Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2834

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
3,322,545	+				+1.0
3,322,545	+				-0.8
3,322,546	-				+0.0
3,322,546	-				+1.0
3,322,546	-				+1.0
3,322,572	-				+1.0
3,322,572	-				+1.6
3,322,572	-				+0.0
3,322,602	+				+1.0
3,322,640	-				-0.6
3,322,640	-				+1.0
3,322,640	-				+1.0
3,322,686	+				+1.0
3,322,730	+				+1.0
3,322,730	+				+0.0
3,322,730	+				-0.6
3,322,730	+				-0.3
3,322,731	-				+1.0
3,322,731	-				+0.0
3,322,731	-				+1.0
3,322,747	-				-2.3
3,322,747	-				-0.6
3,322,747	-				+1.0
3,322,747	-				-0.1
3,322,747	-				-0.3
3,322,754	+				-0.6
3,322,754	+				+0.2
3,322,754	+				+0.0
3,322,755	-				-0.8
3,322,853	-				-0.2
3,322,985	-		Pf6N2E2_2833	0.10	-1.0
3,323,086	+		Pf6N2E2_2833	0.28	+1.0
3,323,199	-		Pf6N2E2_2833	0.48	-0.6
3,323,199	-		Pf6N2E2_2833	0.48	-1.0
3,323,293	+		Pf6N2E2_2833	0.65	+0.0
3,323,293	+		Pf6N2E2_2833	0.65	+0.0
3,323,293	+		Pf6N2E2_2833	0.65	+1.0
3,323,294	-		Pf6N2E2_2833	0.65	+0.0
3,323,294	-		Pf6N2E2_2833	0.65	+1.0
3,323,294	-		Pf6N2E2_2833	0.65	-1.6
3,323,294	-		Pf6N2E2_2833	0.65	+1.0
3,323,449	+				-1.0
3,323,449	+				-1.0
3,323,450	-				+1.0
3,323,450	-				+1.0
3,323,453	-				-0.9
3,323,453	-				+1.0
3,323,495	+				-1.2
3,323,495	+				+0.0
3,323,495	+				-1.0
3,323,495	+				+1.0
3,323,495	+				+1.0
3,323,496	-				+0.0
3,323,496	-				+1.0
3,323,496	-				-1.0
3,323,496	-				+1.0
3,323,496	-				+1.0
3,323,496	-				+1.0
3,323,496	-				-1.0
3,323,558	+				+1.0
3,323,672	+		Pf6N2E2_2834	0.25	-1.7
3,323,672	+		Pf6N2E2_2834	0.25	-1.6
3,323,672	+		Pf6N2E2_2834	0.25	-2.5
3,323,673	-		Pf6N2E2_2834	0.25	+1.0
3,323,673	-		Pf6N2E2_2834	0.25	+0.0
3,323,673	-		Pf6N2E2_2834	0.25	-0.9
3,323,673	-		Pf6N2E2_2834	0.25	-1.5
3,323,673	-		Pf6N2E2_2834	0.25	-1.6
3,323,885	+		Pf6N2E2_2834	0.55	+1.0
3,323,885	+		Pf6N2E2_2834	0.55	+1.0
3,323,886	-		Pf6N2E2_2834	0.56	+0.0
3,324,146	+				-1.0
3,324,146	+				-0.4
3,324,218	+				+0.0
3,324,218	+				+1.0
3,324,219	-				+1.0
3,324,219	-				-1.2
3,324,221	+				+1.0
3,324,221	+				+0.0
3,324,221	+				+0.3
3,324,222	-				+1.0
3,324,224	+				+0.0
3,324,224	+				-1.0
3,324,225	-				+1.0
3,324,225	-				+0.0
3,324,225	-				+1.0
3,324,919	-		Pf6N2E2_2835	0.57	+1.0
3,324,919	-		Pf6N2E2_2835	0.57	-0.8
3,324,935	-		Pf6N2E2_2835	0.58	+1.0
3,324,966	+		Pf6N2E2_2835	0.61	+1.0