Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4729

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
5,467,071	+				+0.1
5,467,072	-				+1.1
5,467,072	-				-0.5
5,467,094	+				-0.5
5,467,094	+				-0.5
5,467,094	+				+1.1
5,467,095	-				-0.5
5,467,095	-				-0.9
5,467,112	+				-0.5
5,467,112	+				+1.1
5,467,112	+				+1.1
5,467,113	-				+1.1
5,467,113	-				-0.9
5,467,113	-				-1.1
5,467,132	+				-0.6
5,467,150	-				-0.9
5,467,321	+		Pf6N2E2_4728	0.40	+1.1
5,467,321	+		Pf6N2E2_4728	0.40	-0.2
5,467,321	+		Pf6N2E2_4728	0.40	+1.1
5,467,322	-		Pf6N2E2_4728	0.40	-0.5
5,467,346	+		Pf6N2E2_4728	0.47	+0.5
5,467,435	+		Pf6N2E2_4728	0.71	-0.0
5,467,436	-		Pf6N2E2_4728	0.72	-0.9
5,467,436	-		Pf6N2E2_4728	0.72	+1.1
5,467,450	+		Pf6N2E2_4728	0.75	+1.1
5,467,450	+		Pf6N2E2_4728	0.75	+1.1
5,467,450	+		Pf6N2E2_4728	0.75	+1.1
5,467,450	+		Pf6N2E2_4728	0.75	+0.1
5,467,513	+				-0.5
5,467,513	+				+1.1
5,467,514	-				+0.1
5,467,514	-				+1.1
5,467,514	-				+1.1
5,467,514	-				+1.8
5,467,635	+				-1.2
5,467,635	+				-0.5
5,467,635	+				+1.1
5,467,635	+				+1.1
5,467,635	+				+0.1
5,467,635	+				+0.4
5,467,635	+				+0.1
5,467,636	-				-1.3
5,467,636	-				+0.1
5,467,636	-				+1.1
5,467,640	+				-0.8
5,467,686	+				+1.1
5,467,686	+				-0.5
5,467,686	+				+0.1
5,467,686	+				-0.5
5,467,686	+				-0.5
5,467,686	+				+0.1
5,467,686	+				+1.1
5,467,687	-				+0.1
5,467,687	-				+0.1
5,467,687	-				-0.9
5,467,687	-				+0.1
5,467,687	-				+0.1
5,467,687	-				+0.1
5,467,687	-				-1.3
5,467,687	-				-1.5
5,467,687	-				-0.9
5,467,687	-				+1.1
5,467,688	+				+0.1
5,467,688	+				-0.5
5,467,688	+				-0.9
5,467,688	+				+1.1
5,467,689	-				+0.1
5,467,689	-				+0.1
5,467,689	-				-0.9
5,467,700	-				-1.2
5,467,742	+				-0.7
5,467,743	-				+1.1
5,467,743	-				+1.1
5,467,743	-				-1.2
5,467,743	-				-0.4
5,467,768	-				-0.5
5,467,808	+				-1.4
5,467,808	+				+1.1
5,467,809	-				-0.5
5,467,883	-				+0.1
5,467,911	-				+1.1
5,467,956	+				-0.5
5,467,957	-				+0.1
5,468,056	+				-0.6
5,468,057	-				+1.1
5,468,086	+		Pf6N2E2_4729	0.13	+1.1
5,468,086	+		Pf6N2E2_4729	0.13	+0.2
5,468,087	-		Pf6N2E2_4729	0.13	+0.5
5,468,087	-		Pf6N2E2_4729	0.13	+0.1
5,468,155	+		Pf6N2E2_4729	0.25	-0.3
5,468,155	+		Pf6N2E2_4729	0.25	+0.1
5,468,156	-		Pf6N2E2_4729	0.25	-1.1
5,468,200	+		Pf6N2E2_4729	0.33	+1.1
5,468,200	+		Pf6N2E2_4729	0.33	+0.1
5,468,257	+		Pf6N2E2_4729	0.43	-0.5
5,468,258	-		Pf6N2E2_4729	0.43	+0.7
5,468,406	-		Pf6N2E2_4729	0.69	-0.1
5,468,509	+		Pf6N2E2_4729	0.87	+1.1
5,468,510	-		Pf6N2E2_4729	0.87	-0.2
5,468,578	-				+1.1
5,468,585	+				+1.1
5,468,586	-				+1.1
5,468,616	+				+0.1
5,468,616	+				+0.1
5,468,616	+				-0.9
5,468,617	-				+0.1
5,468,617	-				+1.1
5,468,617	-				+0.1
5,468,617	-				+1.1
5,468,710	+				-0.5
5,468,711	-				+0.1
5,468,803	+		Pf6N2E2_4730	0.26	+2.1
5,468,804	-		Pf6N2E2_4730	0.27	+1.1
5,468,811	-		Pf6N2E2_4730	0.28	+1.1
5,468,820	+		Pf6N2E2_4730	0.30	+0.1
5,468,820	+		Pf6N2E2_4730	0.30	+0.1
5,468,820	+		Pf6N2E2_4730	0.30	+0.1
5,468,820	+		Pf6N2E2_4730	0.30	-1.1
5,468,820	+		Pf6N2E2_4730	0.30	-0.9
5,468,821	-		Pf6N2E2_4730	0.31	+2.1
5,468,821	-		Pf6N2E2_4730	0.31	+1.1
5,468,821	-		Pf6N2E2_4730	0.31	+1.1
5,468,821	-		Pf6N2E2_4730	0.31	-0.9
5,468,821	-		Pf6N2E2_4730	0.31	+1.1
5,468,867	+		Pf6N2E2_4730	0.42	+0.5
5,468,867	+		Pf6N2E2_4730	0.42	+1.1
5,468,893	+		Pf6N2E2_4730	0.48	+1.1
5,468,894	-		Pf6N2E2_4730	0.48	+1.1
5,469,015	-		Pf6N2E2_4730	0.77	+1.1
5,469,042	+		Pf6N2E2_4730	0.83	-0.5
5,469,042	+		Pf6N2E2_4730	0.83	-0.5
5,469,043	-		Pf6N2E2_4730	0.83	+0.1
5,469,043	-		Pf6N2E2_4730	0.83	+1.1
5,469,043	-		Pf6N2E2_4730	0.83	-0.5
5,469,102	+				-0.8
5,469,166	+				-0.5
5,469,167	-				-0.3
5,469,167	-				-0.5
5,469,207	+				+0.1
5,469,208	-				+0.1
5,469,210	-				+1.1
5,469,222	+				-1.5
5,469,228	-				+0.1
5,469,229	+				-2.5
5,469,233	+				-0.6
5,469,296	+				+1.1
5,469,321	+				-0.9
5,469,321	+				-0.9
5,469,321	+				-0.6
5,469,322	-				-0.6
5,469,322	-				+1.1
5,469,322	-				+1.1
5,469,328	-				+0.1
5,469,366	+				+1.1
5,469,400	+				+0.1
5,469,400	+				+0.5
5,469,401	-				+1.1
5,469,401	-				+1.1
5,469,401	-				+0.1