Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20995

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
4,389,326	+		BWI76_RS20990	0.55	+0.1
4,389,339	-		BWI76_RS20990	0.56	-0.2
4,389,339	-		BWI76_RS20990	0.56	-0.3
4,389,526	-		BWI76_RS20990	0.67	+0.7
4,389,743	-		BWI76_RS20990	0.80	-0.4
4,389,843	-		BWI76_RS20990	0.86	-0.1
4,389,843	-		BWI76_RS20990	0.86	-0.6
4,389,860	+		BWI76_RS20990	0.87	-0.7
4,389,868	-		BWI76_RS20990	0.88	-0.0
4,389,923	+				+0.7
4,389,931	+				+0.2
4,389,974	+				+1.3
4,389,997	+				+0.6
4,390,000	-				-0.7
4,390,049	+				+2.2
4,390,231	-				+0.4
4,390,241	-				-2.3
4,390,246	-				-4.1
4,390,246	-				-3.2
4,390,446	+				-2.2
4,390,446	+				-2.7
4,390,476	-		BWI76_RS20995	0.11	-3.0
4,390,617	-		BWI76_RS20995	0.18	-5.4
4,391,043	-		BWI76_RS20995	0.38	-4.3
4,391,302	+		BWI76_RS20995	0.51	-4.5
4,391,642	+		BWI76_RS20995	0.67	-2.2
4,392,555	-		BWI76_RS21000	0.16	-1.6
4,392,635	+		BWI76_RS21000	0.21	-2.0
4,393,187	-		BWI76_RS21000	0.57	-2.1
4,393,289	+		BWI76_RS21000	0.63	+0.9
4,393,289	+		BWI76_RS21000	0.63	-0.8