Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05100

Experiment: p-Coumaric 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric 2 mM (C)
1,137,566	+				+1.0
1,137,566	+				+2.0
1,137,566	+				-0.6
1,137,567	-				-0.8
1,137,590	+				-1.8
1,137,590	+				+0.9
1,137,590	+				+0.7
1,137,590	+				-2.7
1,137,590	+				+1.6
1,137,590	+				+0.7
1,137,590	+				-1.3
1,137,590	+				-2.4
1,137,590	+				-1.9
1,137,590	+				+1.2
1,137,590	+				+0.5
1,137,590	+				-2.4
1,137,590	+				+0.7
1,137,590	+				-1.4
1,137,590	+				-3.2
1,137,590	+				-0.6
1,137,590	+				-2.3
1,137,590	+				+2.9
1,137,590	+				+3.7
1,137,590	+				-2.5
1,137,591	-				-0.8
1,137,591	-				-0.8
1,137,591	-				+1.1
1,137,591	-				+0.5
1,137,591	-				-0.3
1,137,591	-				-0.8
1,137,591	-				+1.1
1,137,591	-				+1.6
1,137,591	-				-0.1
1,137,591	-				-1.5
1,137,591	-				+0.2
1,137,591	-				+2.0
1,137,591	-				-0.8
1,137,591	-				+0.5
1,137,591	-				-2.5
1,137,591	-				-0.3
1,137,591	-				+1.0
1,137,591	-				+3.7
1,137,591	-				-0.7
1,137,591	-				+0.1
1,137,591	-				+0.5
1,137,591	-				-1.0
1,137,592	+				+1.0
1,137,592	+				-1.0
1,137,592	+				-0.7
1,137,592	+				-2.2
1,137,592	+				-0.0
1,137,592	+				-1.7
1,137,592	+				+0.8
1,137,593	-				-0.8
1,137,593	-				-0.1
1,137,593	-				+1.8
1,137,593	-				-2.2
1,137,593	-				+2.1
1,137,593	-				-1.4
1,137,593	-				-1.0
1,137,593	-				-1.8
1,137,593	-				-0.0
1,137,593	-				+0.5
1,137,596	+				+0.5
1,137,596	+				-2.8
1,137,596	+				-0.8
1,137,596	+				-0.8
1,137,596	+				-0.5
1,137,596	+				+0.1
1,137,596	+				+1.3
1,137,596	+				+1.1
1,137,596	+				+1.2
1,137,596	+				+0.9
1,137,596	+				-1.1
1,137,597	-				+0.6
1,137,597	-				-0.3
1,137,597	-				-0.7
1,137,597	-				-1.9
1,137,597	-				-0.2
1,137,597	-				+0.6
1,137,597	-				-1.7
1,137,597	-				-0.5
1,137,597	-				-0.3
1,137,597	-				+1.6
1,137,599	+				+1.8
1,137,599	+				-0.8
1,137,599	+				+2.0
1,137,599	+				+2.7
1,137,599	+				-0.0
1,137,600	-				+0.5
1,137,600	-				+1.5
1,137,618	-				-1.0
1,137,716	+		PFLU_RS05095	0.21	-1.0
1,137,716	+		PFLU_RS05095	0.21	+0.1
1,137,717	-		PFLU_RS05095	0.21	-1.7
1,137,803	+		PFLU_RS05095	0.35	+0.4
1,137,804	-		PFLU_RS05095	0.35	+0.5
1,137,804	-		PFLU_RS05095	0.35	+1.3
1,138,091	+		PFLU_RS05095	0.80	-1.8
1,138,091	+		PFLU_RS05095	0.80	+0.1
1,138,091	+		PFLU_RS05095	0.80	+3.2
1,138,091	+		PFLU_RS05095	0.80	+0.0
1,138,091	+		PFLU_RS05095	0.80	-0.9
1,138,091	+		PFLU_RS05095	0.80	-1.1
1,138,091	+		PFLU_RS05095	0.80	-1.1
1,138,091	+		PFLU_RS05095	0.80	+1.6
1,138,091	+		PFLU_RS05095	0.80	-0.3
1,138,091	+		PFLU_RS05095	0.80	+0.2
1,138,092	-		PFLU_RS05095	0.80	+1.0
1,138,092	-		PFLU_RS05095	0.80	-1.1
1,138,092	-		PFLU_RS05095	0.80	-2.0
1,138,214	+				+2.1
1,138,214	+				-0.8
1,138,214	+				-1.7
1,138,214	+				-1.8
1,138,215	-				-0.1
1,138,244	-				-2.0
1,138,357	+				+2.0
1,138,357	+				+0.2
1,138,357	+				+3.5
1,138,357	+				-0.7
1,138,357	+				+1.0
1,138,357	+				-1.4
1,138,357	+				-1.0
1,138,426	+				-0.1
1,138,426	+				-1.7
1,138,428	+				-2.3
1,138,428	+				+0.1
1,138,428	+				+1.4
1,138,429	-				+0.9
1,138,429	-				-0.0
1,138,429	-				+2.1
1,138,434	+				+2.0
1,138,434	+				-2.2
1,138,437	+				-1.3
1,138,437	+				+0.2
1,138,437	+				+0.0
1,138,438	-				+1.9
1,138,438	-				-0.3
1,138,438	-				-0.5
1,138,438	-				-3.0
1,138,438	-				-2.0
1,138,441	+				-0.5
1,138,441	+				+1.4
1,138,441	+				-1.2
1,138,441	+				+2.1
1,138,441	+				-0.8
1,138,441	+				+1.3
1,138,441	+				-0.8
1,138,441	+				+0.6
1,138,441	+				+0.8
1,138,441	+				-1.6
1,138,441	+				-0.4
1,138,441	+				-1.7
1,138,442	-				+0.8
1,138,442	-				+2.3
1,138,442	-				-2.4
1,138,442	-				-0.0
1,138,442	-				-0.1
1,138,442	-				+0.3
1,138,442	-				+0.7
1,138,442	-				-0.9
1,138,442	-				+0.0
1,138,442	-				-1.7
1,138,442	-				+1.0
1,138,507	+				+0.5
1,138,507	+				+0.8
1,138,579	+				-1.3
1,138,579	+				-0.8
1,138,579	+				-1.0
1,138,579	+				+0.6
1,138,580	-				+1.3
1,138,580	-				-0.9
1,138,580	-				+0.5
1,138,580	-				+1.7
1,138,580	-				-1.4
1,138,580	-				+3.5
1,138,583	+				-2.4
1,138,583	+				-0.8
1,138,583	+				-3.0
1,138,583	+				+2.0
1,138,583	+				+1.5
1,138,583	+				+0.6
1,138,583	+				-0.1
1,138,583	+				+2.0
1,138,583	+				+1.3
1,138,583	+				+1.4
1,138,583	+				-1.9
1,138,583	+				+0.3
1,138,583	+				+0.9
1,138,583	+				-2.2
1,138,583	+				+0.8
1,138,583	+				-1.3
1,138,583	+				-1.8
1,138,583	+				+0.0
1,138,583	+				-1.3
1,138,583	+				+0.0
1,138,583	+				+2.6
1,138,583	+				+0.8
1,138,583	+				-0.3
1,138,583	+				-2.5
1,138,583	+				-1.1
1,138,583	+				+2.9
1,138,583	+				+0.9
1,138,583	+				+0.7
1,138,583	+				-2.4
1,138,584	-				+1.2
1,138,584	-				+1.0
1,138,584	-				+1.1
1,138,584	-				-0.4
1,138,584	-				-0.5
1,138,584	-				+0.2
1,138,584	-				-1.1
1,138,584	-				+0.7
1,138,584	-				+1.6
1,138,584	-				-0.8
1,138,584	-				-0.5
1,138,584	-				-1.4
1,138,584	-				+0.6
1,138,584	-				+0.0
1,138,584	-				-1.0
1,138,584	-				-1.3
1,138,584	-				-0.3
1,138,584	-				+0.9
1,138,584	-				+1.5
1,138,584	-				-1.4
1,138,584	-				-0.1
1,138,584	-				-1.0
1,138,584	-				-1.9
1,138,584	-				+2.6
1,138,584	-				+2.0
1,138,584	-				+0.5
1,138,676	+		PFLU_RS05100	0.16	+3.2
1,138,709	+		PFLU_RS05100	0.19	+2.0
1,138,710	-		PFLU_RS05100	0.19	-1.7
1,138,741	+		PFLU_RS05100	0.21	+1.3
1,138,741	+		PFLU_RS05100	0.21	-2.5
1,138,741	+		PFLU_RS05100	0.21	-0.8
1,138,742	-		PFLU_RS05100	0.21	-0.3
1,138,742	-		PFLU_RS05100	0.21	+0.0
1,138,742	-		PFLU_RS05100	0.21	-1.7
1,138,742	-		PFLU_RS05100	0.21	-1.0
1,138,742	-		PFLU_RS05100	0.21	-2.0
1,138,742	-		PFLU_RS05100	0.21	-1.1
1,138,742	-		PFLU_RS05100	0.21	-2.5
1,138,742	-		PFLU_RS05100	0.21	-0.9
1,138,807	-		PFLU_RS05100	0.26	-0.6
1,138,864	+		PFLU_RS05100	0.30	+0.8
1,138,865	-		PFLU_RS05100	0.30	-2.1
1,138,865	-		PFLU_RS05100	0.30	-0.5
1,138,865	-		PFLU_RS05100	0.30	-1.4
1,138,890	-		PFLU_RS05100	0.32	+1.0
1,139,084	-		PFLU_RS05100	0.46	+0.8
1,139,084	-		PFLU_RS05100	0.46	+0.3
1,139,084	-		PFLU_RS05100	0.46	-0.0
1,139,266	+		PFLU_RS05100	0.60	-1.3
1,139,266	+		PFLU_RS05100	0.60	+1.0
1,139,266	+		PFLU_RS05100	0.60	-2.8
1,139,266	+		PFLU_RS05100	0.60	-2.2
1,139,266	+		PFLU_RS05100	0.60	-0.6
1,139,266	+		PFLU_RS05100	0.60	-2.5
1,139,266	+		PFLU_RS05100	0.60	-1.0
1,139,267	-		PFLU_RS05100	0.60	-0.0
1,139,267	-		PFLU_RS05100	0.60	-2.5
1,139,267	-		PFLU_RS05100	0.60	+2.1
1,139,267	-		PFLU_RS05100	0.60	+0.3
1,139,267	-		PFLU_RS05100	0.60	+0.0
1,139,267	-		PFLU_RS05100	0.60	-1.4
1,139,491	+		PFLU_RS05100	0.76	-1.4
1,139,492	-		PFLU_RS05100	0.76	+1.1
1,139,492	-		PFLU_RS05100	0.76	+1.0
1,139,572	+		PFLU_RS05100	0.82	+0.0
1,139,573	-		PFLU_RS05100	0.82	+0.2
1,139,585	+		PFLU_RS05100	0.83	+1.2
1,139,585	+		PFLU_RS05100	0.83	+2.0
1,139,585	+		PFLU_RS05100	0.83	-1.9
1,139,585	+		PFLU_RS05100	0.83	-0.4
1,139,586	-		PFLU_RS05100	0.83	-1.4
1,139,586	-		PFLU_RS05100	0.83	-1.1
1,139,660	+		PFLU_RS05100	0.88	+1.8
1,139,660	+		PFLU_RS05100	0.88	-0.1
1,139,660	+		PFLU_RS05100	0.88	-2.8
1,139,660	+		PFLU_RS05100	0.88	-1.8
1,139,660	+		PFLU_RS05100	0.88	-0.8
1,139,660	+		PFLU_RS05100	0.88	-1.1
1,139,660	+		PFLU_RS05100	0.88	+0.7
1,139,660	+		PFLU_RS05100	0.88	+0.3
1,139,660	+		PFLU_RS05100	0.88	-1.2
1,139,660	+		PFLU_RS05100	0.88	+1.0
1,139,660	+		PFLU_RS05100	0.88	+0.3
1,139,660	+		PFLU_RS05100	0.88	+2.0
1,139,660	+		PFLU_RS05100	0.88	-1.3
1,139,660	+		PFLU_RS05100	0.88	+0.9
1,139,660	+		PFLU_RS05100	0.88	+0.5
1,139,660	+		PFLU_RS05100	0.88	-0.8
1,139,661	-		PFLU_RS05100	0.88	-1.8
1,139,661	-		PFLU_RS05100	0.88	-2.4
1,139,661	-		PFLU_RS05100	0.88	-2.2
1,139,661	-		PFLU_RS05100	0.88	-0.1
1,139,661	-		PFLU_RS05100	0.88	-2.2
1,139,661	-		PFLU_RS05100	0.88	-1.9
1,139,661	-		PFLU_RS05100	0.88	-2.3
1,139,661	-		PFLU_RS05100	0.88	-1.8
1,139,677	-		PFLU_RS05100	0.89	-2.2
1,139,677	-		PFLU_RS05100	0.89	+0.3
1,139,740	-				+1.8
1,139,794	-				-1.0
1,139,995	-		PFLU_RS05105	0.17	+0.3
1,139,995	-		PFLU_RS05105	0.17	-2.0
1,139,995	-		PFLU_RS05105	0.17	+1.1
1,140,015	+		PFLU_RS05105	0.19	+1.4
1,140,015	+		PFLU_RS05105	0.19	+2.2
1,140,016	-		PFLU_RS05105	0.19	+0.5
1,140,016	-		PFLU_RS05105	0.19	+1.3
1,140,281	+		PFLU_RS05105	0.52	-2.4
1,140,282	-		PFLU_RS05105	0.52	-0.0
1,140,282	-		PFLU_RS05105	0.52	-1.0
1,140,320	-		PFLU_RS05105	0.57	-0.4
1,140,691	+				-0.8
1,140,742	+				+0.5
1,140,742	+				-0.3
1,140,742	+				-0.7
1,140,742	+				-1.4
1,140,742	+				+0.0
1,140,742	+				-1.3
1,140,742	+				-2.6
1,140,742	+				-1.1
1,140,742	+				-0.5
1,140,742	+				-2.1
1,140,742	+				-0.8
1,140,742	+				-1.1
1,140,742	+				-1.8
1,140,742	+				-2.6
1,140,742	+				-2.4
1,140,742	+				+0.7
1,140,742	+				+0.1
1,140,742	+				-1.8
1,140,742	+				-0.2
1,140,742	+				+0.0
1,140,742	+				-0.3
1,140,743	-				+0.8
1,140,743	-				-2.8
1,140,743	-				+3.3
1,140,743	-				+0.0
1,140,743	-				+1.7
1,140,743	-				+0.5
1,140,743	-				+0.4
1,140,743	-				+1.2
1,140,743	-				+0.4
1,140,743	-				-0.7
1,140,743	-				-1.5
1,140,743	-				+0.2
1,140,743	-				-1.0
1,140,743	-				-1.8
1,140,743	-				+1.1
1,140,743	-				-1.0
1,140,743	-				-0.1
1,140,743	-				-0.8
1,140,743	-				+2.0
1,140,743	-				-0.8
1,140,743	-				-0.5
1,140,743	-				-1.9
1,140,743	-				-0.5
1,140,743	-				+1.1
1,140,773	+				+2.0
1,140,783	+				-1.1
1,140,783	+				-2.7
1,140,783	+				-0.1
1,140,810	+				-2.4
1,140,810	+				-1.9
1,140,810	+				-0.5
1,140,810	+				-2.0
1,140,810	+				+0.1
1,140,811	-				+0.7
1,140,811	-				-1.5
1,140,811	-				-0.8
1,140,811	-				-1.8
1,140,811	-				+1.1
1,140,811	-				-1.7
1,140,811	-				+2.6
1,140,811	-				-1.4
1,140,811	-				-0.2
1,140,812	+				+0.7
1,140,812	+				+0.1
1,140,812	+				-0.3
1,140,812	+				+0.0
1,140,812	+				+0.6
1,140,812	+				+1.7
1,140,812	+				+2.6
1,140,812	+				-1.2
1,140,812	+				-2.1
1,140,812	+				-0.5
1,140,812	+				+0.4
1,140,813	-				-1.1
1,140,813	-				+0.0
1,140,813	-				-3.0
1,140,813	-				+0.5
1,140,813	-				+0.8