,701	-		PFLU_RS11315	0.44	+0.0
2,506,701	-		PFLU_RS11315	0.44	+1.1
2,506,701	-		PFLU_RS11315	0.44	-2.1
2,506,815	+		PFLU_RS11315	0.53	-1.7
2,506,816	-		PFLU_RS11315	0.53	-0.6
2,506,965	+		PFLU_RS11315	0.65	+2.3
2,506,965	+		PFLU_RS11315	0.65	-1.8
2,506,965	+		PFLU_RS11315	0.65	+0.1
2,506,966	-		PFLU_RS11315	0.65	-0.4
2,507,010	+		PFLU_RS11315	0.68	+2.7
2,507,010	+		PFLU_RS11315	0.68	-0.1
2,507,011	-		PFLU_RS11315	0.68	+0.7
2,507,035	-		PFLU_RS11315	0.70	-2.3
2,507,151	+		PFLU_RS11315	0.79	+0.6
2,507,200	-		PFLU_RS11315	0.83	-0.3
2,507,253	+		PFLU_RS11315	0.88	+0.2
2,507,254	-		PFLU_RS11315	0.88	-0.2
2,507,467	+				+0.9
2,507,479	+				-2.8
2,507,480	-				+0.3
2,507,492	-				+1.6
2,507,492	-				-0.2
2,507,492	-				+0.1
2,507,492	-				-1.9
2,507,492	-				-1.7
2,507,492	-				+0.5
2,507,542	+				+1.4
2,507,542	+				-2.4
2,507,542	+				+1.1
2,507,542	+				+0.0
2,507,542	+				+0.5
2,507,543	-				+1.0
2,507,543	-				-0.7
2,507,569	+				-2.0
2,507,569	+				+0.6
2,507,569	+				-0.3
2,507,570	-				+1.3
2,507,570	-				-2.3
2,507,570	-				-0.2
2,507,570	-				+0.7
2,507,570	-				+1.3
2,507,570	-				+0.8
2,507,570	-				+1.3
2,507,653	+				+0.5
2,508,127	+		PFLU_RS11320	0.27	-0.3
2,508,128	-		PFLU_RS11320	0.27	+0.8
2,508,352	+		PFLU_RS11320	0.37	-0.7
2,508,352	+		PFLU_RS11320	0.37	+0.7
2,508,352	+		PFLU_RS11320	0.37	+0.1
2,508,352	+		PFLU_RS11320	0.37	-1.0
2,508,352	+		PFLU_RS11320	0.37	+0.8
2,508,353	-		PFLU_RS11320	0.37	+2.1
2,508,353	-		PFLU_RS11320	0.37	+0.5
2,508,353	-		PFLU_RS11320	0.37	-0.3
2,508,353	-		PFLU_RS11320	0.37	+0.5
2,508,481	+		PFLU_RS11320	0.42	-0.7
2,508,481	+		PFLU_RS11320	0.42	+0.5
2,508,481	+		PFLU_RS11320	0.42	-0.1
2,508,482	-		PFLU_RS11320	0.42	+0.6
2,508,482	-		PFLU_RS11320	0.42	+1.3
2,508,482	-		PFLU_RS11320	0.42	+0.3
2,508,522	+		PFLU_RS11320	0.44	-0.3
2,508,535	+		PFLU_RS11320	0.44	-1.9
2,508,536	-		PFLU_RS11320	0.44	-2.2
2,508,568	+		PFLU_RS11320	0.46	-0.9
2,508,568	+		PFLU_RS11320	0.46	-0.9
2,508,568	+		PFLU_RS11320	0.46	-0.3
2,508,568	+		PFLU_RS11320	0.46	+1.7
2,508,568	+		PFLU_RS11320	0.46	-1.1
2,508,569	-		PFLU_RS11320	0.46	+0.1
2,508,569	-		PFLU_RS11320	0.46	+1.4
2,508,569	-		PFLU_RS11320	0.46	+2.3
2,508,569	-		PFLU_RS11320	0.46	+2.3
2,508,569	-		PFLU_RS11320	0.46	+1.2
2,508,569	-		PFLU_RS11320	0.46	+1.0
2,508,569	-		PFLU_RS11320	0.46	+1.9
2,508,625	+		PFLU_RS11320	0.48	+0.3
2,508,625	+		PFLU_RS11320	0.48	-0.6
2,508,626	-		PFLU_RS11320	0.48	+0.3
2,508,626	-		PFLU_RS11320	0.48	-1.1
2,508,626	-		PFLU_RS11320	0.48	-1.0
2,508,660	+		PFLU_RS11320	0.50	+1.1
2,508,660	+		PFLU_RS11320	0.50	-0.5
2,508,660	+		PFLU_RS11320	0.50	-0.3
2,508,660	+		PFLU_RS11320	0.50	-2.5
2,508,660	+		PFLU_RS11320	0.50	-0.7
2,508,660	+		PFLU_RS11320	0.50	+0.3
2,508,660	+		PFLU_RS11320	0.50	+0.8
2,508,660	+		PFLU_RS11320	0.50	-0.4
2,508,660	+		PFLU_RS11320	0.50	-0.4
2,508,660	+		PFLU_RS11320	0.50	+0.3
2,508,661	-		PFLU_RS11320	0.50	+0.3
2,508,661	-		PFLU_RS11320	0.50	+1.8
2,508,661	-		PFLU_RS11320	0.50	-0.5
2,508,661	-		PFLU_RS11320	0.50	+1.9
2,508,661	-		PFLU_RS11320	0.50	-0.3
2,508,661	-		PFLU_RS11320	0.50	+0.3
2,508,664	+		PFLU_RS11320	0.50	-1.7
2,508,664	+		PFLU_RS11320	0.50	+0.7
2,508,664	+		PFLU_RS11320	0.50	+0.3
2,508,664	+		PFLU_RS11320	0.50	+1.5
2,508,664	+		PFLU_RS11320	0.50	+0.8
2,508,664	+		PFLU_RS11320	0.50	+0.4
2,508,664	+		PFLU_RS11320	0.50	-2.2
2,508,665	-		PFLU_RS11320	0.50	-0.2
2,508,665	-		PFLU_RS11320	0.50	+0.5
2,508,665	-		PFLU_RS11320	0.50	-1.0
2,508,665	-		PFLU_RS11320	0.50	-0.9
2,508,665	-		PFLU_RS11320	0.50	+1.1
2,508,665	-		PFLU_RS11320	0.50	-0.4
2,508,665	-		PFLU_RS11320	0.50	+0.5
2,508,853	+		PFLU_RS11320	0.58	+1.3
2,508,854	-		PFLU_RS11320	0.58	-3.3
2,508,854	-		PFLU_RS11320	0.58	-2.5
2,508,854	-		PFLU_RS11320	0.58	+0.0
2,508,856	+		PFLU_RS11320	0.58	+0.6
2,508,856	+		PFLU_RS11320	0.58	+0.5
2,508,856	+		PFLU_RS11320	0.58	-0.6
2,508,856	+		PFLU_RS11320	0.58	-0.5
2,508,856	+		PFLU_RS11320	0.58	+1.3
2,508,857	-		PFLU_RS11320	0.58	+1.5
2,508,857	-		PFLU_RS11320	0.58	-0.3
2,508,857	-		PFLU_RS11320	0.58	-0.6
2,508,857	-		PFLU_RS11320	0.58	-1.0
2,508,857	-		PFLU_RS11320	0.58	-1.0
2,508,857	-		PFLU_RS11320	0.58	+0.1
2,508,857	-		PFLU_RS11320	0.58	+0.1
2,509,081	+		PFLU_RS11320	0.67	-0.6
2,509,081	+		PFLU_RS11320	0.67	+2.3
2,509,081	+		PFLU_RS11320	0.67	-0.6
2,509,082	-		PFLU_RS11320	0.67	-0.5
2,509,082	-		PFLU_RS11320	0.67	-0.0
2,509,082	-		PFLU_RS11320	0.67	-0.9
2,509,196	+		PFLU_RS11320	0.72	-1.3
2,509,197	-		PFLU_RS11320	0.72	-0.1
2,509,197	-		PFLU_RS11320	0.72	+0.8
2,509,197	-		PFLU_RS11320	0.72	-2.0
2,509,279	+		PFLU_RS11320	0.75	+0.8
2,509,279	+		PFLU_RS11320	0.75	+0.1
2,509,279	+		PFLU_RS11320	0.75	-0.3
2,509,279	+		PFLU_RS11320	0.75	+0.8
2,509,280	-		PFLU_RS11320	0.75	-1.7
2,509,291	-		PFLU_RS11320	0.76	-1.4
2,509,291	-		PFLU_RS11320	0.76	+0.1
2,509,291	-		PFLU_RS11320	0.76	+1.3
2,509,291	-		PFLU_RS11320	0.76	+0.3
2,509,301	+		PFLU_RS11320	0.76	-1.2
2,509,301	+		PFLU_RS11320	0.76	-0.5
2,509,302	-		PFLU_RS11320	0.76	+0.1
2,509,302	-		PFLU_RS11320	0.76	+1.4
2,509,366	+		PFLU_RS11320	0.79	-0.5
2,509,460	+		PFLU_RS11320	0.83	-0.1
2,509,460	+		PFLU_RS11320	0.83	-1.8
2,509,460	+		PFLU_RS11320	0.83	-1.2
2,509,460	+		PFLU_RS11320	0.83	-2.2
2,509,461	-		PFLU_RS11320	0.83	+1.3
2,509,461	-		PFLU_RS11320	0.83	+0.3
2,509,461	-		PFLU_RS11320	0.83	+0.1
2,509,461	-		PFLU_RS11320	0.83	-0.1
2,509,511	-		PFLU_RS11320	0.85	-0.0
2,509,565	+		PFLU_RS11320	0.87	-2.5
2,509,744	+				+1.5
2,509,744	+				+1.1
2,509,745	-				+0.5
2,509,833	+				+0.3
2,509,956	+				+1.1
2,509,956	+				-1.3
2,509,957	-				-2.0
2,509,961	+				+0.6
2,509,961	+				+0.4
2,509,961	+				-0.3
2,509,961	+				-0.5
2,509,961	+				+1.8
2,509,961	+				+0.1
2,509,961	+				-0.5
2,509,961	+				-1.9
2,509,962	-				-0.3
2,509,962	-				+0.7
2,509,962	-				+1.1
2,509,962	-				+0.4
2,509,962	-				+0.9
2,509,962	-				+1.7
2,509,962	-				-0.1
2,509,962	-				+0.7
2,509,962	-				-0.9
2,509,962	-				-0.5
2,509,962	-				-1.3
2,509,962	-				+0.7
2,509,964	+				-0.7
2,509,965	-				+1.0
2,509,965	-				+1.5
2,509,992	+				-0.8
2,509,992	+				+0.3
2,510,018	+				+0.1
2,510,018	+				+1.5
2,510,076	+				-2.7
2,510,076	+				-1.7
2,510,077	-				+3.4
2,510,084	-				+2.0
2,510,084	-				+1.3
2,510,084	-				-1.3
2,510,084	-				-1.3
2,510,084	-				+1.0
2,510,084	-				-0.3
2,510,084	-				-1.3
2,510,084	-				-1.9
2,510,560	+		PFLU_RS11325	0.56	+1.3
2,510,560	+		PFLU_RS11325	0.56	-0.9
2,510,560	+		PFLU_RS11325	0.56	-1.0
2,510,560	+		PFLU_RS11325	0.56	-0.3
2,510,560	+		PFLU_RS11325	0.56	+0.0
2,510,560	+		PFLU_RS11325	0.56	+1.3
2,510,560	+		PFLU_RS11325	0.56	+0.8
2,510,561	-		PFLU_RS11325	0.56	-0.5
2,510,561	-		PFLU_RS11325	0.56	-2.4
2,510,561	-		PFLU_RS11325	0.56	+3.6
2,510,561	-		PFLU_RS11325	0.56	+1.0
2,510,561	-		PFLU_RS11325	0.56	+3.9
2,510,561	-		PFLU_RS11325	0.56	-0.9
2,510,561	-		PFLU_RS11325	0.56	+0.5
2,510,561	-		PFLU_RS11325	0.56	-0.8
2,510,561	-		PFLU_RS11325	0.56	+1.4
2,510,561	-		PFLU_RS11325	0.56	-2.6
2,510,561	-		PFLU_RS11325	0.56	-1.0
2,510,644	+		PFLU_RS11325	0.67	+0.2
2,510,644	+		PFLU_RS11325	0.67	-1.8
2,510,645	-		PFLU_RS11325	0.67	+0.3
2,510,645	-		PFLU_RS11325	0.67	+3.2