Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2243

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
2,656,848	+		Pf6N2E2_2241	0.72	-1.2
2,656,848	+		Pf6N2E2_2241	0.72	+0.9
2,656,848	+		Pf6N2E2_2241	0.72	+0.9
2,657,074	+		Pf6N2E2_2241	0.89	-0.7
2,657,075	-		Pf6N2E2_2241	0.89	+0.9
2,657,075	-		Pf6N2E2_2241	0.89	-1.3
2,657,227	-				+0.9
2,657,247	+				+0.9
2,657,247	+				+0.9
2,657,247	+				+0.9
2,657,248	-				+0.9
2,657,588	+		Pf6N2E2_2242	0.84	-0.1
2,657,645	+				+0.9
2,657,645	+				+0.9
2,657,645	+				-1.9
2,657,645	+				-1.2
2,657,645	+				-0.1
2,657,645	+				-0.1
2,657,646	-				-0.3
2,657,646	-				-0.1
2,657,713	+				+0.9
2,657,749	+				+0.9
2,657,750	-				+0.9
2,657,750	-				+0.9
2,657,779	-				-0.1
2,657,870	+		Pf6N2E2_2243	0.26	+0.9
2,657,900	+		Pf6N2E2_2243	0.36	-0.1
2,657,900	+		Pf6N2E2_2243	0.36	+0.9
2,657,900	+		Pf6N2E2_2243	0.36	+0.9
2,657,901	-		Pf6N2E2_2243	0.36	+0.9
2,657,901	-				+0.9
2,657,901	-		Pf6N2E2_2243	0.36	-0.7
2,657,901	-		Pf6N2E2_2243	0.36	-0.1
2,657,901	-		Pf6N2E2_2243	0.36	-1.8
2,657,980	+		Pf6N2E2_2243	0.61	-0.1
2,657,980	+		Pf6N2E2_2243	0.61	+0.9
2,657,980	+		Pf6N2E2_2243	0.61	+0.9
2,657,980	+		Pf6N2E2_2243	0.61	-1.1
2,657,980	+		Pf6N2E2_2243	0.61	+0.9
2,657,981	-		Pf6N2E2_2243	0.61	+0.9
2,657,981	-		Pf6N2E2_2243	0.61	+0.9
2,657,981	-		Pf6N2E2_2243	0.61	+0.9
2,657,983	+		Pf6N2E2_2243	0.62	-2.6
2,657,984	-		Pf6N2E2_2243	0.62	+0.9
2,658,023	+		Pf6N2E2_2243	0.75	-0.1
2,658,023	+		Pf6N2E2_2243	0.75	+0.9
2,658,023	+		Pf6N2E2_2243	0.75	-0.1
2,658,023	+		Pf6N2E2_2243	0.75	-1.7
2,658,023	+		Pf6N2E2_2243	0.75	-0.7
2,658,023	+		Pf6N2E2_2243	0.75	-0.4
2,658,024	-		Pf6N2E2_2243	0.75	+0.9
2,658,024	-		Pf6N2E2_2243	0.75	+0.9
2,658,024	-		Pf6N2E2_2243	0.75	-0.1
2,658,024	-		Pf6N2E2_2243	0.75	+0.9
2,658,025	+		Pf6N2E2_2243	0.75	-0.1
2,658,025	+		Pf6N2E2_2243	0.75	-1.7
2,658,025	+		Pf6N2E2_2243	0.75	-0.1
2,658,075	-				+0.9
2,658,100	+				+0.9
2,658,220	+		Pf6N2E2_2244	0.40	-0.1
2,658,221	-				+0.9
2,658,353	+		Pf6N2E2_2244	0.86	-0.1
2,658,390	+				+0.9
2,658,418	+				+0.1
2,658,418	+				+0.9
2,658,418	+				-0.1
2,658,418	+				+0.9
2,658,418	+				+0.9
2,658,418	+				+0.9
2,658,418	+				-0.1
2,658,418	+				+0.9
2,658,419	-				-0.1
2,658,419	-				-1.0
2,658,419	-				+0.9
2,658,419	-				+0.9
2,658,419	-				+0.9
2,658,446	+				+0.9
2,658,491	+				+0.9
2,658,492	-				-0.1
2,658,492	-				+0.9
2,658,502	+				-1.2
2,658,502	+				-1.7
2,658,503	-				+0.9
2,658,503	-				+0.9
2,658,503	-				-1.1
2,658,503	-				-0.9
2,658,545	-				-0.4
2,658,633	+		Pf6N2E2_2245	0.22	-0.3
2,658,633	+		Pf6N2E2_2245	0.22	-0.1
2,658,643	-		Pf6N2E2_2245	0.24	-1.1
2,658,715	+		Pf6N2E2_2245	0.39	-0.7
2,658,715	+		Pf6N2E2_2245	0.39	+0.9
2,658,715	+		Pf6N2E2_2245	0.39	+0.9
2,658,715	+		Pf6N2E2_2245	0.39	+1.1
2,658,715	+		Pf6N2E2_2245	0.39	+0.9
2,658,715	+		Pf6N2E2_2245	0.39	+0.9
2,658,716	-		Pf6N2E2_2245	0.39	+0.3
2,658,716	-		Pf6N2E2_2245	0.39	-0.1
2,658,716	-		Pf6N2E2_2245	0.39	+0.9
2,658,744	+		Pf6N2E2_2245	0.45	+0.9
2,658,744	+		Pf6N2E2_2245	0.45	+0.9
2,658,750	+		Pf6N2E2_2245	0.46	+0.9
2,658,750	+		Pf6N2E2_2245	0.46	-0.7
2,658,750	+		Pf6N2E2_2245	0.46	-0.1
2,658,751	-		Pf6N2E2_2245	0.46	+0.9
2,658,751	-		Pf6N2E2_2245	0.46	-0.1
2,658,751	-		Pf6N2E2_2245	0.46	-0.9
2,658,751	-		Pf6N2E2_2245	0.46	-0.1
2,658,839	+		Pf6N2E2_2245	0.64	+0.9
2,658,839	+		Pf6N2E2_2245	0.64	-0.4
2,658,839	+		Pf6N2E2_2245	0.64	+0.9
2,658,839	+		Pf6N2E2_2245	0.64	-1.4
2,658,839	+		Pf6N2E2_2245	0.64	-0.7
2,658,839	+		Pf6N2E2_2245	0.64	-0.8
2,658,839	+		Pf6N2E2_2245	0.64	-0.7
2,658,839	+		Pf6N2E2_2245	0.64	+0.9
2,658,839	+		Pf6N2E2_2245	0.64	+0.9
2,658,840	-		Pf6N2E2_2245	0.64	-1.1
2,658,840	-		Pf6N2E2_2245	0.64	-0.1
2,658,840	-		Pf6N2E2_2245	0.64	+0.9
2,658,840	-		Pf6N2E2_2245	0.64	-0.9
2,658,840	-		Pf6N2E2_2245	0.64	-1.4
2,658,840	-		Pf6N2E2_2245	0.64	-0.3
2,658,840	-		Pf6N2E2_2245	0.64	+0.9
2,658,840	-		Pf6N2E2_2245	0.64	-0.1
2,658,840	-		Pf6N2E2_2245	0.64	-1.1
2,658,840	-		Pf6N2E2_2245	0.64	+0.9
2,658,840	-		Pf6N2E2_2245	0.64	+0.9
2,658,840	-		Pf6N2E2_2245	0.64	-1.9
2,658,840	-		Pf6N2E2_2245	0.64	+0.9
2,658,851	+		Pf6N2E2_2245	0.67	+0.9
2,658,851	+		Pf6N2E2_2245	0.67	-0.1
2,658,851	+		Pf6N2E2_2245	0.67	-0.1
2,658,851	+		Pf6N2E2_2245	0.67	-0.1
2,658,852	-		Pf6N2E2_2245	0.67	-0.1
2,658,852	-		Pf6N2E2_2245	0.67	-0.7
2,659,055	+				+0.9
2,659,056	-				-0.7
2,659,083	+				+0.9
2,659,084	-				-0.4
2,659,087	+				+0.9
2,659,088	-				-1.0
2,659,088	-				+0.3
2,659,088	-				+0.5