Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4343

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
5,067,652	+				+0.1
5,067,878	-				-2.4
5,067,878	-				-1.2
5,067,954	-				-1.1
5,067,959	+				+0.1
5,067,959	+				+1.1
5,067,959	+				+0.1
5,067,960	-				+1.1
5,067,960	-				-0.8
5,067,960	-				-0.5
5,068,107	+		Pf6N2E2_4342	0.23	+1.1
5,068,107	+		Pf6N2E2_4342	0.23	+1.1
5,068,107	+		Pf6N2E2_4342	0.23	+1.1
5,068,108	-		Pf6N2E2_4342	0.24	+1.1
5,068,108	-		Pf6N2E2_4342	0.24	-0.5
5,068,108	-		Pf6N2E2_4342	0.24	+1.1
5,068,191	-		Pf6N2E2_4342	0.36	+0.1
5,068,605	+				+1.1
5,068,605	+				-0.3
5,068,605	+				-1.2
5,068,606	-				+1.1
5,068,606	-				-0.2
5,068,606	-				+0.1
5,068,606	-				+0.1
5,068,606	-				-0.9
5,068,714	+		Pf6N2E2_4343	0.14	+1.1
5,068,758	+		Pf6N2E2_4343	0.20	-2.2
5,068,758	+		Pf6N2E2_4343	0.20	-1.5
5,068,758	+		Pf6N2E2_4343	0.20	+1.1
5,068,759	-		Pf6N2E2_4343	0.21	+1.1
5,068,759	-		Pf6N2E2_4343	0.21	-1.2
5,068,821	+		Pf6N2E2_4343	0.29	+1.1
5,068,822	-		Pf6N2E2_4343	0.29	+1.1
5,068,822	-		Pf6N2E2_4343	0.29	+0.1
5,068,822	-		Pf6N2E2_4343	0.29	-1.5
5,068,977	+		Pf6N2E2_4343	0.50	-0.5
5,069,026	-		Pf6N2E2_4343	0.57	-1.2
5,069,172	+		Pf6N2E2_4343	0.77	+1.1
5,069,172	+		Pf6N2E2_4343	0.77	+1.1
5,069,172	+		Pf6N2E2_4343	0.77	-0.5
5,069,172	+		Pf6N2E2_4343	0.77	-1.0
5,069,173	-		Pf6N2E2_4343	0.77	+0.1
5,069,173	-		Pf6N2E2_4343	0.77	-0.9
5,069,173	-		Pf6N2E2_4343	0.77	+2.1
5,069,199	-		Pf6N2E2_4343	0.81	+1.1
5,069,199	-		Pf6N2E2_4343	0.81	-0.5
5,069,414	+				+0.1
5,069,414	+				+1.1
5,069,414	+				+0.1
5,069,588	+				+0.1
5,069,589	-				-0.4
5,069,589	-				+1.1
5,069,589	-				-0.5
5,069,591	+				-0.5
5,069,591	+				-0.3
5,069,591	+				-1.5
5,069,591	+				-1.5
5,069,591	+				+0.1
5,069,591	+				+0.1
5,069,591	+				+0.1
5,069,591	+				-1.3
5,069,591	+				+1.1
5,069,591	+				-0.2
5,069,592	-				-0.9
5,069,592	-				+1.1
5,069,592	-				+0.1
5,069,592	-				+1.1
5,069,592	-				+1.1
5,069,592	-				+1.1
5,069,592	-				+1.1
5,069,592	-				+0.1
5,069,592	-				-0.4
5,069,592	-				-0.2
5,069,592	-				-0.4
5,069,606	+				-0.9
5,069,607	-				-1.5
5,069,607	-				+1.1
5,069,607	-				+0.4
5,069,672	+		Pf6N2E2_4344	0.11	+1.1
5,069,672	+		Pf6N2E2_4344	0.11	+1.1
5,069,672	+		Pf6N2E2_4344	0.11	+1.1
5,069,672	+		Pf6N2E2_4344	0.11	+1.1
5,069,673	-		Pf6N2E2_4344	0.11	-1.4
5,069,673	-		Pf6N2E2_4344	0.11	-0.7
5,069,673	-		Pf6N2E2_4344	0.11	+0.1
5,069,673	-		Pf6N2E2_4344	0.11	-0.5
5,069,673	-		Pf6N2E2_4344	0.11	+1.1
5,069,673	-		Pf6N2E2_4344	0.11	+1.1
5,069,702	+		Pf6N2E2_4344	0.12	-0.8
5,069,827	+		Pf6N2E2_4344	0.16	+0.1
5,069,861	+		Pf6N2E2_4344	0.17	+0.1
5,069,861	+		Pf6N2E2_4344	0.17	+0.1
5,069,861	+		Pf6N2E2_4344	0.17	+0.1
5,069,861	+		Pf6N2E2_4344	0.17	-0.4
5,069,861	+		Pf6N2E2_4344	0.17	-1.0
5,069,861	+		Pf6N2E2_4344	0.17	+0.4
5,069,861	+		Pf6N2E2_4344	0.17	+1.1
5,069,861	+		Pf6N2E2_4344	0.17	+1.1
5,069,862	-		Pf6N2E2_4344	0.17	-0.5
5,069,862	-		Pf6N2E2_4344	0.17	+0.1
5,069,862	-		Pf6N2E2_4344	0.17	+0.1
5,069,862	-		Pf6N2E2_4344	0.17	-2.1
5,069,862	-		Pf6N2E2_4344	0.17	-0.3
5,069,862	-		Pf6N2E2_4344	0.17	+1.1
5,069,862	-		Pf6N2E2_4344	0.17	-1.2
5,069,862	-		Pf6N2E2_4344	0.17	-0.5
5,069,862	-		Pf6N2E2_4344	0.17	+1.1
5,069,915	+		Pf6N2E2_4344	0.19	+1.1
5,069,915	+		Pf6N2E2_4344	0.19	-1.5
5,069,936	+		Pf6N2E2_4344	0.19	-0.5
5,069,964	-		Pf6N2E2_4344	0.20	-2.4
5,069,966	-		Pf6N2E2_4344	0.20	+0.1
5,070,261	-		Pf6N2E2_4344	0.30	-0.5
5,070,261	-		Pf6N2E2_4344	0.30	-0.5