Strain Fitness in Agrobacterium fabrum C58 around Atu1508

Experiment: Hygromycin B 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hygromycin B 12.5 ug/mL
1,498,989	-				+0.8
1,499,010	+				-0.1
1,499,097	-		Atu1508	0.20	+0.3
1,499,112	+		Atu1508	0.22	+0.5
1,499,219	-		Atu1508	0.39	-3.5
1,499,227	-		Atu1508	0.41	+0.9
1,499,227	-		Atu1508	0.41	+0.3
1,499,261	-		Atu1508	0.46	-0.1
1,499,334	-		Atu1508	0.58	-0.3
1,499,439	+		Atu1508	0.74	+1.0
1,499,613	+				+2.7
1,499,676	-				+0.1
1,499,676	-				-0.5
1,499,793	-				+0.5
1,499,948	+		Atu1509	0.19	-0.2
1,499,953	+		Atu1509	0.19	-0.3
1,499,956	-		Atu1509	0.19	-0.4
1,500,135	+		Atu1509	0.35	-0.2
1,500,145	+		Atu1509	0.36	+1.4
1,500,146	-		Atu1509	0.36	-0.1
1,500,153	-		Atu1509	0.37	+0.1
1,500,220	-		Atu1509	0.42	-0.3
1,500,240	+		Atu1509	0.44	+0.5
1,500,400	+		Atu1509	0.58	-0.1
1,500,417	+		Atu1509	0.60	+0.0
1,500,483	+		Atu1509	0.65	+0.1
1,500,517	+		Atu1509	0.68	-1.9
1,500,556	-		Atu1509	0.72	+0.3