Experiment: Tween 20 (C), 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01955 and A4249_RS01960 are separated by 105 nucleotides A4249_RS01960 and A4249_RS01965 are separated by 190 nucleotides A4249_RS01965 and A4249_RS01970 overlap by 4 nucleotides A4249_RS01970 and A4249_RS01975 are separated by 1 nucleotides
A4249_RS01955: A4249_RS01955 - efflux RND transporter periplasmic adaptor subunit, at 393,498 to 394,460
_RS01955
A4249_RS01960: A4249_RS01960 - hypothetical protein, at 394,566 to 394,886
_RS01960
A4249_RS01965: A4249_RS01965 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 395,077 to 395,718
_RS01965
A4249_RS01970: A4249_RS01970 - 2-dehydro-3-deoxygalactonokinase, at 395,715 to 396,605
_RS01970
A4249_RS01975: A4249_RS01975 - sodium/sugar symporter, at 396,607 to 398,181
_RS01975
Position (kb) 395
396 Strain fitness (log2 ratio) -1
0
1
2
3 at 394.407 kb on + strand at 394.444 kb on + strand at 394.444 kb on + strand at 394.444 kb on + strand at 394.444 kb on + strand at 394.444 kb on + strand at 394.444 kb on + strand at 394.444 kb on + strand at 394.444 kb on + strand at 394.444 kb on + strand at 394.444 kb on + strand at 394.445 kb on - strand at 394.445 kb on - strand at 394.445 kb on - strand at 394.445 kb on - strand at 394.445 kb on - strand at 394.445 kb on - strand at 394.445 kb on - strand at 394.445 kb on - strand at 394.445 kb on - strand at 394.919 kb on + strand at 394.919 kb on + strand at 394.919 kb on + strand at 394.920 kb on - strand at 395.021 kb on - strand at 395.043 kb on + strand at 395.043 kb on + strand at 395.043 kb on + strand at 395.043 kb on + strand at 395.044 kb on - strand at 395.044 kb on - strand at 395.044 kb on - strand at 395.061 kb on + strand at 395.061 kb on + strand at 395.062 kb on - strand at 395.074 kb on + strand at 395.096 kb on - strand at 395.439 kb on + strand, within A4249_RS01965 at 395.440 kb on - strand, within A4249_RS01965 at 395.440 kb on - strand, within A4249_RS01965 at 395.440 kb on - strand, within A4249_RS01965 at 395.821 kb on + strand, within A4249_RS01970 at 395.822 kb on - strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.921 kb on - strand, within A4249_RS01970 at 395.921 kb on - strand, within A4249_RS01970 at 395.921 kb on - strand, within A4249_RS01970 at 395.921 kb on - strand, within A4249_RS01970 at 395.921 kb on - strand, within A4249_RS01970 at 396.092 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.365 kb on - strand, within A4249_RS01970 at 396.365 kb on - strand, within A4249_RS01970 at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.623 kb on + strand at 396.623 kb on + strand at 396.623 kb on + strand at 396.624 kb on - strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.687 kb on - strand at 396.687 kb on - strand at 396.687 kb on - strand at 396.687 kb on - strand at 396.687 kb on - strand at 396.687 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 30C remove 394,407 + +0.1 394,444 + -0.5 394,444 + -0.4 394,444 + -1.0 394,444 + +1.5 394,444 + -0.9 394,444 + +1.9 394,444 + -0.1 394,444 + -0.9 394,444 + +0.2 394,444 + +0.6 394,445 - +1.1 394,445 - +0.7 394,445 - +0.2 394,445 - +1.3 394,445 - +1.7 394,445 - -0.4 394,445 - +0.6 394,445 - +0.1 394,445 - -0.4 394,919 + +0.7 394,919 + -1.1 394,919 + -0.1 394,920 - +0.5 395,021 - -0.5 395,043 + +0.5 395,043 + +0.7 395,043 + +1.2 395,043 + -0.9 395,044 - +0.1 395,044 - +0.7 395,044 - -0.6 395,061 + +1.1 395,061 + -1.0 395,062 - +0.7 395,074 + +1.1 395,096 - +1.4 395,439 + A4249_RS01965 0.56 +1.3 395,440 - A4249_RS01965 0.57 -0.6 395,440 - A4249_RS01965 0.57 +0.5 395,440 - A4249_RS01965 0.57 +0.7 395,821 + A4249_RS01970 0.12 +0.0 395,822 - A4249_RS01970 0.12 -0.9 395,920 + A4249_RS01970 0.23 +1.0 395,920 + A4249_RS01970 0.23 +0.1 395,920 + A4249_RS01970 0.23 -1.3 395,920 + A4249_RS01970 0.23 +0.8 395,920 + A4249_RS01970 0.23 -0.2 395,920 + A4249_RS01970 0.23 +0.9 395,920 + A4249_RS01970 0.23 -0.7 395,920 + A4249_RS01970 0.23 -0.4 395,920 + A4249_RS01970 0.23 +2.8 395,920 + A4249_RS01970 0.23 +1.3 395,921 - A4249_RS01970 0.23 +0.1 395,921 - A4249_RS01970 0.23 -0.4 395,921 - A4249_RS01970 0.23 +0.8 395,921 - A4249_RS01970 0.23 +0.4 395,921 - A4249_RS01970 0.23 -1.7 396,092 + A4249_RS01970 0.42 -0.8 396,364 + A4249_RS01970 0.73 -0.4 396,364 + A4249_RS01970 0.73 +0.7 396,364 + A4249_RS01970 0.73 +0.0 396,364 + A4249_RS01970 0.73 +0.1 396,364 + A4249_RS01970 0.73 +0.6 396,364 + A4249_RS01970 0.73 -0.5 396,365 - A4249_RS01970 0.73 +0.3 396,365 - A4249_RS01970 0.73 +2.3 396,621 + +0.7 396,621 + -0.7 396,621 + +0.3 396,621 + +0.3 396,621 + -0.2 396,621 + -1.2 396,621 + +0.5 396,621 + +0.1 396,621 + +0.4 396,622 - +0.7 396,622 - +1.3 396,622 - -0.3 396,622 - +1.3 396,622 - -0.6 396,623 + +0.3 396,623 + +1.3 396,623 + +0.2 396,624 - +2.2 396,686 + +0.2 396,686 + -1.0 396,686 + +0.1 396,686 + -1.0 396,686 + -0.0 396,686 + -0.6 396,686 + +0.0 396,686 + -0.2 396,686 + +0.5 396,686 + +0.5 396,686 + +0.3 396,687 - +0.4 396,687 - +2.9 396,687 - -0.0 396,687 - +0.5 396,687 - -0.1 396,687 - -0.8
Or see this region's nucleotide sequence