Strain Fitness in Pseudomonas simiae WCS417 around PS417_14875

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,248,573	+				-0.6
3,248,573	+				+0.6
3,248,573	+				+2.8
3,248,574	-				-0.9
3,248,574	-				+1.7
3,248,574	-				-0.1
3,248,599	+				-1.0
3,248,665	-				-0.4
3,248,976	-		PS417_14870	0.36	+0.7
3,249,068	+		PS417_14870	0.46	-1.7
3,249,072	+		PS417_14870	0.47	-1.6
3,249,072	+		PS417_14870	0.47	+1.1
3,249,072	+		PS417_14870	0.47	-0.6
3,249,328	+		PS417_14870	0.75	+0.2
3,249,794	-		PS417_14875	0.45	-0.0
3,249,968	-		PS417_14875	0.77	+0.3
3,250,034	-		PS417_14875	0.88	+0.9
3,250,060	+				+1.1
3,250,061	-				+1.2
3,250,099	-				+0.3
3,250,099	-				-0.2
3,250,099	-				+3.0
3,250,193	+				+1.4
3,250,344	-		PS417_14880	0.23	-0.4
3,250,932	-		PS417_14885	0.18	-0.7
3,250,932	-		PS417_14885	0.18	+0.7
3,250,982	+		PS417_14885	0.24	-1.1
3,250,991	+		PS417_14885	0.25	-0.3
3,250,992	-		PS417_14885	0.25	+0.0
3,251,008	+		PS417_14885	0.27	-0.7
3,251,008	+		PS417_14885	0.27	-0.3