Strain Fitness in Agrobacterium fabrum C58 around Atu3111

Experiment: Erythromycin 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 12.5 ug/mL
119,673	+				+1.2
119,904	-		Atu3110	0.25	-0.6
119,937	+		Atu3110	0.30	-0.2
120,003	-		Atu3110	0.38	-0.3
120,029	+		Atu3110	0.41	+0.9
120,144	-		Atu3110	0.56	-1.3
120,154	-		Atu3110	0.57	+2.2
120,178	-		Atu3110	0.60	-0.1
120,178	-		Atu3110	0.60	-0.3
120,182	+		Atu3110	0.61	+0.7
120,189	-		Atu3110	0.62	-1.4
120,359	-		Atu3110	0.83	+0.2
120,377	+		Atu3110	0.85	-0.8
120,394	-		Atu3110	0.88	-1.8
120,506	-				-0.8
120,523	+				+0.7
120,528	+				-0.5
120,541	-				+0.2
120,655	-				-0.2
120,667	+				-0.3
120,685	+				+0.2
120,698	-				-0.5
120,737	-				-0.3
120,765	-				+0.2
120,798	+		Atu3111	0.12	+0.2
120,799	+		Atu3111	0.12	+0.2
120,807	-		Atu3111	0.13	+0.2
120,882	-		Atu3111	0.20	+0.0
120,882	-		Atu3111	0.20	-0.0
120,911	-		Atu3111	0.23	-0.2
120,965	+		Atu3111	0.28	-0.7
120,965	+		Atu3111	0.28	-0.4
120,965	+		Atu3111	0.28	-0.3
120,973	-		Atu3111	0.29	-0.8
120,973	-		Atu3111	0.29	-0.7
120,973	-		Atu3111	0.29	+0.2
120,973	-		Atu3111	0.29	+0.8
120,978	+		Atu3111	0.29	-0.1
121,023	-		Atu3111	0.33	-1.1
121,147	+		Atu3111	0.45	-0.3
121,155	-		Atu3111	0.46	+0.4
121,200	-		Atu3111	0.50	+2.8
121,363	+		Atu3111	0.65	-0.9
121,368	+		Atu3111	0.65	-0.0
121,546	-		Atu3111	0.82	-0.5
121,628	-		Atu3111	0.90	+0.7
121,655	+				-0.0
121,721	+				-0.2
121,723	+				+0.6
121,762	-				-1.7
121,762	-				-0.0
121,793	-				-0.3
121,986	+		Atu3112	0.18	-0.4
121,992	-		Atu3112	0.18	-0.8
121,994	+		Atu3112	0.19	+0.7
121,994	+		Atu3112	0.19	-0.1
122,002	-		Atu3112	0.20	+0.2
122,002	-		Atu3112	0.20	+1.2
122,008	-		Atu3112	0.20	+0.7
122,020	+		Atu3112	0.22	+0.1
122,048	+		Atu3112	0.25	+0.1
122,140	+		Atu3112	0.35	-1.2
122,157	+		Atu3112	0.37	+0.6
122,161	-		Atu3112	0.38	-0.5
122,203	+		Atu3112	0.42	+1.2
122,230	+		Atu3112	0.46	-0.0
122,391	-		Atu3112	0.64	-0.7
122,412	-		Atu3112	0.66	+0.4
122,412	-		Atu3112	0.66	+0.6
122,491	+		Atu3112	0.75	+0.1
122,493	-		Atu3112	0.76	+0.1
122,562	+		Atu3112	0.83	+0.1
122,589	+		Atu3112	0.87	-0.1
122,602	-		Atu3112	0.88	+1.5
122,620	+				-0.5
122,620	+				+0.8
122,620	+				+1.2
122,628	-				+0.5
122,630	+				-2.7
122,630	+				+0.2