Strain Fitness in Agrobacterium fabrum C58 around Atu1298
Experiment: Chloramphenicol 12.5 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 12.5 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,287,361 | + | Atu1297 | 0.41 | -0.6 | |
| 1,287,374 | - | Atu1297 | 0.42 | -1.2 | |
| 1,287,536 | + | Atu1297 | 0.54 | +0.7 | |
| 1,287,536 | + | Atu1297 | 0.54 | -1.1 | |
| 1,287,544 | - | Atu1297 | 0.54 | -2.0 | |
| 1,287,544 | - | Atu1297 | 0.54 | +0.5 | |
| 1,287,544 | - | Atu1297 | 0.54 | +0.2 | |
| 1,287,606 | + | Atu1297 | 0.59 | -0.8 | |
| 1,287,728 | - | Atu1297 | 0.68 | +0.9 | |
| 1,287,791 | + | Atu1297 | 0.73 | -0.0 | |
| 1,287,894 | - | Atu1297 | 0.80 | +1.3 | |
| 1,287,949 | - | Atu1297 | 0.84 | +0.9 | |
| 1,288,185 | + | +1.1 | |||
| 1,288,381 | - | -0.6 | |||
| 1,288,598 | + | -0.3 | |||
| 1,288,790 | + | -0.8 |
Or see this region's nucleotide sequence