Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17580

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,652,543	+				+3.4
3,652,546	-				-2.8
3,652,606	-				-1.0
3,652,606	-				-0.3
3,652,609	+				-0.3
3,652,615	-				-1.1
3,652,681	+				-2.6
3,652,719	+				-0.8
3,652,719	+				-0.2
3,652,719	+				+0.5
3,652,719	+				+1.1
3,652,719	+				-0.8
3,652,719	+				-0.8
3,652,727	-				-0.0
3,652,727	-				-0.6
3,652,727	-				+0.6
3,652,727	-				-2.1
3,652,727	-				-1.2
3,652,798	-				-0.2
3,652,801	-				+1.5
3,652,871	+				+0.3
3,652,872	-				-3.4
3,652,879	-				+1.4
3,652,879	-				-0.2
3,652,937	-				-1.3
3,653,004	-		BWI76_RS17580	0.11	+0.7
3,653,016	+		BWI76_RS17580	0.12	-0.5
3,653,024	-		BWI76_RS17580	0.12	+0.4
3,653,029	+		BWI76_RS17580	0.12	-2.3
3,653,029	+		BWI76_RS17580	0.12	+1.4
3,653,034	+		BWI76_RS17580	0.13	-0.5
3,653,039	+		BWI76_RS17580	0.13	+1.6
3,653,039	-		BWI76_RS17580	0.13	-2.1
3,653,044	+		BWI76_RS17580	0.14	+0.2
3,653,052	-		BWI76_RS17580	0.14	-1.9
3,653,052	-		BWI76_RS17580	0.14	-0.4
3,653,052	-		BWI76_RS17580	0.14	+1.2
3,653,057	-		BWI76_RS17580	0.14	-2.6
3,653,142	-		BWI76_RS17580	0.20	-3.9
3,653,149	-		BWI76_RS17580	0.21	-1.5
3,653,172	+		BWI76_RS17580	0.22	-1.8
3,653,201	-		BWI76_RS17580	0.24	-1.1
3,653,210	-		BWI76_RS17580	0.25	-1.9
3,653,212	+		BWI76_RS17580	0.25	-1.1
3,653,220	-		BWI76_RS17580	0.26	+0.6
3,653,220	-		BWI76_RS17580	0.26	-1.7
3,653,269	+		BWI76_RS17580	0.29	-2.3
3,653,272	-		BWI76_RS17580	0.29	-1.1
3,653,279	+		BWI76_RS17580	0.30	-1.0
3,653,388	-		BWI76_RS17580	0.37	+0.2
3,653,424	-		BWI76_RS17580	0.40	-2.1
3,653,453	+		BWI76_RS17580	0.42	-1.2
3,653,497	+		BWI76_RS17580	0.45	-1.0
3,653,553	+		BWI76_RS17580	0.49	+0.0
3,653,702	+		BWI76_RS17580	0.59	+0.2
3,653,913	+		BWI76_RS17580	0.74	-1.0
3,653,957	+		BWI76_RS17580	0.77	-0.1
3,654,041	-		BWI76_RS17580	0.83	-0.1
3,654,041	-		BWI76_RS17580	0.83	-0.3
3,654,119	-		BWI76_RS17580	0.88	-0.8
3,654,158	-				+0.3
3,654,224	-				+0.5
3,654,229	-				-0.3
3,654,295	+				+1.9
3,654,361	-		BWI76_RS17585	0.17	-0.2
3,654,372	-		BWI76_RS17585	0.20	-0.3
3,654,376	+		BWI76_RS17585	0.21	-1.1
3,654,376	+		BWI76_RS17585	0.21	+0.8
3,654,377	-		BWI76_RS17585	0.21	-2.1
3,654,451	-		BWI76_RS17585	0.38	-0.6
3,654,457	+		BWI76_RS17585	0.40	+0.0
3,654,465	-		BWI76_RS17585	0.41	-0.1
3,654,476	+		BWI76_RS17585	0.44	-1.6
3,654,476	+		BWI76_RS17585	0.44	+0.4
3,654,614	+		BWI76_RS17585	0.76	-1.5
3,654,648	+		BWI76_RS17585	0.83	-0.1
3,654,655	+		BWI76_RS17585	0.85	-0.9
3,654,656	-		BWI76_RS17585	0.85	-0.1
3,654,684	-				-0.4
3,654,740	-				-0.9
3,654,803	-				-1.4
3,654,816	-				-0.2
3,654,821	+				-0.5
3,654,875	+		BWI76_RS17590	0.21	-0.3
3,654,883	-		BWI76_RS17590	0.23	-3.8
3,654,915	+		BWI76_RS17590	0.31	-0.1
3,654,976	+		BWI76_RS17590	0.45	+0.1
3,654,984	-		BWI76_RS17590	0.47	+0.9
3,655,018	+		BWI76_RS17590	0.56	-1.3
3,655,018	-		BWI76_RS17590	0.56	-0.2
3,655,023	+		BWI76_RS17590	0.57	+0.0
3,655,026	-		BWI76_RS17590	0.58	+0.2
3,655,062	+		BWI76_RS17590	0.66	-0.5
3,655,076	-		BWI76_RS17590	0.70	+0.1
3,655,086	-		BWI76_RS17590	0.72	-1.2
3,655,086	-		BWI76_RS17590	0.72	+0.7
3,655,086	-		BWI76_RS17590	0.72	-1.4
3,655,086	-		BWI76_RS17590	0.72	+0.2
3,655,100	+		BWI76_RS17590	0.76	-0.1
3,655,100	+		BWI76_RS17590	0.76	-0.0
3,655,100	+		BWI76_RS17590	0.76	-0.1
3,655,100	+		BWI76_RS17590	0.76	-0.3
3,655,108	-		BWI76_RS17590	0.78	-2.0
3,655,108	-		BWI76_RS17590	0.78	-0.2
3,655,131	-		BWI76_RS17590	0.83	-2.1
3,655,131	-		BWI76_RS17590	0.83	-0.6
3,655,151	+		BWI76_RS17590	0.88	+1.0
3,655,233	-				+0.7
3,655,239	+				+1.0
3,655,239	+				+0.6
3,655,285	+				+0.2