Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12590

Experiment: m-Inositol 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m-Inositol 10 mM (C)
2,842,880	+		PFLU_RS12585	0.77	-2.3
2,842,880	+		PFLU_RS12585	0.77	-2.6
2,842,881	-		PFLU_RS12585	0.77	-3.1
2,842,892	-		PFLU_RS12585	0.78	-3.9
2,842,915	-		PFLU_RS12585	0.79	-2.9
2,842,915	-		PFLU_RS12585	0.79	-1.6
2,842,915	-		PFLU_RS12585	0.79	-0.9
2,842,952	+		PFLU_RS12585	0.81	-3.0
2,842,988	+		PFLU_RS12585	0.83	-2.5
2,842,989	-		PFLU_RS12585	0.83	-2.5
2,842,989	-		PFLU_RS12585	0.83	-3.9
2,842,989	-		PFLU_RS12585	0.83	-2.4
2,843,085	-		PFLU_RS12585	0.88	-4.0
2,843,164	+				-2.3
2,843,328	+				+1.9
2,843,328	+				-0.1
2,843,328	+				-0.7
2,843,329	-				-2.7
2,843,492	+				+1.1
2,843,492	+				-1.4
2,843,492	+				+0.1
2,843,492	+				-1.2
2,843,493	-				-2.5
2,843,493	-				-2.1
2,843,493	-				-2.5
2,843,511	-				-3.8
2,843,521	-				-2.3
2,843,523	+				-0.3
2,843,523	+				-1.3
2,843,746	+		PFLU_RS12590	0.23	-2.9
2,843,845	+		PFLU_RS12590	0.35	-3.0
2,843,845	+		PFLU_RS12590	0.35	-2.5
2,843,845	+		PFLU_RS12590	0.35	-2.3
2,843,846	-		PFLU_RS12590	0.35	-1.9
2,843,846	-		PFLU_RS12590	0.35	-3.6
2,843,932	+		PFLU_RS12590	0.44	-3.4
2,843,933	-		PFLU_RS12590	0.44	-1.3
2,843,965	-		PFLU_RS12590	0.48	-1.6
2,843,992	+		PFLU_RS12590	0.51	-1.6
2,843,993	-		PFLU_RS12590	0.51	-3.7
2,843,993	-		PFLU_RS12590	0.51	-2.1
2,844,013	+		PFLU_RS12590	0.53	-3.3
2,844,013	+		PFLU_RS12590	0.53	-2.6
2,844,013	+		PFLU_RS12590	0.53	-1.9
2,844,014	-		PFLU_RS12590	0.53	-2.8
2,844,014	-		PFLU_RS12590	0.53	-3.1
2,844,097	+		PFLU_RS12590	0.63	-3.4
2,844,097	+		PFLU_RS12590	0.63	-3.2
2,844,097	+		PFLU_RS12590	0.63	-3.5
2,844,097	+		PFLU_RS12590	0.63	-1.9
2,844,097	+		PFLU_RS12590	0.63	-0.3
2,844,097	+		PFLU_RS12590	0.63	-2.6
2,844,097	+		PFLU_RS12590	0.63	-3.3
2,844,097	+		PFLU_RS12590	0.63	-3.7
2,844,097	+		PFLU_RS12590	0.63	-4.1
2,844,098	-		PFLU_RS12590	0.63	-2.4
2,844,098	-		PFLU_RS12590	0.63	-1.9
2,844,098	-		PFLU_RS12590	0.63	-3.6
2,844,098	-		PFLU_RS12590	0.63	-3.5
2,844,098	-		PFLU_RS12590	0.63	-2.5
2,844,098	-		PFLU_RS12590	0.63	-3.5
2,844,098	-		PFLU_RS12590	0.63	-3.1
2,844,138	+		PFLU_RS12590	0.67	-3.1
2,844,138	+		PFLU_RS12590	0.67	-3.3
2,844,147	+		PFLU_RS12590	0.68	-3.7
2,844,311	-		PFLU_RS12590	0.87	-2.3
2,844,364	+				-1.7
2,844,364	+				-2.0
2,844,364	+				-3.1
2,844,364	+				-1.6
2,844,364	+				-2.9
2,844,364	+				-2.1
2,844,364	+				-1.2
2,844,364	+				-2.6
2,844,364	+				-2.3
2,844,364	+				-3.5
2,844,364	+				-2.3
2,844,365	-				-2.1
2,844,365	-				-2.1
2,844,365	-				-3.0
2,844,365	-				-2.3
2,844,365	-				-1.6
2,844,365	-				-2.2
2,844,365	-				-2.0
2,844,365	-				-3.1
2,844,365	-				-0.9
2,844,365	-				-2.1
2,844,365	-				-2.7
2,844,365	-				-1.3
2,844,365	-				-2.9
2,844,366	+				-2.3
2,844,366	+				-4.1
2,844,366	+				-2.1
2,844,366	+				-3.3
2,844,366	+				-2.6
2,844,366	+				-3.1
2,844,366	+				-2.4
2,844,366	+				-2.3
2,844,366	+				+0.7
2,844,366	+				-3.5
2,844,366	+				-2.3
2,844,366	+				-2.5
2,844,366	+				-2.6
2,844,367	-				-3.8
2,844,367	-				-3.2
2,844,367	-				-3.7
2,844,367	-				-3.9
2,844,367	-				-3.0
2,844,367	-				-1.6
2,844,367	-				-1.7
2,844,367	-				-0.3
2,844,367	-				-1.7
2,844,367	-				-0.9
2,844,367	-				-2.5
2,844,367	-				-0.9
2,844,367	-				-2.6
2,844,367	-				-2.9
2,844,367	-				-2.3
2,844,367	-				-3.5
2,844,370	+				-2.7
2,844,370	+				-2.3
2,844,370	+				-1.6
2,844,370	+				-3.1
2,844,370	+				-4.3
2,844,370	+				-3.7
2,844,370	+				-2.7
2,844,371	-				-3.3
2,844,371	-				-1.6
2,844,371	-				-3.2
2,844,371	-				-3.0
2,844,371	-				-0.9
2,844,371	-				-1.9
2,844,371	-				-2.1
2,844,385	+				-2.6
2,844,395	+				-0.7
2,844,395	+				+0.3
2,844,395	+				+0.1
2,844,395	+				+1.2
2,844,395	+				+1.1
2,844,395	+				+0.1
2,844,395	+				+0.9
2,844,395	+				+0.3
2,844,395	+				-0.4
2,844,396	-				-2.6
2,844,396	-				-3.0
2,844,396	-				-2.7
2,844,396	-				-3.5
2,844,446	+				-3.1
2,844,495	+				-2.6
2,844,495	+				-2.6
2,844,496	-				-2.3
2,844,496	-				-3.1
2,844,496	-				-1.3
2,844,581	-		PFLU_RS12595	0.20	-1.5
2,844,676	-		PFLU_RS12595	0.32	-2.3
2,844,721	+		PFLU_RS12595	0.37	-1.9
2,844,722	-		PFLU_RS12595	0.38	-1.9
2,844,722	-		PFLU_RS12595	0.38	+0.7
2,844,722	-		PFLU_RS12595	0.38	-4.5
2,844,828	+		PFLU_RS12595	0.51	-2.6
2,844,829	-		PFLU_RS12595	0.51	-4.1
2,844,915	+		PFLU_RS12595	0.62	-1.3
2,844,975	+		PFLU_RS12595	0.70	-1.6
2,844,975	+		PFLU_RS12595	0.70	-1.4
2,844,975	+		PFLU_RS12595	0.70	-2.8
2,844,975	+		PFLU_RS12595	0.70	-2.8
2,844,975	+		PFLU_RS12595	0.70	-3.7
2,844,975	+		PFLU_RS12595	0.70	-3.1
2,844,975	+		PFLU_RS12595	0.70	-3.4
2,844,975	+		PFLU_RS12595	0.70	-2.5
2,844,975	+		PFLU_RS12595	0.70	-2.9
2,844,976	-		PFLU_RS12595	0.70	-1.9
2,844,976	-		PFLU_RS12595	0.70	-1.2
2,844,976	-		PFLU_RS12595	0.70	-3.8
2,844,976	-		PFLU_RS12595	0.70	-1.8
2,844,976	-		PFLU_RS12595	0.70	-2.1
2,844,976	-		PFLU_RS12595	0.70	-4.1
2,844,978	+		PFLU_RS12595	0.70	-3.2
2,844,978	+		PFLU_RS12595	0.70	-2.3
2,844,978	+		PFLU_RS12595	0.70	+0.7
2,844,978	+		PFLU_RS12595	0.70	-3.5
2,844,978	+		PFLU_RS12595	0.70	-2.1
2,844,979	-		PFLU_RS12595	0.70	-2.8
2,845,023	+		PFLU_RS12595	0.76	-2.8
2,845,023	+		PFLU_RS12595	0.76	-1.6
2,845,023	+		PFLU_RS12595	0.76	-0.3
2,845,024	-		PFLU_RS12595	0.76	-3.2
2,845,024	-		PFLU_RS12595	0.76	-0.3
2,845,024	-		PFLU_RS12595	0.76	-2.5
2,845,096	-		PFLU_RS12595	0.85	-0.3
2,845,096	-		PFLU_RS12595	0.85	-1.9
2,845,116	+		PFLU_RS12595	0.87	-3.3
2,845,122	+		PFLU_RS12595	0.88	-2.6
2,845,123	-		PFLU_RS12595	0.88	-2.3
2,845,131	+		PFLU_RS12595	0.89	-2.9
2,845,131	+		PFLU_RS12595	0.89	-3.1
2,845,131	+		PFLU_RS12595	0.89	-3.5
2,845,132	-		PFLU_RS12595	0.89	-2.5
2,845,132	-		PFLU_RS12595	0.89	-1.3
2,845,132	-		PFLU_RS12595	0.89	-0.9
2,845,134	+		PFLU_RS12595	0.90	-2.5
2,845,134	+		PFLU_RS12595	0.90	-1.3
2,845,134	+		PFLU_RS12595	0.90	-3.0
2,845,134	+		PFLU_RS12595	0.90	-2.6
2,845,135	-		PFLU_RS12595	0.90	-0.9
2,845,135	-		PFLU_RS12595	0.90	-1.1
2,845,135	-		PFLU_RS12595	0.90	-1.1
2,845,145	-				-1.3
2,845,145	-				-3.1
2,845,145	-				-3.1
2,845,145	-				-3.3
2,845,145	-				-1.3
2,845,145	-				-0.5
2,845,212	+				+1.1
2,845,256	+				-2.4
2,845,256	+				-2.5