Strain Fitness in Agrobacterium fabrum C58 around Atu1388

Experiment: Chloramphenicol 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 12.5 ug/mL
1,381,300	-				+1.0
1,381,357	-				-2.0
1,381,372	-				-0.2
1,381,372	-				-0.5
1,381,431	-				-0.5
1,381,739	-		Atu1387	0.36	-0.2
1,381,861	-		Atu1387	0.53	-0.2
1,382,038	-		Atu1387	0.78	+2.2
1,382,257	-				+1.7
1,382,492	-		Atu1388	0.37	-0.4
1,382,532	+		Atu1388	0.42	+0.2
1,382,591	+		Atu1388	0.49	-0.7
1,382,591	+		Atu1388	0.49	-2.7
1,382,630	+		Atu1388	0.54	-1.2
1,382,644	-		Atu1388	0.56	+0.7
1,382,668	-		Atu1388	0.59	+0.5
1,382,678	-		Atu1388	0.60	-0.7
1,382,678	-		Atu1388	0.60	-2.8
1,382,751	+		Atu1388	0.70	-0.1
1,382,769	+		Atu1388	0.72	-0.0
1,382,930	-				-1.7
1,383,040	+				-1.3
1,383,313	+		Atu1389	0.36	-1.1
1,383,319	+		Atu1389	0.37	+0.1
1,383,328	+		Atu1389	0.39	+1.1
1,383,352	+		Atu1389	0.42	+1.2
1,383,439	+		Atu1389	0.55	-1.4
1,383,445	+		Atu1389	0.56	-2.2
1,383,450	+		Atu1389	0.57	-0.1
1,383,450	+		Atu1389	0.57	-0.5
1,383,504	-		Atu1389	0.65	+0.3
1,383,530	+		Atu1389	0.69	-1.9
1,383,630	+		Atu1389	0.83	-0.2
1,383,664	-		Atu1389	0.89	+0.4
1,383,805	-		Atu1390	0.10	-1.9
1,383,898	+		Atu1390	0.24	+1.3