Strain Fitness in Agrobacterium fabrum C58 around Atu5107

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
111,723	+				-0.5
111,769	+				+0.7
111,770	-				-2.2
111,803	-				-0.2
111,806	+				+0.5
111,867	+		Atu5105	0.24	-0.9
111,872	+		Atu5105	0.25	-1.0
111,880	-		Atu5105	0.26	+0.1
111,885	-		Atu5105	0.28	-1.8
112,067	+		Atu5105	0.69	+0.4
112,081	-		Atu5105	0.72	-0.6
112,084	-		Atu5105	0.73	-0.2
112,143	-		Atu5105	0.87	-0.2
112,157	-		Atu5105	0.90	-0.9
112,184	-				-1.5
112,216	+				+0.1
112,304	+				-0.2
112,363	+				+1.0
112,501	+		Atu5106	0.46	-0.8
112,517	-		Atu5106	0.53	-1.1
112,559	-		Atu5106	0.71	-0.0
112,702	-				-1.3
112,780	-		Atu5107	0.24	-2.1
112,858	-		Atu5107	0.49	-1.9
112,891	+		Atu5107	0.59	-0.8
112,982	-		Atu5107	0.88	-1.0
113,018	-				-0.1
113,074	-				-0.4
113,130	-				-0.9
113,155	+				-0.0
113,183	+				+0.0
113,188	+				-1.1
113,199	-				-0.8
113,294	+				-0.6
113,369	+				-0.4
113,374	+				-0.3
113,383	-				-1.0
113,383	-				-0.3
113,426	+				-0.6
113,476	+				-0.6
113,479	-				-0.3
113,493	+				-0.0
113,634	+				+0.5
113,644	+				-0.2
113,786	-		Atu5108	0.13	+2.1
113,810	+		Atu5108	0.14	-0.7
113,819	-		Atu5108	0.15	-1.3
113,839	+		Atu5108	0.16	-1.2
113,929	+		Atu5108	0.20	-1.0
113,956	+		Atu5108	0.22	+1.5
113,984	+		Atu5108	0.23	+1.1