Strain Fitness in Agrobacterium fabrum C58 around Atu2385

Experiment: Erythromycin 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 12.5 ug/mL
2,354,495	-		Atu2384	0.14	+0.9
2,354,539	-		Atu2384	0.21	+0.2
2,354,595	+		Atu2384	0.30	-0.1
2,354,849	+		Atu2384	0.69	+1.4
2,354,961	-		Atu2384	0.87	-0.6
2,354,963	+		Atu2384	0.87	+0.7
2,355,014	+				-1.7
2,355,022	-				-0.0
2,355,042	+				-0.8
2,355,063	-				-0.6
2,355,265	-				-0.2
2,355,295	+				+0.7
2,355,356	+				+0.2
2,355,356	+				-0.4
2,355,366	-				-0.0
2,355,437	+				+0.9
2,355,437	+				-0.5
2,355,447	+				+0.5
2,355,447	+				+0.6
2,355,447	+				+0.9
2,355,503	-		Atu2385	0.14	-1.0
2,355,668	+		Atu2385	0.28	+1.0
2,355,671	+		Atu2385	0.28	-0.6
2,355,679	-		Atu2385	0.29	-0.1
2,355,694	+		Atu2385	0.30	+0.2
2,355,778	-		Atu2385	0.37	+0.6
2,355,836	+		Atu2385	0.42	-0.5
2,355,862	+		Atu2385	0.44	+0.9
2,355,951	-		Atu2385	0.51	+0.5
2,355,957	-		Atu2385	0.51	+0.8
2,355,957	-		Atu2385	0.51	-0.6
2,356,164	+		Atu2385	0.68	+0.2
2,356,227	+		Atu2385	0.73	-0.6
2,356,239	-		Atu2385	0.74	+0.2
2,356,325	-		Atu2385	0.81	-0.3
2,356,358	-		Atu2385	0.84	-0.5
2,356,358	-		Atu2385	0.84	+0.1
2,356,359	-		Atu2385	0.84	-1.6
2,356,515	+				+0.2
2,356,525	+				+1.5
2,356,525	+				+0.2
2,356,527	+				-0.4
2,356,533	-				+1.8
2,356,609	-				-1.1
2,356,619	+				-0.1
2,356,621	-				+1.2
2,356,648	+				+1.2
2,356,648	+				+0.2
2,356,656	-				-0.4
2,356,656	-				-0.1
2,356,656	-				-0.4
2,356,716	-		Atu2386	0.11	-0.5
2,356,722	-		Atu2386	0.12	+0.6
2,356,875	-		Atu2386	0.22	-0.1
2,357,004	+		Atu2386	0.31	+0.1
2,357,006	+		Atu2386	0.31	-0.3
2,357,012	-		Atu2386	0.32	+0.1
2,357,062	+		Atu2386	0.35	-0.5
2,357,062	+		Atu2386	0.35	+0.4
2,357,070	-		Atu2386	0.36	-1.3
2,357,070	-		Atu2386	0.36	-0.0
2,357,070	-		Atu2386	0.36	-0.1
2,357,152	-		Atu2386	0.41	-0.7
2,357,202	+		Atu2386	0.45	-0.0
2,357,246	+		Atu2386	0.48	-1.0
2,357,254	-		Atu2386	0.48	+0.4
2,357,364	+		Atu2386	0.56	+1.0
2,357,433	+		Atu2386	0.60	-0.2
2,357,433	+		Atu2386	0.60	-0.8
2,357,441	-		Atu2386	0.61	+0.7
2,357,454	+		Atu2386	0.62	-0.2
2,357,535	-		Atu2386	0.67	-0.4
2,357,547	+		Atu2386	0.68	-0.2