Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22505

Experiment: acetate 30 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 30 mM (C)
5,062,058	-		PFLU_RS22500	0.37	-0.4
5,062,148	+		PFLU_RS22500	0.44	-0.4
5,062,148	+		PFLU_RS22500	0.44	-2.2
5,062,148	+		PFLU_RS22500	0.44	-0.4
5,062,149	-		PFLU_RS22500	0.44	+0.0
5,062,241	+		PFLU_RS22500	0.50	-2.2
5,062,241	+		PFLU_RS22500	0.50	-1.8
5,062,241	+		PFLU_RS22500	0.50	-2.0
5,062,241	+		PFLU_RS22500	0.50	-1.6
5,062,241	+		PFLU_RS22500	0.50	-0.2
5,062,241	+		PFLU_RS22500	0.50	-2.3
5,062,242	-		PFLU_RS22500	0.50	-1.9
5,062,242	-		PFLU_RS22500	0.50	-1.2
5,062,242	-		PFLU_RS22500	0.50	-1.2
5,062,242	-		PFLU_RS22500	0.50	-3.5
5,062,242	-		PFLU_RS22500	0.50	-0.4
5,062,242	-		PFLU_RS22500	0.50	-1.2
5,062,242	-		PFLU_RS22500	0.50	-1.6
5,062,242	-		PFLU_RS22500	0.50	+0.3
5,062,242	-		PFLU_RS22500	0.50	+0.2
5,062,242	-		PFLU_RS22500	0.50	-0.9
5,062,242	-		PFLU_RS22500	0.50	-0.4
5,062,242	-		PFLU_RS22500	0.50	-1.9
5,062,242	-		PFLU_RS22500	0.50	-0.4
5,062,242	-		PFLU_RS22500	0.50	+3.1
5,062,328	+		PFLU_RS22500	0.56	-0.7
5,062,328	+		PFLU_RS22500	0.56	+1.6
5,062,328	+		PFLU_RS22500	0.56	-1.2
5,062,328	+		PFLU_RS22500	0.56	+0.6
5,062,328	+		PFLU_RS22500	0.56	+0.0
5,062,329	-		PFLU_RS22500	0.56	-0.6
5,062,329	-		PFLU_RS22500	0.56	-0.8
5,062,329	-		PFLU_RS22500	0.56	+0.3
5,062,329	-		PFLU_RS22500	0.56	-1.6
5,062,532	+		PFLU_RS22500	0.70	+3.8
5,062,532	+		PFLU_RS22500	0.70	-0.9
5,062,532	+		PFLU_RS22500	0.70	-0.1
5,062,533	-		PFLU_RS22500	0.70	-1.6
5,062,533	-		PFLU_RS22500	0.70	-1.9
5,062,533	-		PFLU_RS22500	0.70	-0.4
5,062,544	+		PFLU_RS22500	0.71	+0.3
5,062,622	+		PFLU_RS22500	0.76	-0.7
5,062,622	+		PFLU_RS22500	0.76	+2.6
5,062,622	+		PFLU_RS22500	0.76	-0.4
5,062,622	+		PFLU_RS22500	0.76	-1.7
5,062,622	+		PFLU_RS22500	0.76	-0.1
5,062,622	+		PFLU_RS22500	0.76	-1.2
5,062,622	+		PFLU_RS22500	0.76	-1.4
5,062,622	+		PFLU_RS22500	0.76	-0.1
5,062,622	+		PFLU_RS22500	0.76	-2.1
5,062,622	+		PFLU_RS22500	0.76	-1.5
5,062,623	-		PFLU_RS22500	0.76	+1.4
5,062,623	-		PFLU_RS22500	0.76	-3.2
5,062,623	-		PFLU_RS22500	0.76	+0.1
5,062,623	-		PFLU_RS22500	0.76	-0.3
5,062,623	-		PFLU_RS22500	0.76	-1.7
5,062,623	-		PFLU_RS22500	0.76	-2.1
5,062,623	-		PFLU_RS22500	0.76	-2.2
5,062,623	-		PFLU_RS22500	0.76	-1.2
5,062,623	-		PFLU_RS22500	0.76	-2.3
5,062,623	-		PFLU_RS22500	0.76	+0.2
5,062,623	-		PFLU_RS22500	0.76	+0.1
5,062,623	-		PFLU_RS22500	0.76	-1.0
5,062,623	-		PFLU_RS22500	0.76	-0.9
5,062,651	+		PFLU_RS22500	0.78	-1.2
5,062,651	+		PFLU_RS22500	0.78	+0.0
5,062,651	+		PFLU_RS22500	0.78	-0.4
5,062,651	+		PFLU_RS22500	0.78	-1.4
5,062,651	+		PFLU_RS22500	0.78	-1.6
5,062,652	-		PFLU_RS22500	0.78	+0.0
5,062,652	-		PFLU_RS22500	0.78	-1.7
5,062,652	-		PFLU_RS22500	0.78	-0.3
5,062,652	-		PFLU_RS22500	0.78	+0.4
5,062,652	-		PFLU_RS22500	0.78	-1.9
5,062,652	-		PFLU_RS22500	0.78	-0.7
5,062,652	-		PFLU_RS22500	0.78	-1.1
5,062,809	+		PFLU_RS22500	0.89	-0.9
5,062,809	+		PFLU_RS22500	0.89	-2.4
5,062,809	+		PFLU_RS22500	0.89	-1.2
5,062,810	-		PFLU_RS22500	0.89	-0.4
5,062,810	-		PFLU_RS22500	0.89	+1.2
5,062,907	+				+0.0
5,062,907	+				+0.6
5,062,907	+				-1.7
5,062,907	+				-1.4
5,062,908	-				+0.1
5,062,908	-				-2.5
5,062,955	+				+0.0
5,062,955	+				+1.3
5,062,955	+				-0.5
5,062,956	-				+0.0
5,062,956	-				-3.0
5,062,956	-				-1.9
5,062,961	+				-1.0
5,062,961	+				-1.4
5,062,962	-				+0.7
5,062,979	+				-1.2
5,062,980	-				-0.4
5,063,021	+				-1.2
5,063,021	+				-1.4
5,063,021	+				-1.7
5,063,021	+				+0.6
5,063,021	+				-1.9
5,063,021	+				-0.6
5,063,021	+				-0.7
5,063,021	+				+0.0
5,063,022	-				-1.9
5,063,022	-				+2.1
5,063,022	-				-0.2
5,063,022	-				-0.1
5,063,022	-				-1.2
5,063,022	-				-0.7
5,063,088	+				-0.9
5,063,088	+				+1.6
5,063,088	+				+3.0
5,063,088	+				-0.1
5,063,089	-				-2.7
5,063,089	-				-1.0
5,063,089	-				+1.6
5,063,089	-				-1.0
5,063,089	-				+0.6
5,063,089	-				+0.6
5,063,089	-				-1.4
5,063,089	-				-2.5
5,063,130	+				+0.0
5,063,130	+				+0.0
5,063,130	+				+0.4
5,063,130	+				-1.2
5,063,131	-				+1.4
5,063,131	-				-3.0
5,063,131	-				-1.1
5,063,131	-				-0.5
5,063,131	-				-2.2
5,063,131	-				-2.2
5,063,190	+				-1.2
5,063,191	-				-2.7
5,063,191	-				-2.5
5,063,382	+		PFLU_RS22505	0.18	-1.7
5,063,544	+		PFLU_RS22505	0.24	-0.8
5,063,544	+		PFLU_RS22505	0.24	+0.5
5,063,544	+		PFLU_RS22505	0.24	-1.0
5,063,544	+		PFLU_RS22505	0.24	-2.8
5,063,544	+		PFLU_RS22505	0.24	-1.1
5,063,544	+		PFLU_RS22505	0.24	-0.9
5,063,544	+		PFLU_RS22505	0.24	+2.3
5,063,545	-		PFLU_RS22505	0.25	+0.7
5,063,545	-		PFLU_RS22505	0.25	+0.5
5,063,545	-		PFLU_RS22505	0.25	-1.6
5,063,545	-		PFLU_RS22505	0.25	-2.2
5,063,545	-		PFLU_RS22505	0.25	+0.8
5,063,545	-		PFLU_RS22505	0.25	-0.9
5,063,545	-		PFLU_RS22505	0.25	-1.4
5,063,545	-		PFLU_RS22505	0.25	-0.2
5,063,602	-		PFLU_RS22505	0.27	-1.9
5,063,841	+		PFLU_RS22505	0.37	+1.5
5,063,841	+		PFLU_RS22505	0.37	+0.6
5,063,841	+		PFLU_RS22505	0.37	-0.7
5,063,841	+		PFLU_RS22505	0.37	+1.0
5,063,841	+		PFLU_RS22505	0.37	+0.6
5,063,841	+		PFLU_RS22505	0.37	-0.1
5,063,841	+		PFLU_RS22505	0.37	-0.9
5,063,841	+		PFLU_RS22505	0.37	-1.0
5,063,842	-		PFLU_RS22505	0.37	+0.0
5,063,842	-		PFLU_RS22505	0.37	-2.9
5,063,842	-		PFLU_RS22505	0.37	+0.5
5,063,842	-		PFLU_RS22505	0.37	-0.6
5,063,842	-		PFLU_RS22505	0.37	+2.0
5,063,842	-		PFLU_RS22505	0.37	-1.1
5,063,842	-		PFLU_RS22505	0.37	-1.2
5,063,842	-		PFLU_RS22505	0.37	+1.0
5,063,850	+		PFLU_RS22505	0.37	-2.8
5,063,851	-		PFLU_RS22505	0.37	+1.6
5,063,851	-		PFLU_RS22505	0.37	-1.2
5,063,979	+		PFLU_RS22505	0.43	+0.4
5,063,979	+		PFLU_RS22505	0.43	-0.4
5,063,979	+		PFLU_RS22505	0.43	+0.9
5,063,979	+		PFLU_RS22505	0.43	-0.8
5,063,979	+		PFLU_RS22505	0.43	-0.3
5,063,980	-		PFLU_RS22505	0.43	-2.1
5,063,980	-		PFLU_RS22505	0.43	-2.5
5,063,980	-		PFLU_RS22505	0.43	+1.3
5,063,980	-		PFLU_RS22505	0.43	-0.6
5,063,980	-		PFLU_RS22505	0.43	-2.2
5,063,980	-		PFLU_RS22505	0.43	-0.3
5,063,982	+		PFLU_RS22505	0.43	-0.6
5,063,982	+		PFLU_RS22505	0.43	-1.6
5,063,982	+		PFLU_RS22505	0.43	-1.5
5,063,982	+		PFLU_RS22505	0.43	+0.4
5,063,983	-		PFLU_RS22505	0.43	+3.7
5,064,046	-		PFLU_RS22505	0.45	+0.1
5,064,150	+		PFLU_RS22505	0.50	-1.1
5,064,150	+		PFLU_RS22505	0.50	-0.7
5,064,150	+		PFLU_RS22505	0.50	-0.3
5,064,150	+		PFLU_RS22505	0.50	+1.4
5,064,150	+		PFLU_RS22505	0.50	+0.9
5,064,150	+		PFLU_RS22505	0.50	+0.3
5,064,150	+		PFLU_RS22505	0.50	-0.2
5,064,150	+		PFLU_RS22505	0.50	-1.7
5,064,150	+		PFLU_RS22505	0.50	+1.7
5,064,150	+		PFLU_RS22505	0.50	-1.3
5,064,151	-		PFLU_RS22505	0.50	-1.7
5,064,151	-		PFLU_RS22505	0.50	+0.6
5,064,151	-		PFLU_RS22505	0.50	-1.9
5,064,151	-		PFLU_RS22505	0.50	-1.2
5,064,151	-		PFLU_RS22505	0.50	+1.8
5,064,151	-		PFLU_RS22505	0.50	-0.6
5,064,151	-		PFLU_RS22505	0.50	-1.8
5,064,151	-		PFLU_RS22505	0.50	-1.9
5,064,153	+		PFLU_RS22505	0.50	-0.4
5,064,183	+		PFLU_RS22505	0.51	-0.4
5,064,183	+		PFLU_RS22505	0.51	-1.4
5,064,183	+		PFLU_RS22505	0.51	-2.9
5,064,183	+		PFLU_RS22505	0.51	-0.7
5,064,184	-		PFLU_RS22505	0.51	-1.6
5,064,184	-		PFLU_RS22505	0.51	-2.4
5,064,184	-		PFLU_RS22505	0.51	+1.6
5,064,184	-		PFLU_RS22505	0.51	-0.4
5,064,184	-		PFLU_RS22505	0.51	-1.2
5,064,184	-		PFLU_RS22505	0.51	-2.3
5,064,184	-		PFLU_RS22505	0.51	-0.7
5,064,184	-		PFLU_RS22505	0.51	-2.6
5,064,186	+		PFLU_RS22505	0.51	-2.7
5,064,186	+		PFLU_RS22505	0.51	+0.6
5,064,187	-		PFLU_RS22505	0.51	-0.2
5,064,187	-		PFLU_RS22505	0.51	+0.1
5,064,249	+		PFLU_RS22505	0.54	+0.6
5,064,279	+		PFLU_RS22505	0.55	-0.1
5,064,280	-		PFLU_RS22505	0.55	-0.9
5,064,338	+		PFLU_RS22505	0.58	-2.5
5,064,386	+		PFLU_RS22505	0.60	+0.1
5,064,386	+		PFLU_RS22505	0.60	+0.9
5,064,386	+		PFLU_RS22505	0.60	+3.3
5,064,387	-		PFLU_RS22505	0.60	-0.6
5,064,387	-		PFLU_RS22505	0.60	+3.2
5,064,387	-		PFLU_RS22505	0.60	-1.9
5,064,387	-		PFLU_RS22505	0.60	+2.1
5,064,387	-		PFLU_RS22505	0.60	-1.2
5,064,387	-		PFLU_RS22505	0.60	-2.2
5,064,390	+		PFLU_RS22505	0.60	-0.4
5,064,390	+		PFLU_RS22505	0.60	-0.4
5,064,390	+		PFLU_RS22505	0.60	+0.0
5,064,390	+		PFLU_RS22505	0.60	-1.5
5,064,390	+		PFLU_RS22505	0.60	-0.2
5,064,390	+		PFLU_RS22505	0.60	+2.1
5,064,390	+		PFLU_RS22505	0.60	+1.7
5,064,391	-		PFLU_RS22505	0.60	-1.7
5,064,391	-		PFLU_RS22505	0.60	-1.9
5,064,391	-		PFLU_RS22505	0.60	-1.2
5,064,391	-		PFLU_RS22505	0.60	-0.4
5,064,391	-		PFLU_RS22505	0.60	-0.2
5,064,391	-		PFLU_RS22505	0.60	-1.4
5,064,391	-		PFLU_RS22505	0.60	+0.0
5,064,391	-		PFLU_RS22505	0.60	+2.8
5,064,391	-		PFLU_RS22505	0.60	-2.2
5,064,391	-		PFLU_RS22505	0.60	-1.6
5,064,391	-		PFLU_RS22505	0.60	-0.9
5,064,391	-		PFLU_RS22505	0.60	-1.4
5,064,391	-		PFLU_RS22505	0.60	-2.1
5,064,645	+		PFLU_RS22505	0.70	-1.7
5,064,645	+		PFLU_RS22505	0.70	-1.3
5,064,645	+		PFLU_RS22505	0.70	+1.3
5,064,645	+		PFLU_RS22505	0.70	-2.1
5,064,738	+		PFLU_RS22505	0.74	-1.0
5,064,739	-		PFLU_RS22505	0.74	+0.6
5,064,739	-		PFLU_RS22505	0.74	+0.2
5,064,739	-		PFLU_RS22505	0.74	-0.1
5,064,774	+		PFLU_RS22505	0.76	-1.7
5,064,774	+		PFLU_RS22505	0.76	-1.1
5,064,774	+		PFLU_RS22505	0.76	-0.2
5,064,774	+		PFLU_RS22505	0.76	+0.4
5,064,774	+		PFLU_RS22505	0.76	-1.7
5,064,774	+		PFLU_RS22505	0.76	+0.0
5,064,775	-		PFLU_RS22505	0.76	-1.2
5,064,775	-		PFLU_RS22505	0.76	-0.4
5,064,775	-		PFLU_RS22505	0.76	+0.2
5,064,775	-		PFLU_RS22505	0.76	-0.1
5,064,775	-		PFLU_RS22505	0.76	-1.2
5,064,795	+		PFLU_RS22505	0.77	+0.6
5,064,795	+		PFLU_RS22505	0.77	+1.6
5,064,795	+		PFLU_RS22505	0.77	+1.0
5,064,795	+		PFLU_RS22505	0.77	-1.6
5,064,796	-		PFLU_RS22505	0.77	-1.2
5,064,828	+		PFLU_RS22505	0.78	-1.1
5,064,828	+		PFLU_RS22505	0.78	-0.7
5,064,828	+		PFLU_RS22505	0.78	-0.1
5,064,828	+		PFLU_RS22505	0.78	+0.7
5,064,828	+		PFLU_RS22505	0.78	-0.1
5,064,828	+		PFLU_RS22505	0.78	-1.3
5,064,828	+		PFLU_RS22505	0.78	-1.2
5,064,828	+		PFLU_RS22505	0.78	-1.0
5,064,828	+		PFLU_RS22505	0.78	+0.4
5,064,828	+		PFLU_RS22505	0.78	-1.4
5,064,828	+		PFLU_RS22505	0.78	-2.2
5,064,828	+		PFLU_RS22505	0.78	-2.7
5,064,828	+		PFLU_RS22505	0.78	+2.0
5,064,829	-		PFLU_RS22505	0.78	+1.1
5,064,829	-		PFLU_RS22505	0.78	+0.3
5,064,829	-		PFLU_RS22505	0.78	+0.0
5,064,829	-		PFLU_RS22505	0.78	-0.7
5,064,829	-		PFLU_RS22505	0.78	+0.0
5,064,829	-		PFLU_RS22505	0.78	-2.8
5,064,829	-		PFLU_RS22505	0.78	-0.4
5,064,829	-		PFLU_RS22505	0.78	+1.1
5,064,829	-		PFLU_RS22505	0.78	+0.0
5,064,829	-		PFLU_RS22505	0.78	-0.3
5,064,829	-		PFLU_RS22505	0.78	-2.6
5,064,829	-		PFLU_RS22505	0.78	+0.3
5,064,831	+		PFLU_RS22505	0.78	-1.3
5,064,831	+		PFLU_RS22505	0.78	+0.0
5,064,831	+		PFLU_RS22505	0.78	+3.0
5,064,831	+		PFLU_RS22505	0.78	-0.3
5,064,831	+		PFLU_RS22505	0.78	-1.9
5,064,831	+		PFLU_RS22505	0.78	-0.1
5,064,831	+		PFLU_RS22505	0.78	+3.6
5,064,831	+		PFLU_RS22505	0.78	+2.8
5,064,831	+		PFLU_RS22505	0.78	-1.4
5,064,831	+		PFLU_RS22505	0.78	+0.0
5,064,831	+		PFLU_RS22505	0.78	-1.7
5,064,832	-		PFLU_RS22505	0.78	-2.3
5,064,832	-		PFLU_RS22505	0.78	-2.2
5,064,832	-		PFLU_RS22505	0.78	-0.4
5,064,834	+		PFLU_RS22505	0.78	-2.2
5,064,834	+		PFLU_RS22505	0.78	+1.0
5,064,835	-		PFLU_RS22505	0.78	-1.6
5,064,835	-		PFLU_RS22505	0.78	-2.3
5,064,888	+		PFLU_RS22505	0.81	-0.4
5,064,888	+		PFLU_RS22505	0.81	-1.6
5,064,888	+		PFLU_RS22505	0.81	-2.4
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5,064,889	-		PFLU_RS22505	0.81	-0.4
5,064,889	-		PFLU_RS22505	0.81	+0.9
5,064,889	-		PFLU_RS22505	0.81	-0.5
5,065,056	+		PFLU_RS22505	0.88	-1.2
5,065,056	+		PFLU_RS22505	0.88	+0.3
5,065,056	+		PFLU_RS22505	0.88	-1.6
5,065,056	+		PFLU_RS22505	0.88	+0.6
5,065,056	+		PFLU_RS22505	0.88	-2.2
5,065,056	+		PFLU_RS22505	0.88	-0.9
5,065,056	+		PFLU_RS22505	0.88	-1.6
5,065,057	-		PFLU_RS22505	0.88	+0.0
5,065,057	-		PFLU_RS22505	0.88	+0.4
5,065,057	-		PFLU_RS22505	0.88	+1.6
5,065,057	-		PFLU_RS22505	0.88	+1.5
5,065,057	-		PFLU_RS22505	0.88	-1.1
5,065,353	+				-0.6
5,065,353	+				-0.7
5,065,354	-				+2.8
5,065,402	+				-2.3
5,065,403	-				-2.2
5,065,414	+				-1.0
5,065,414	+				+1.4
5,065,414	+				+0.8
5,065,414	+				+2.5
5,065,414	+				+3.2
5,065,414	+				+0.6
5,065,414	+				+2.0
5,065,414	+				+1.6
5,065,415	-				-0.4
5,065,415	-				+0.7
5,065,415	-				+0.4
5,065,415	-				+1.1
5,065,415	-				+0.8
5,065,415	-				+3.2
5,065,415	-				+1.1
5,065,473	+				-1.5
5,065,473	+				+1.6
5,065,473	+				-1.0
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5,065,585	+		PFLU_RS22510	0.12	-2.3
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5,065,585	+		PFLU_RS22510	0.12	+1.6
5,065,585	+		PFLU_RS22510	0.12	-1.7
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5,065,643	+		PFLU_RS22510	0.19	-0.9
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5,065,644	-		PFLU_RS22510	0.19	-1.9
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5,065,903	+		PFLU_RS22510	0.50	-2.9
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5,065,976	+		PFLU_RS22510	0.58	-2.0
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5,065,977	-		PFLU_RS22510	0.58	-1.7
5,065,977	-		PFLU_RS22510	0.58	-2.1
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5,065,977	-		PFLU_RS22510	0.58	-1.3
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5,066,054	+		PFLU_RS22510	0.67	-0.7
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5,066,054	+		PFLU_RS22510	0.67	-0.4
5,066,054	+		PFLU_RS22510	0.67	-2.4
5,066,055	-		PFLU_RS22510	0.67	-2.6
5,066,055	-		PFLU_RS22510	0.67	-0.7
5,066,231	+		PFLU_RS22510	0.88	-1.8
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5,066,231	+		PFLU_RS22510	0.88	-2.9
5,066,231	+		PFLU_RS22510	0.88	+0.0
5,066,231	+		PFLU_RS22510	0.88	-2.7
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5,066,231	+		PFLU_RS22510	0.88	-2.8
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5,066,232	-		PFLU_RS22510	0.88	-2.5
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