Experiment: Timentin 6.25 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3296 and Atu3297 are separated by 1 nucleotides Atu3297 and Atu3298 are separated by 695 nucleotides
Atu3296: Atu3296 - two component response regulator for C4-dicarboxylate transport, at 321,688 to 323,052
Atu3296
Atu3297: Atu3297 - two component sensor kinase for C4-dicarboxylate transport, at 323,054 to 324,436
Atu3297
Atu3298: Atu3298 - C4-dicarboxylate transporter DctA, at 325,132 to 326,478
Atu3298
Position (kb) 323
324
325 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 322.136 kb on + strand, within Atu3296 at 322.168 kb on - strand, within Atu3296 at 322.228 kb on + strand, within Atu3296 at 322.233 kb on + strand, within Atu3296 at 322.241 kb on - strand, within Atu3296 at 322.355 kb on - strand, within Atu3296 at 322.423 kb on - strand, within Atu3296 at 322.492 kb on + strand, within Atu3296 at 322.500 kb on - strand, within Atu3296 at 322.500 kb on - strand, within Atu3296 at 322.500 kb on - strand, within Atu3296 at 322.596 kb on + strand, within Atu3296 at 323.018 kb on - strand at 323.071 kb on - strand at 323.163 kb on - strand at 323.186 kb on + strand at 323.295 kb on - strand, within Atu3297 at 323.365 kb on + strand, within Atu3297 at 323.474 kb on - strand, within Atu3297 at 323.476 kb on + strand, within Atu3297 at 323.484 kb on - strand, within Atu3297 at 323.484 kb on - strand, within Atu3297 at 323.484 kb on - strand, within Atu3297 at 323.484 kb on - strand, within Atu3297 at 323.629 kb on - strand, within Atu3297 at 323.729 kb on - strand, within Atu3297 at 323.733 kb on - strand, within Atu3297 at 323.743 kb on - strand, within Atu3297 at 323.898 kb on - strand, within Atu3297 at 323.980 kb on - strand, within Atu3297 at 324.026 kb on - strand, within Atu3297 at 324.097 kb on + strand, within Atu3297 at 324.100 kb on - strand, within Atu3297 at 324.111 kb on + strand, within Atu3297 at 324.140 kb on + strand, within Atu3297 at 324.163 kb on + strand, within Atu3297 at 324.224 kb on - strand, within Atu3297 at 324.240 kb on + strand, within Atu3297 at 324.278 kb on + strand, within Atu3297 at 324.281 kb on - strand, within Atu3297 at 324.333 kb on + strand at 324.487 kb on + strand at 324.549 kb on + strand at 324.566 kb on - strand at 324.702 kb on + strand at 324.710 kb on - strand at 324.727 kb on - strand at 324.802 kb on + strand at 324.810 kb on - strand at 324.829 kb on - strand at 324.876 kb on + strand at 325.049 kb on - strand at 325.049 kb on - strand at 325.092 kb on - strand at 325.312 kb on + strand, within Atu3298 at 325.410 kb on + strand, within Atu3298
Per-strain Table
Position Strand Gene LocusTag Fraction Timentin 6.25 ug/mL remove 322,136 + Atu3296 0.33 +0.5 322,168 - Atu3296 0.35 -0.1 322,228 + Atu3296 0.40 +0.6 322,233 + Atu3296 0.40 -0.1 322,241 - Atu3296 0.41 -0.8 322,355 - Atu3296 0.49 -0.6 322,423 - Atu3296 0.54 -0.2 322,492 + Atu3296 0.59 -0.5 322,500 - Atu3296 0.59 -0.1 322,500 - Atu3296 0.59 -1.4 322,500 - Atu3296 0.59 +1.8 322,596 + Atu3296 0.67 -0.2 323,018 - +1.2 323,071 - -0.2 323,163 - -0.5 323,186 + -0.4 323,295 - Atu3297 0.17 -0.7 323,365 + Atu3297 0.22 +0.2 323,474 - Atu3297 0.30 +0.4 323,476 + Atu3297 0.31 -0.2 323,484 - Atu3297 0.31 -2.0 323,484 - Atu3297 0.31 -0.0 323,484 - Atu3297 0.31 -0.2 323,484 - Atu3297 0.31 +0.3 323,629 - Atu3297 0.42 +0.3 323,729 - Atu3297 0.49 +0.0 323,733 - Atu3297 0.49 -0.5 323,743 - Atu3297 0.50 -0.8 323,898 - Atu3297 0.61 -0.1 323,980 - Atu3297 0.67 -0.3 324,026 - Atu3297 0.70 +0.2 324,097 + Atu3297 0.75 -0.6 324,100 - Atu3297 0.76 -1.6 324,111 + Atu3297 0.76 +0.2 324,140 + Atu3297 0.79 -1.2 324,163 + Atu3297 0.80 -0.9 324,224 - Atu3297 0.85 +0.4 324,240 + Atu3297 0.86 +0.0 324,278 + Atu3297 0.89 +0.3 324,281 - Atu3297 0.89 -1.1 324,333 + +0.1 324,487 + -1.1 324,549 + -0.2 324,566 - +0.0 324,702 + -0.7 324,710 - +0.2 324,727 - +0.1 324,802 + -0.5 324,810 - +0.2 324,829 - -0.1 324,876 + +1.9 325,049 - +2.8 325,049 - +0.2 325,092 - -1.9 325,312 + Atu3298 0.13 -0.6 325,410 + Atu3298 0.21 -0.4
Or see this region's nucleotide sequence