Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3643

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
4,241,101	+				+1.1
4,241,101	+				-0.0
4,241,102	-				-0.9
4,241,102	-				+1.1
4,241,102	-				+1.1
4,241,204	+				+0.1
4,241,204	+				+1.1
4,241,205	-				-0.5
4,241,205	-				+0.1
4,241,205	-				+1.1
4,241,213	+				-0.9
4,241,213	+				+1.1
4,241,214	-				+0.1
4,241,367	+		Pf6N2E2_3642	0.10	+1.1
4,241,610	+		Pf6N2E2_3642	0.43	+1.1
4,241,611	-		Pf6N2E2_3642	0.43	+0.1
4,241,626	+		Pf6N2E2_3642	0.45	+0.1
4,241,627	-		Pf6N2E2_3642	0.45	+1.1
4,241,627	-		Pf6N2E2_3642	0.45	-1.2
4,241,627	-		Pf6N2E2_3642	0.45	+0.1
4,241,627	-		Pf6N2E2_3642	0.45	-2.0
4,241,670	+		Pf6N2E2_3642	0.51	+1.1
4,241,670	+		Pf6N2E2_3642	0.51	+0.1
4,241,671	-		Pf6N2E2_3642	0.51	+1.1
4,241,721	+		Pf6N2E2_3642	0.58	+1.1
4,241,925	+		Pf6N2E2_3642	0.85	+1.1
4,241,925	+		Pf6N2E2_3642	0.85	-0.5
4,241,926	-		Pf6N2E2_3642	0.85	+0.1
4,242,029	+				-0.9
4,242,128	+				+1.1
4,242,128	+				+0.1
4,242,128	+				-0.0
4,242,129	-				+0.1
4,242,181	+		Pf6N2E2_3643	0.14	+1.1
4,242,182	-		Pf6N2E2_3643	0.14	+0.1
4,242,184	+		Pf6N2E2_3643	0.14	+1.1
4,242,184	+		Pf6N2E2_3643	0.14	+0.1
4,242,185	-		Pf6N2E2_3643	0.14	+0.1
4,242,285	-		Pf6N2E2_3643	0.22	+1.1
4,242,478	+		Pf6N2E2_3643	0.37	+0.5
4,242,479	-		Pf6N2E2_3643	0.37	+0.1
4,242,479	-		Pf6N2E2_3643	0.37	+0.2
4,242,479	-		Pf6N2E2_3643	0.37	-0.5
4,242,479	-		Pf6N2E2_3643	0.37	-0.2
4,242,479	-		Pf6N2E2_3643	0.37	-0.5
4,242,522	-		Pf6N2E2_3643	0.40	+0.7
4,242,760	-		Pf6N2E2_3643	0.58	-0.5
4,242,760	-		Pf6N2E2_3643	0.58	+0.1
4,242,760	-		Pf6N2E2_3643	0.58	+1.1
4,243,274	+				+0.6
4,243,274	+				-0.5
4,243,274	+				+1.1
4,243,275	-				+0.1
4,243,275	-				+1.1
4,243,275	-				+0.1
4,243,275	-				-0.9
4,243,275	-				+0.1
4,243,387	+				+0.1
4,243,523	+				+0.1
4,243,523	+				-0.5
4,243,524	-				-0.4
4,243,524	-				+1.1
4,243,725	-		Pf6N2E2_3644	0.11	-1.2
4,243,725	-		Pf6N2E2_3644	0.11	-0.8
4,243,868	+		Pf6N2E2_3644	0.19	+0.1
4,243,868	+		Pf6N2E2_3644	0.19	-0.9
4,243,869	-		Pf6N2E2_3644	0.19	-2.6
4,243,869	-		Pf6N2E2_3644	0.19	+0.6
4,243,869	-		Pf6N2E2_3644	0.19	-0.1
4,243,869	-		Pf6N2E2_3644	0.19	+0.1
4,243,869	-		Pf6N2E2_3644	0.19	+1.1
4,243,934	+		Pf6N2E2_3644	0.22	+2.1
4,244,039	+		Pf6N2E2_3644	0.28	+0.1
4,244,040	-		Pf6N2E2_3644	0.28	+1.1
4,244,040	-		Pf6N2E2_3644	0.28	+1.1
4,244,262	-		Pf6N2E2_3644	0.40	-2.1