Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2118

Experiment: nitrogen source nitrite 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 5mM
2,516,704	-		Pf6N2E2_2117	0.61	-4.1
2,516,704	-		Pf6N2E2_2117	0.61	-2.3
2,516,739	+		Pf6N2E2_2117	0.62	+0.4
2,516,739	+		Pf6N2E2_2117	0.62	-2.9
2,516,739	+		Pf6N2E2_2117	0.62	+0.4
2,516,740	-		Pf6N2E2_2117	0.62	+0.1
2,516,740	-		Pf6N2E2_2117	0.62	+1.9
2,516,802	+		Pf6N2E2_2117	0.65	-2.4
2,516,802	+		Pf6N2E2_2117	0.65	-1.8
2,516,982	+				-3.9
2,516,983	-		Pf6N2E2_2117	0.73	+1.9
2,516,983	-		Pf6N2E2_2117	0.73	-1.3
2,516,988	+		Pf6N2E2_2117	0.73	+1.9
2,516,988	+		Pf6N2E2_2117	0.73	-0.4
2,516,989	-		Pf6N2E2_2117	0.73	-2.0
2,516,989	-		Pf6N2E2_2117	0.73	-4.2
2,517,020	+		Pf6N2E2_2117	0.75	-1.1
2,517,020	+		Pf6N2E2_2117	0.75	+1.9
2,517,020	+		Pf6N2E2_2117	0.75	-2.4
2,517,021	-		Pf6N2E2_2117	0.75	-3.2
2,517,021	-		Pf6N2E2_2117	0.75	-2.3
2,517,021	-		Pf6N2E2_2117	0.75	+1.9
2,517,021	-		Pf6N2E2_2117	0.75	-3.8
2,517,021	-		Pf6N2E2_2117	0.75	-0.3
2,517,219	+		Pf6N2E2_2117	0.84	-0.1
2,517,219	+		Pf6N2E2_2117	0.84	-3.6
2,517,220	-		Pf6N2E2_2117	0.84	-2.3
2,517,255	+		Pf6N2E2_2117	0.85	-2.2
2,517,255	+		Pf6N2E2_2117	0.85	+1.9
2,517,306	+		Pf6N2E2_2117	0.88	-0.7
2,517,306	+		Pf6N2E2_2117	0.88	+0.1
2,517,306	+		Pf6N2E2_2117	0.88	-1.2
2,517,306	+		Pf6N2E2_2117	0.88	-0.4
2,517,307	-		Pf6N2E2_2117	0.88	-2.5
2,517,307	-		Pf6N2E2_2117	0.88	-0.4
2,517,699	-				-0.1
2,517,711	-				-2.6
2,517,786	+				+0.9
2,517,786	+				+0.9
2,517,787	-				-3.0
2,517,804	-				-2.6
2,517,923	+				+1.7
2,517,924	-				-0.9
2,517,924	-				+1.9
2,517,957	+		Pf6N2E2_2118	0.11	-1.1
2,517,957	+		Pf6N2E2_2118	0.11	-0.1
2,517,957	+		Pf6N2E2_2118	0.11	-2.7
2,517,957	+		Pf6N2E2_2118	0.11	+0.4
2,517,957	+		Pf6N2E2_2118	0.11	-2.2
2,517,957	+		Pf6N2E2_2118	0.11	+1.6
2,517,957	+		Pf6N2E2_2118	0.11	-0.3
2,517,957	+		Pf6N2E2_2118	0.11	+1.9
2,517,957	+		Pf6N2E2_2118	0.11	+0.9
2,517,958	-		Pf6N2E2_2118	0.11	-1.3
2,517,958	-		Pf6N2E2_2118	0.11	-2.5
2,517,958	-		Pf6N2E2_2118	0.11	+1.9
2,517,958	-		Pf6N2E2_2118	0.11	-1.6
2,517,958	-		Pf6N2E2_2118	0.11	-1.7
2,517,958	-		Pf6N2E2_2118	0.11	-1.1
2,517,958	-		Pf6N2E2_2118	0.11	-0.9
2,517,958	-		Pf6N2E2_2118	0.11	-0.4
2,517,958	-		Pf6N2E2_2118	0.11	-0.9
2,517,958	-		Pf6N2E2_2118	0.11	-3.8
2,517,958	-		Pf6N2E2_2118	0.11	-3.3
2,517,958	-		Pf6N2E2_2118	0.11	+1.9
2,517,959	+		Pf6N2E2_2118	0.11	-2.0
2,517,959	+		Pf6N2E2_2118	0.11	-2.9
2,517,959	+		Pf6N2E2_2118	0.11	+0.4
2,517,960	-		Pf6N2E2_2118	0.11	-3.3
2,517,960	-		Pf6N2E2_2118	0.11	-0.7
2,518,049	-		Pf6N2E2_2118	0.14	-2.1
2,518,321	+		Pf6N2E2_2118	0.22	-0.8
2,518,391	+		Pf6N2E2_2118	0.24	+1.4
2,518,391	+		Pf6N2E2_2118	0.24	+0.4
2,518,392	-		Pf6N2E2_2118	0.24	-2.9
2,518,493	+		Pf6N2E2_2118	0.27	+0.9
2,518,494	-		Pf6N2E2_2118	0.27	-2.2
2,518,596	-		Pf6N2E2_2118	0.30	-0.1
2,518,706	+		Pf6N2E2_2118	0.33	+0.4
2,518,706	+		Pf6N2E2_2118	0.33	-0.4
2,518,706	+		Pf6N2E2_2118	0.33	-1.9
2,518,706	+		Pf6N2E2_2118	0.33	-0.3
2,518,706	+		Pf6N2E2_2118	0.33	-1.7
2,518,706	+		Pf6N2E2_2118	0.33	+1.9
2,518,707	-		Pf6N2E2_2118	0.33	-0.4
2,518,707	-		Pf6N2E2_2118	0.33	+0.9
2,518,707	-		Pf6N2E2_2118	0.33	-1.4
2,518,707	-		Pf6N2E2_2118	0.33	-0.4
2,518,707	-		Pf6N2E2_2118	0.33	-3.0
2,518,707	-		Pf6N2E2_2118	0.33	+0.4
2,518,707	-		Pf6N2E2_2118	0.33	-3.4
2,518,707	-		Pf6N2E2_2118	0.33	-0.4
2,518,711	+		Pf6N2E2_2118	0.33	-0.1
2,518,711	+		Pf6N2E2_2118	0.33	-1.7
2,518,711	+		Pf6N2E2_2118	0.33	-1.7
2,518,711	+		Pf6N2E2_2118	0.33	-1.6
2,518,712	-		Pf6N2E2_2118	0.33	-1.0
2,518,712	-		Pf6N2E2_2118	0.33	+1.9
2,518,712	-		Pf6N2E2_2118	0.33	+0.4
2,518,961	+		Pf6N2E2_2118	0.41	-3.6
2,519,042	+		Pf6N2E2_2118	0.43	+0.2
2,519,043	-		Pf6N2E2_2118	0.43	-3.1
2,519,118	+		Pf6N2E2_2118	0.46	-1.5
2,519,118	+		Pf6N2E2_2118	0.46	+1.9
2,519,119	-		Pf6N2E2_2118	0.46	+1.9
2,519,119	-		Pf6N2E2_2118	0.46	-3.8
2,519,119	-		Pf6N2E2_2118	0.46	-1.4
2,519,119	-		Pf6N2E2_2118	0.46	-0.2
2,519,264	+		Pf6N2E2_2118	0.50	-0.9
2,519,264	+		Pf6N2E2_2118	0.50	-1.5
2,519,264	+		Pf6N2E2_2118	0.50	-0.1
2,519,265	-		Pf6N2E2_2118	0.50	+0.6
2,519,265	-		Pf6N2E2_2118	0.50	+0.9
2,519,265	-		Pf6N2E2_2118	0.50	-1.5
2,519,274	-		Pf6N2E2_2118	0.50	-1.2
2,519,360	+		Pf6N2E2_2118	0.53	-0.5
2,519,360	+		Pf6N2E2_2118	0.53	-1.6
2,519,462	+		Pf6N2E2_2118	0.56	-2.8
2,519,462	+		Pf6N2E2_2118	0.56	-2.2
2,519,463	-		Pf6N2E2_2118	0.56	+0.4
2,519,463	-		Pf6N2E2_2118	0.56	-2.1
2,519,463	-		Pf6N2E2_2118	0.56	+1.9
2,519,710	-		Pf6N2E2_2118	0.63	+1.9
2,519,735	+		Pf6N2E2_2118	0.64	-4.1
2,519,735	+		Pf6N2E2_2118	0.64	-1.3
2,519,735	+		Pf6N2E2_2118	0.64	-3.1
2,519,736	-		Pf6N2E2_2118	0.64	+1.9
2,519,736	-		Pf6N2E2_2118	0.64	+0.9
2,519,736	-		Pf6N2E2_2118	0.64	+1.9
2,519,768	+		Pf6N2E2_2118	0.65	-0.8
2,519,769	-		Pf6N2E2_2118	0.65	+0.0
2,519,769	-		Pf6N2E2_2118	0.65	-2.1
2,519,771	+		Pf6N2E2_2118	0.65	-1.5
2,519,903	+		Pf6N2E2_2118	0.69	-0.2
2,519,904	-		Pf6N2E2_2118	0.69	+1.9
2,519,904	-		Pf6N2E2_2118	0.69	-1.4
2,519,904	-		Pf6N2E2_2118	0.69	+1.9
2,519,906	+		Pf6N2E2_2118	0.69	-1.8
2,519,907	-		Pf6N2E2_2118	0.69	+0.9
2,519,907	-		Pf6N2E2_2118	0.69	-2.6
2,519,907	-		Pf6N2E2_2118	0.69	-0.3
2,519,907	-		Pf6N2E2_2118	0.69	+0.6
2,519,907	-		Pf6N2E2_2118	0.69	-1.6
2,519,907	-		Pf6N2E2_2118	0.69	+0.4
2,519,918	+		Pf6N2E2_2118	0.69	-3.1
2,519,919	-		Pf6N2E2_2118	0.69	-2.1
2,519,919	-		Pf6N2E2_2118	0.69	-2.5
2,520,065	+		Pf6N2E2_2118	0.74	-3.1
2,520,065	+		Pf6N2E2_2118	0.74	-1.2
2,520,065	+		Pf6N2E2_2118	0.74	-1.2
2,520,065	+		Pf6N2E2_2118	0.74	-2.3
2,520,065	+		Pf6N2E2_2118	0.74	+0.4
2,520,065	+		Pf6N2E2_2118	0.74	-0.8
2,520,065	+		Pf6N2E2_2118	0.74	-0.4
2,520,065	+		Pf6N2E2_2118	0.74	-3.2
2,520,065	+		Pf6N2E2_2118	0.74	-2.3
2,520,066	-		Pf6N2E2_2118	0.74	-2.4
2,520,066	-		Pf6N2E2_2118	0.74	-0.9
2,520,066	-		Pf6N2E2_2118	0.74	-0.4
2,520,066	-		Pf6N2E2_2118	0.74	-0.9
2,520,066	-		Pf6N2E2_2118	0.74	+1.9
2,520,146	+		Pf6N2E2_2118	0.76	-0.1
2,520,146	+		Pf6N2E2_2118	0.76	-1.4
2,520,146	+		Pf6N2E2_2118	0.76	-1.1
2,520,203	+		Pf6N2E2_2118	0.78	-0.9
2,520,293	+		Pf6N2E2_2118	0.81	-2.4
2,520,294	-		Pf6N2E2_2118	0.81	-2.4
2,520,410	+		Pf6N2E2_2118	0.84	-0.1
2,520,411	-		Pf6N2E2_2118	0.84	+0.3
2,520,411	-		Pf6N2E2_2118	0.84	-1.9
2,520,411	-		Pf6N2E2_2118	0.84	-3.1
2,520,428	+		Pf6N2E2_2118	0.85	-1.6
2,520,500	+		Pf6N2E2_2118	0.87	+0.9
2,520,500	+		Pf6N2E2_2118	0.87	-1.2
2,520,527	+		Pf6N2E2_2118	0.88	-1.6
2,520,527	+		Pf6N2E2_2118	0.88	+0.6
2,520,528	-		Pf6N2E2_2118	0.88	-0.4
2,520,675	+				-1.6
2,520,746	+				-2.9
2,520,792	-				-0.1
2,520,792	-				+1.9
2,520,860	-				-0.1
2,520,872	+				+1.2
2,520,991	+		Pf6N2E2_2119	0.15	+0.9
2,520,991	+		Pf6N2E2_2119	0.15	-0.5
2,520,991	+		Pf6N2E2_2119	0.15	+0.9
2,520,991	+		Pf6N2E2_2119	0.15	-2.6
2,520,992	-		Pf6N2E2_2119	0.16	-1.0
2,520,992	-		Pf6N2E2_2119	0.16	-1.6
2,520,992	-		Pf6N2E2_2119	0.16	-0.6
2,520,992	-		Pf6N2E2_2119	0.16	-0.4
2,521,202	-				+1.9
2,521,228	+				-1.6
2,521,229	-				-1.9
2,521,435	+		Pf6N2E2_2120	0.14	-0.4
2,521,435	+		Pf6N2E2_2120	0.14	+0.9
2,521,435	+		Pf6N2E2_2120	0.14	-0.1
2,521,435	+		Pf6N2E2_2120	0.14	-2.1
2,521,457	+		Pf6N2E2_2120	0.15	-1.1
2,521,458	-		Pf6N2E2_2120	0.15	+1.9
2,521,484	+		Pf6N2E2_2120	0.16	-1.8
2,521,484	+		Pf6N2E2_2120	0.16	+0.9
2,521,570	+		Pf6N2E2_2120	0.20	-2.1
2,521,571	-		Pf6N2E2_2120	0.20	-5.9
2,521,571	-		Pf6N2E2_2120	0.20	-2.4
2,521,621	+		Pf6N2E2_2120	0.23	+0.7
2,521,621	+		Pf6N2E2_2120	0.23	-3.0
2,521,621	+		Pf6N2E2_2120	0.23	-1.5
2,521,621	+		Pf6N2E2_2120	0.23	-0.9
2,521,621	+		Pf6N2E2_2120	0.23	-1.8
2,521,621	+		Pf6N2E2_2120	0.23	-1.1
2,521,621	+		Pf6N2E2_2120	0.23	-0.6
2,521,622	-		Pf6N2E2_2120	0.23	-1.6
2,521,622	-		Pf6N2E2_2120	0.23	-3.3
2,521,744	+		Pf6N2E2_2120	0.29	+0.5
2,521,784	-		Pf6N2E2_2120	0.31	-1.9
2,521,823	-		Pf6N2E2_2120	0.33	-3.4
2,521,823	-		Pf6N2E2_2120	0.33	-1.2
2,521,823	-		Pf6N2E2_2120	0.33	-1.5
2,521,828	+		Pf6N2E2_2120	0.33	-0.4
2,521,828	+		Pf6N2E2_2120	0.33	-2.3
2,521,828	+		Pf6N2E2_2120	0.33	+1.9
2,521,828	+		Pf6N2E2_2120	0.33	-0.3
2,521,828	+		Pf6N2E2_2120	0.33	-0.1
2,521,829	-		Pf6N2E2_2120	0.33	-2.2
2,521,829	-		Pf6N2E2_2120	0.33	-3.6
2,521,829	-		Pf6N2E2_2120	0.33	+1.9
2,521,829	-		Pf6N2E2_2120	0.33	-2.3
2,521,829	-		Pf6N2E2_2120	0.33	-2.4
2,521,913	-		Pf6N2E2_2120	0.37	-0.4