Strain Fitness in Pseudomonas simiae WCS417 around PS417_25060

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,433,225	+				-0.4
5,433,225	+				-1.2
5,433,290	+				-3.5
5,433,290	+				-0.0
5,433,291	-				+0.4
5,433,291	-				-0.7
5,433,293	-				+1.3
5,433,293	-				+0.7
5,433,390	-				+4.9
5,433,390	-				-1.6
5,433,390	-				+1.6
5,433,509	+				+0.6
5,433,509	+				+0.8
5,433,509	+				+0.3
5,433,509	+				+1.3
5,433,510	-				+0.1
5,433,510	-				+0.1
5,433,510	-				-0.4
5,433,510	-				+1.0
5,433,514	-				-1.9
5,433,575	+				+0.1
5,433,595	+				+1.0
5,433,615	-				-0.3
5,433,632	+				+1.9
5,433,648	+				+1.1
5,433,746	-				+3.7
5,433,768	+				+3.8
5,433,790	+				-2.0
5,433,790	+				-0.7
5,433,791	-				+0.5
5,433,791	-				+0.3
5,433,815	+				+0.4
5,433,816	-				-2.4
5,433,887	-				-0.0
5,433,932	+				+1.4
5,433,987	+				+0.4
5,433,987	+				-0.8
5,433,987	+				-2.5
5,433,988	-				+0.3
5,433,988	-				-0.3
5,433,988	-				-0.0
5,434,129	+				+0.4
5,434,129	+				+0.0
5,434,129	+				-1.7
5,434,130	-				+0.5
5,434,130	-				-0.0
5,434,135	+				-0.5
5,434,135	+				-0.5
5,434,135	+				+0.3
5,434,136	-				+0.3
5,434,136	-				+0.1
5,434,136	-				+1.5
5,434,136	-				+1.3
5,434,141	+				+1.0
5,434,141	+				-1.2
5,434,147	+				+0.3
5,434,208	-				-0.8
5,434,289	+		PS417_25060	0.16	-0.4
5,434,289	+		PS417_25060	0.16	-0.3
5,434,290	-		PS417_25060	0.16	+0.5
5,434,290	-		PS417_25060	0.16	-0.3
5,434,398	+		PS417_25060	0.23	-0.7
5,434,490	-		PS417_25060	0.30	-1.0
5,434,501	-		PS417_25060	0.31	-0.4
5,434,501	-		PS417_25060	0.31	+3.4
5,434,501	-		PS417_25060	0.31	-3.2
5,434,560	+		PS417_25060	0.35	-0.1
5,434,584	+		PS417_25060	0.37	-4.0
5,434,584	+		PS417_25060	0.37	-1.4
5,434,584	+		PS417_25060	0.37	-0.1
5,434,584	+		PS417_25060	0.37	+0.8
5,434,584	+		PS417_25060	0.37	-0.4
5,434,584	+		PS417_25060	0.37	-0.2
5,434,585	-		PS417_25060	0.37	-0.3
5,434,585	-		PS417_25060	0.37	-0.5
5,434,743	-		PS417_25060	0.48	-1.1
5,434,760	-		PS417_25060	0.50	-0.2
5,434,833	+		PS417_25060	0.55	+0.3
5,434,833	+		PS417_25060	0.55	+1.1
5,434,834	-		PS417_25060	0.55	-1.2
5,434,834	-		PS417_25060	0.55	-1.2
5,434,834	-		PS417_25060	0.55	+0.3
5,434,834	-		PS417_25060	0.55	-0.2
5,434,834	-		PS417_25060	0.55	-3.1
5,434,834	-		PS417_25060	0.55	+0.0
5,434,834	-		PS417_25060	0.55	+0.0
5,434,868	-		PS417_25060	0.57	+0.4
5,434,868	-		PS417_25060	0.57	-1.7
5,434,868	-		PS417_25060	0.57	-0.4
5,434,912	-		PS417_25060	0.61	-2.0
5,435,005	+		PS417_25060	0.67	-0.2
5,435,006	-		PS417_25060	0.67	+0.3
5,435,025	+		PS417_25060	0.69	-0.4
5,435,089	+		PS417_25060	0.73	-0.5
5,435,090	-		PS417_25060	0.73	+1.4
5,435,111	+		PS417_25060	0.75	+0.3
5,435,149	-		PS417_25060	0.78	+0.8
5,435,149	-		PS417_25060	0.78	-0.9
5,435,149	-		PS417_25060	0.78	-0.4
5,435,159	-		PS417_25060	0.78	-2.6
5,435,209	+		PS417_25060	0.82	-1.2
5,435,209	+		PS417_25060	0.82	-0.6
5,435,503	+				+0.1
5,435,503	+				-0.2
5,435,503	+				+1.1
5,435,503	+				+0.7
5,435,503	+				+1.2
5,435,504	-				+0.0
5,435,504	-				+0.3
5,435,504	-				+1.8
5,435,504	-				+0.3
5,435,504	-				+1.0
5,435,504	-				-0.5
5,435,504	-				+0.6
5,435,552	+		PS417_25065	0.10	-2.0
5,435,552	+		PS417_25065	0.10	-1.7
5,435,553	-		PS417_25065	0.10	-1.3
5,435,553	-		PS417_25065	0.10	+1.0
5,435,591	-		PS417_25065	0.14	+0.8
5,435,599	+		PS417_25065	0.14	+0.3
5,435,599	+		PS417_25065	0.14	+0.9
5,435,683	-		PS417_25065	0.22	-0.8
5,435,683	-		PS417_25065	0.22	-0.4
5,435,683	-		PS417_25065	0.22	+1.4
5,435,683	-		PS417_25065	0.22	-0.2
5,435,702	+		PS417_25065	0.23	+1.2
5,435,703	-		PS417_25065	0.23	-1.7
5,435,703	-		PS417_25065	0.23	+1.3
5,435,755	+		PS417_25065	0.28	+0.7
5,435,756	-		PS417_25065	0.28	-1.7
5,435,756	-		PS417_25065	0.28	-1.6
5,435,756	-		PS417_25065	0.28	-0.2
5,435,805	-		PS417_25065	0.32	-3.0
5,435,805	-		PS417_25065	0.32	+0.3
5,435,836	+		PS417_25065	0.35	-3.6
5,435,918	+		PS417_25065	0.42	+0.2
5,435,919	-		PS417_25065	0.42	+1.4
5,435,919	-		PS417_25065	0.42	-0.2
5,436,021	+		PS417_25065	0.51	+0.9
5,436,022	-		PS417_25065	0.51	+0.2
5,436,034	+		PS417_25065	0.52	-1.9
5,436,034	+		PS417_25065	0.52	-2.1
5,436,098	+		PS417_25065	0.58	-0.7
5,436,130	-		PS417_25065	0.60	+0.4
5,436,176	+		PS417_25065	0.64	+0.8
5,436,298	+		PS417_25065	0.75	+0.8
5,436,298	+		PS417_25065	0.75	+0.4
5,436,299	-		PS417_25065	0.75	+0.3
5,436,299	-		PS417_25065	0.75	-1.2
5,436,372	+		PS417_25065	0.81	-0.3
5,436,373	-		PS417_25065	0.82	-2.5
5,436,373	-		PS417_25065	0.82	-2.5
5,436,374	+		PS417_25065	0.82	+1.4
5,436,375	-		PS417_25065	0.82	+0.5