Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11835

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,622,890	-				+0.1
2,622,890	-				+0.4
2,622,890	-				-1.3
2,622,982	+				+0.1
2,622,982	+				+0.7
2,622,982	+				+0.5
2,622,983	-				+0.9
2,622,983	-				-1.4
2,622,983	-				+0.7
2,622,983	-				-0.1
2,622,983	-				-0.1
2,622,984	+				-2.1
2,622,984	+				+1.1
2,622,985	-				+0.9
2,622,985	-				-0.3
2,622,985	-				-1.8
2,622,994	+				+0.5
2,622,995	-				-0.7
2,622,995	-				-0.1
2,623,124	-				-0.9
2,623,124	-				-2.4
2,623,140	-				-1.2
2,623,164	+				+1.4
2,623,165	-				-0.1
2,623,165	-				+0.2
2,623,183	-		PFLU_RS11830	0.15	+0.2
2,623,183	-		PFLU_RS11830	0.15	-0.4
2,623,222	-		PFLU_RS11830	0.28	-0.2
2,623,325	+		PFLU_RS11830	0.62	-0.4
2,623,326	-		PFLU_RS11830	0.63	-1.1
2,623,340	+		PFLU_RS11830	0.67	-0.4
2,623,489	-				+0.4
2,623,489	-				-0.9
2,623,754	+		PFLU_RS11835	0.15	+0.0
2,623,754	+		PFLU_RS11835	0.15	+1.7
2,623,754	+		PFLU_RS11835	0.15	+0.4
2,623,755	-		PFLU_RS11835	0.16	+1.3
2,623,755	-		PFLU_RS11835	0.16	+1.4
2,623,837	+		PFLU_RS11835	0.28	+0.9
2,623,893	-		PFLU_RS11835	0.37	+0.1
2,623,912	+		PFLU_RS11835	0.40	-1.3
2,623,913	-		PFLU_RS11835	0.40	-0.7
2,623,913	-		PFLU_RS11835	0.40	+0.1
2,623,973	-		PFLU_RS11835	0.49	+1.2
2,623,973	-		PFLU_RS11835	0.49	+0.4
2,623,994	+		PFLU_RS11835	0.53	-0.1
2,623,994	+		PFLU_RS11835	0.53	+0.4
2,623,994	+		PFLU_RS11835	0.53	+0.6
2,623,995	-		PFLU_RS11835	0.53	+0.4
2,624,082	+		PFLU_RS11835	0.66	+0.4
2,624,082	+		PFLU_RS11835	0.66	-1.3
2,624,083	-		PFLU_RS11835	0.66	+0.6
2,624,083	-		PFLU_RS11835	0.66	+1.6
2,624,083	-		PFLU_RS11835	0.66	-0.1
2,624,083	-		PFLU_RS11835	0.66	+1.6
2,624,083	-		PFLU_RS11835	0.66	-0.4
2,624,083	-		PFLU_RS11835	0.66	+0.9
2,624,083	-		PFLU_RS11835	0.66	+1.6
2,624,164	-		PFLU_RS11835	0.79	+1.5
2,624,345	-				-0.7
2,624,419	+		PFLU_RS11840	0.23	-0.3
2,624,420	-		PFLU_RS11840	0.23	+0.1
2,624,473	+		PFLU_RS11840	0.32	+0.4
2,624,473	+		PFLU_RS11840	0.32	-0.3
2,624,473	+		PFLU_RS11840	0.32	+1.1
2,624,473	+		PFLU_RS11840	0.32	+0.9
2,624,474	-		PFLU_RS11840	0.33	+0.5
2,624,479	+		PFLU_RS11840	0.34	+0.9
2,624,642	-		PFLU_RS11840	0.63	+2.5
2,624,839	+				+0.1
2,624,839	+				+0.7
2,624,840	-				+0.9
2,624,857	-				+0.9
2,624,869	-				-0.4
2,624,869	-				+0.9
2,624,869	-				+0.3
2,624,869	-				-0.5
2,624,869	-				-1.0
2,625,180	+		PFLU_RS11845	0.32	-0.0
2,625,212	+		PFLU_RS11845	0.36	-0.7