Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06630

Experiment: L-tyrosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine (C) 10 mM
1,478,726	+		PFLU_RS06620	0.89	-0.2
1,478,726	+		PFLU_RS06620	0.89	-1.2
1,478,726	+		PFLU_RS06620	0.89	+0.1
1,478,727	-		PFLU_RS06620	0.89	-0.4
1,478,727	-		PFLU_RS06620	0.89	-1.0
1,478,727	-		PFLU_RS06620	0.89	-0.7
1,478,727	-		PFLU_RS06620	0.89	-0.3
1,478,727	-		PFLU_RS06620	0.89	-1.8
1,478,752	+				-0.2
1,478,753	-				-0.3
1,478,753	-				+1.6
1,478,763	+				+0.2
1,478,763	+				+0.9
1,478,763	+				+0.1
1,478,763	+				+0.5
1,478,764	-				+0.2
1,478,764	-				-0.6
1,478,764	-				-0.3
1,478,764	-				-0.6
1,478,764	-				-0.1
1,478,764	-				+0.6
1,478,764	-				+0.6
1,478,806	+				+0.4
1,478,806	+				+0.4
1,478,806	+				-0.4
1,478,806	+				+0.1
1,478,806	+				-0.4
1,478,806	+				+0.4
1,478,807	-				+0.7
1,478,807	-				-0.0
1,478,807	-				-0.1
1,478,807	-				-1.1
1,478,807	-				+0.3
1,478,807	-				-0.1
1,478,807	-				+0.5
1,478,807	-				-1.5
1,478,814	+				-0.0
1,478,814	+				-0.6
1,478,815	-				+0.1
1,478,815	-				+0.2
1,478,815	-				+0.4
1,478,815	-				+1.1
1,478,815	-				-0.7
1,478,838	+				+0.2
1,478,838	+				+0.8
1,478,838	+				+0.5
1,478,839	-				+1.1
1,478,929	-				-0.2
1,478,943	+				-2.5
1,478,943	+				-2.2
1,478,944	-				-2.5
1,478,986	+				-2.2
1,479,021	+		PFLU_RS06625	0.13	-1.1
1,479,021	+		PFLU_RS06625	0.13	-0.8
1,479,021	+		PFLU_RS06625	0.13	-4.3
1,479,021	+		PFLU_RS06625	0.13	-2.4
1,479,021	+		PFLU_RS06625	0.13	-2.0
1,479,021	+		PFLU_RS06625	0.13	+0.4
1,479,021	+		PFLU_RS06625	0.13	-3.5
1,479,022	-		PFLU_RS06625	0.13	+1.2
1,479,022	-		PFLU_RS06625	0.13	-2.1
1,479,022	-		PFLU_RS06625	0.13	+0.2
1,479,022	-		PFLU_RS06625	0.13	-2.8
1,479,022	-		PFLU_RS06625	0.13	-1.2
1,479,022	-		PFLU_RS06625	0.13	-1.4
1,479,022	-		PFLU_RS06625	0.13	-1.6
1,479,022	-		PFLU_RS06625	0.13	-0.5
1,479,323	-		PFLU_RS06625	0.56	-2.6
1,479,453	+		PFLU_RS06625	0.75	-0.7
1,479,453	+		PFLU_RS06625	0.75	-2.7
1,479,453	+		PFLU_RS06625	0.75	-2.2
1,479,453	+		PFLU_RS06625	0.75	-2.2
1,479,453	+		PFLU_RS06625	0.75	-3.6
1,479,453	+		PFLU_RS06625	0.75	-2.7
1,479,454	-		PFLU_RS06625	0.75	-1.0
1,479,566	+				-0.8
1,479,566	+				-1.6
1,479,566	+				-1.0
1,479,566	+				-1.6
1,479,566	+				-1.6
1,479,566	+				-1.8
1,479,566	+				-1.4
1,479,566	+				-1.9
1,479,566	+				-0.8
1,479,566	+				+0.6
1,479,566	+				-1.4
1,479,567	-				-2.8
1,479,567	-				-2.3
1,479,567	-				-1.1
1,479,567	-				-2.0
1,479,567	-				-2.8
1,479,567	-				+0.2
1,479,567	-				-0.4
1,479,567	-				-2.0
1,479,567	-				-1.4
1,479,567	-				+1.0
1,479,567	-				-1.2
1,479,567	-				-2.5
1,479,567	-				-2.2
1,479,567	-				-0.7
1,479,601	-				-1.6
1,479,634	+				-1.5
1,479,634	+				-0.7
1,479,634	+				-0.4
1,479,635	-				-1.7
1,479,635	-				-2.3
1,479,635	-				-2.0
1,479,649	+				-2.1
1,479,649	+				-0.4
1,479,649	+				-3.1
1,479,649	+				-1.0
1,479,649	+				-1.5
1,479,650	-				-1.4
1,479,650	-				-1.4
1,479,935	-		PFLU_RS06630	0.39	-1.6
1,479,935	-		PFLU_RS06630	0.39	-2.8
1,479,995	-		PFLU_RS06630	0.47	-1.3
1,480,003	+		PFLU_RS06630	0.48	-0.6
1,480,003	+		PFLU_RS06630	0.48	-1.1
1,480,003	+		PFLU_RS06630	0.48	-1.1
1,480,238	-		PFLU_RS06630	0.79	-0.6
1,480,238	-		PFLU_RS06630	0.79	-3.0
1,480,497	+				-1.9
1,480,587	-		PFLU_RS06635	0.15	-1.1
1,480,618	+		PFLU_RS06635	0.18	-2.0
1,480,703	-		PFLU_RS06635	0.24	-1.3
1,480,857	+		PFLU_RS06635	0.37	-1.2
1,480,857	+		PFLU_RS06635	0.37	-0.4
1,480,857	+		PFLU_RS06635	0.37	-0.5
1,480,857	+		PFLU_RS06635	0.37	-4.0
1,480,858	-		PFLU_RS06635	0.37	-2.6
1,480,858	-		PFLU_RS06635	0.37	-2.5
1,480,858	-		PFLU_RS06635	0.37	+0.0
1,480,865	+		PFLU_RS06635	0.37	+0.6
1,480,865	+		PFLU_RS06635	0.37	-1.6
1,480,865	+		PFLU_RS06635	0.37	-1.9
1,480,865	+		PFLU_RS06635	0.37	+0.2
1,480,865	+		PFLU_RS06635	0.37	-2.6
1,480,865	+		PFLU_RS06635	0.37	-1.5
1,480,866	-		PFLU_RS06635	0.37	-2.3
1,480,866	-		PFLU_RS06635	0.37	-1.3
1,480,866	-		PFLU_RS06635	0.37	-0.4
1,480,887	+		PFLU_RS06635	0.39	-0.1
1,480,887	+		PFLU_RS06635	0.39	-3.8
1,480,887	+		PFLU_RS06635	0.39	-2.2
1,480,888	-		PFLU_RS06635	0.39	-1.3
1,480,888	-		PFLU_RS06635	0.39	-1.3
1,480,888	-		PFLU_RS06635	0.39	-2.1
1,480,888	-		PFLU_RS06635	0.39	-1.2
1,480,888	-		PFLU_RS06635	0.39	-1.7
1,480,902	+		PFLU_RS06635	0.40	-1.5
1,480,903	-		PFLU_RS06635	0.40	-2.2
1,480,903	-		PFLU_RS06635	0.40	-0.4
1,480,903	-		PFLU_RS06635	0.40	-0.4
1,480,937	-		PFLU_RS06635	0.43	-4.1
1,481,070	+		PFLU_RS06635	0.54	-1.8
1,481,070	+		PFLU_RS06635	0.54	-2.7
1,481,070	+		PFLU_RS06635	0.54	-2.5
1,481,070	+		PFLU_RS06635	0.54	+1.8
1,481,070	+		PFLU_RS06635	0.54	-0.8
1,481,071	-		PFLU_RS06635	0.54	-1.8
1,481,071	-		PFLU_RS06635	0.54	-0.4
1,481,071	-		PFLU_RS06635	0.54	-1.4
1,481,090	+		PFLU_RS06635	0.55	-0.8
1,481,172	+		PFLU_RS06635	0.62	-3.1
1,481,172	+		PFLU_RS06635	0.62	+1.2
1,481,172	+		PFLU_RS06635	0.62	-2.5
1,481,172	+		PFLU_RS06635	0.62	-2.4
1,481,172	+		PFLU_RS06635	0.62	-1.5
1,481,172	+		PFLU_RS06635	0.62	-1.9
1,481,173	-		PFLU_RS06635	0.62	-1.4
1,481,173	-		PFLU_RS06635	0.62	-1.4
1,481,173	-		PFLU_RS06635	0.62	-1.3
1,481,173	-		PFLU_RS06635	0.62	-1.5
1,481,173	-		PFLU_RS06635	0.62	-0.8
1,481,173	-		PFLU_RS06635	0.62	-0.6
1,481,190	+		PFLU_RS06635	0.63	-2.8
1,481,190	+		PFLU_RS06635	0.63	-3.3
1,481,190	+		PFLU_RS06635	0.63	-1.1
1,481,190	+		PFLU_RS06635	0.63	-1.1
1,481,190	+		PFLU_RS06635	0.63	+0.5
1,481,190	+		PFLU_RS06635	0.63	-1.5
1,481,190	+		PFLU_RS06635	0.63	+0.6
1,481,190	+		PFLU_RS06635	0.63	-2.3
1,481,190	+		PFLU_RS06635	0.63	-1.1
1,481,190	+		PFLU_RS06635	0.63	+0.2
1,481,190	+		PFLU_RS06635	0.63	-2.7
1,481,190	+		PFLU_RS06635	0.63	-1.4
1,481,190	+		PFLU_RS06635	0.63	+0.5
1,481,190	+		PFLU_RS06635	0.63	-1.3
1,481,190	+		PFLU_RS06635	0.63	-0.4
1,481,191	-		PFLU_RS06635	0.63	-2.3
1,481,191	-		PFLU_RS06635	0.63	-1.6
1,481,191	-		PFLU_RS06635	0.63	-2.9
1,481,191	-		PFLU_RS06635	0.63	-3.7
1,481,191	-		PFLU_RS06635	0.63	-1.3
1,481,191	-		PFLU_RS06635	0.63	-0.1
1,481,191	-		PFLU_RS06635	0.63	-2.1
1,481,191	-		PFLU_RS06635	0.63	-0.4
1,481,191	-		PFLU_RS06635	0.63	+1.8
1,481,191	-		PFLU_RS06635	0.63	-2.5
1,481,191	-		PFLU_RS06635	0.63	-3.4
1,481,191	-		PFLU_RS06635	0.63	-2.3
1,481,191	-		PFLU_RS06635	0.63	-1.4
1,481,196	+		PFLU_RS06635	0.64	-0.8
1,481,196	+		PFLU_RS06635	0.64	-1.4
1,481,196	+		PFLU_RS06635	0.64	-1.6
1,481,196	+		PFLU_RS06635	0.64	-2.3
1,481,196	+		PFLU_RS06635	0.64	+0.9
1,481,196	+		PFLU_RS06635	0.64	-0.8
1,481,196	+		PFLU_RS06635	0.64	-3.5
1,481,196	+		PFLU_RS06635	0.64	-2.0
1,481,196	+		PFLU_RS06635	0.64	-1.6
1,481,196	+		PFLU_RS06635	0.64	-2.7
1,481,196	+		PFLU_RS06635	0.64	-1.4
1,481,196	+		PFLU_RS06635	0.64	-2.4
1,481,197	-		PFLU_RS06635	0.64	-2.6
1,481,197	-		PFLU_RS06635	0.64	-0.8
1,481,197	-		PFLU_RS06635	0.64	-2.1
1,481,197	-		PFLU_RS06635	0.64	-1.8
1,481,197	-		PFLU_RS06635	0.64	-2.7
1,481,197	-		PFLU_RS06635	0.64	-2.6
1,481,211	+		PFLU_RS06635	0.65	-1.0
1,481,211	+		PFLU_RS06635	0.65	-1.9
1,481,212	-		PFLU_RS06635	0.65	-1.7
1,481,223	+		PFLU_RS06635	0.66	-0.1
1,481,223	+		PFLU_RS06635	0.66	-3.7
1,481,224	-		PFLU_RS06635	0.66	-1.6
1,481,224	-		PFLU_RS06635	0.66	-2.4
1,481,224	-		PFLU_RS06635	0.66	-0.2
1,481,224	-		PFLU_RS06635	0.66	-1.6
1,481,282	+		PFLU_RS06635	0.71	-2.5
1,481,282	+		PFLU_RS06635	0.71	-1.6
1,481,282	+		PFLU_RS06635	0.71	+0.5
1,481,282	+		PFLU_RS06635	0.71	-2.0
1,481,282	+		PFLU_RS06635	0.71	-1.8
1,481,282	+		PFLU_RS06635	0.71	-1.9
1,481,282	+		PFLU_RS06635	0.71	+2.8
1,481,282	+		PFLU_RS06635	0.71	+0.2
1,481,282	+		PFLU_RS06635	0.71	-2.3
1,481,282	+		PFLU_RS06635	0.71	-1.0
1,481,282	+		PFLU_RS06635	0.71	-0.1
1,481,282	+		PFLU_RS06635	0.71	-1.6
1,481,286	+		PFLU_RS06635	0.71	-1.4
1,481,286	+		PFLU_RS06635	0.71	-1.4
1,481,286	+		PFLU_RS06635	0.71	-1.6
1,481,286	+		PFLU_RS06635	0.71	+1.2
1,481,286	+		PFLU_RS06635	0.71	-1.5
1,481,286	+		PFLU_RS06635	0.71	+1.2
1,481,286	+		PFLU_RS06635	0.71	-2.0
1,481,286	+		PFLU_RS06635	0.71	-2.4
1,481,286	+		PFLU_RS06635	0.71	-1.7
1,481,286	+		PFLU_RS06635	0.71	-2.8
1,481,308	+		PFLU_RS06635	0.73	-2.3
1,481,376	+		PFLU_RS06635	0.78	-0.7
1,481,376	+		PFLU_RS06635	0.78	-1.8
1,481,376	+		PFLU_RS06635	0.78	-2.0
1,481,376	+		PFLU_RS06635	0.78	-2.6
1,481,376	+		PFLU_RS06635	0.78	-3.4
1,481,376	+		PFLU_RS06635	0.78	+1.2
1,481,376	+		PFLU_RS06635	0.78	-3.0
1,481,376	+		PFLU_RS06635	0.78	-1.6
1,481,376	+		PFLU_RS06635	0.78	-0.4
1,481,376	+		PFLU_RS06635	0.78	+1.2
1,481,376	+		PFLU_RS06635	0.78	-0.8
1,481,376	+		PFLU_RS06635	0.78	-2.8
1,481,376	+		PFLU_RS06635	0.78	-2.0
1,481,376	+		PFLU_RS06635	0.78	-1.8
1,481,377	-		PFLU_RS06635	0.78	-1.3
1,481,377	-		PFLU_RS06635	0.78	-2.9
1,481,377	-		PFLU_RS06635	0.78	-0.7
1,481,377	-		PFLU_RS06635	0.78	-1.3
1,481,377	-		PFLU_RS06635	0.78	+0.2
1,481,377	-		PFLU_RS06635	0.78	+0.2
1,481,377	-		PFLU_RS06635	0.78	-1.6
1,481,377	-		PFLU_RS06635	0.78	-1.3
1,481,377	-		PFLU_RS06635	0.78	-3.8