Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1526

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
1,783,087	-		Pf6N2E2_1525	0.28	-0.6
1,783,135	-				+0.8
1,783,434	+		Pf6N2E2_1525	0.66	+0.8
1,783,435	-		Pf6N2E2_1525	0.66	+0.5
1,783,435	-		Pf6N2E2_1525	0.66	+0.2
1,783,435	-		Pf6N2E2_1525	0.66	+0.8
1,783,552	-		Pf6N2E2_1525	0.79	-0.4
1,783,633	+		Pf6N2E2_1525	0.88	-0.2
1,783,633	+		Pf6N2E2_1525	0.88	+0.8
1,783,634	-		Pf6N2E2_1525	0.88	+0.8
1,783,722	-				-0.2
1,783,722	-				-2.3
1,783,772	+				+0.8
1,783,773	-				+0.8
1,783,911	+				+0.8
1,783,915	+				+0.8
1,783,915	+				+0.8
1,784,266	+		Pf6N2E2_1526	0.34	-0.2
1,784,267	-		Pf6N2E2_1526	0.34	-0.2
1,784,267	-		Pf6N2E2_1526	0.34	+0.8
1,784,275	-		Pf6N2E2_1526	0.35	-0.2
1,784,275	-		Pf6N2E2_1526	0.35	+0.8
1,784,503	+		Pf6N2E2_1526	0.53	+0.8
1,784,602	+		Pf6N2E2_1526	0.61	-1.2
1,784,603	-		Pf6N2E2_1526	0.61	-1.3
1,784,603	-		Pf6N2E2_1526	0.61	+0.8
1,784,809	-		Pf6N2E2_1526	0.77	-1.5
1,784,972	+				+0.8
1,784,972	+				-1.2
1,784,973	-				-0.6
1,785,258	-				-0.8
1,785,258	-				+0.8
1,785,355	+				-0.2
1,785,355	+				+0.8
1,785,457	+		Pf6N2E2_1527	0.12	-0.2
1,785,458	-		Pf6N2E2_1527	0.12	+0.8
1,785,458	-		Pf6N2E2_1527	0.12	+0.6
1,785,458	-		Pf6N2E2_1527	0.12	-1.5
1,785,458	-		Pf6N2E2_1527	0.12	+0.8
1,785,473	+		Pf6N2E2_1527	0.13	-0.2
1,785,932	+		Pf6N2E2_1527	0.63	+0.8
1,785,932	+		Pf6N2E2_1527	0.63	-0.1
1,785,932	+		Pf6N2E2_1527	0.63	-0.2
1,785,932	+		Pf6N2E2_1527	0.63	-0.7
1,785,932	+		Pf6N2E2_1527	0.63	+0.8
1,785,932	+		Pf6N2E2_1527	0.63	-0.2
1,785,932	+		Pf6N2E2_1527	0.63	+0.8
1,785,933	-		Pf6N2E2_1527	0.63	-0.2
1,785,933	-		Pf6N2E2_1527	0.63	-0.2
1,785,933	-		Pf6N2E2_1527	0.63	-0.2
1,785,933	-		Pf6N2E2_1527	0.63	+0.8
1,785,933	-		Pf6N2E2_1527	0.63	-0.4
1,785,933	-		Pf6N2E2_1527	0.63	+0.8
1,785,933	-		Pf6N2E2_1527	0.63	+0.8
1,785,968	+		Pf6N2E2_1527	0.67	+0.8
1,786,022	+		Pf6N2E2_1527	0.73	+0.8
1,786,023	-				-0.2