Strain Fitness in Agrobacterium fabrum C58 around Atu1363
Experiment: Streptomycin 200 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Streptomycin 200 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,357,701 | + | +0.2 | |||
| 1,357,824 | - | -0.6 | |||
| 1,357,906 | + | +1.0 | |||
| 1,357,935 | - | -0.1 | |||
| 1,358,013 | - | +1.4 | |||
| 1,358,038 | + | Atu1363 | 0.17 | +0.5 | |
| 1,358,812 | + | Atu1364 | 0.19 | -1.4 | |
| 1,358,927 | - | Atu1364 | 0.23 | +0.8 | |
| 1,358,988 | + | Atu1364 | 0.26 | +1.9 | |
| 1,359,068 | + | Atu1364 | 0.29 | +0.9 | |
| 1,359,311 | + | Atu1364 | 0.39 | -0.6 | |
| 1,359,311 | + | Atu1364 | 0.39 | +0.7 | |
| 1,359,319 | - | Atu1364 | 0.39 | -0.2 | |
| 1,359,326 | + | Atu1364 | 0.39 | +1.4 |
Or see this region's nucleotide sequence