Experiment: R2A_PIPES with Aluminum chloride 0.28125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt atoE and OKGIIK_11940 are separated by 113 nucleotides OKGIIK_11940 and OKGIIK_11945 are separated by 12 nucleotides
OKGIIK_11935: atoE - Short chain fatty acid transporter, at 2,569,224 to 2,570,636
atoE
OKGIIK_11940: OKGIIK_11940 - MacB-PCD domain-containing protein, at 2,570,750 to 2,572,075
_11940
OKGIIK_11945: OKGIIK_11945 - FtsX-like permease family, at 2,572,088 to 2,573,254
_11945
Position (kb)
2570
2571
2572
2573 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2569.780 kb on + strand, within atoE at 2569.866 kb on + strand, within atoE at 2569.866 kb on + strand, within atoE at 2569.866 kb on + strand, within atoE at 2569.867 kb on - strand, within atoE at 2569.867 kb on - strand, within atoE at 2569.867 kb on - strand, within atoE at 2569.974 kb on + strand, within atoE at 2569.974 kb on + strand, within atoE at 2569.974 kb on + strand, within atoE at 2569.974 kb on + strand, within atoE at 2569.975 kb on - strand, within atoE at 2570.079 kb on + strand, within atoE at 2570.079 kb on + strand, within atoE at 2570.079 kb on + strand, within atoE at 2570.079 kb on + strand, within atoE at 2570.079 kb on + strand, within atoE at 2570.080 kb on - strand, within atoE at 2570.080 kb on - strand, within atoE at 2570.080 kb on - strand, within atoE at 2570.080 kb on - strand, within atoE at 2570.196 kb on + strand, within atoE at 2570.197 kb on - strand, within atoE at 2570.197 kb on - strand, within atoE at 2570.197 kb on - strand, within atoE at 2570.323 kb on - strand, within atoE at 2570.385 kb on + strand, within atoE at 2570.385 kb on + strand, within atoE at 2570.385 kb on + strand, within atoE at 2570.385 kb on + strand, within atoE at 2570.385 kb on + strand, within atoE at 2570.385 kb on + strand, within atoE at 2570.385 kb on + strand, within atoE at 2570.385 kb on + strand, within atoE at 2570.385 kb on + strand, within atoE at 2570.386 kb on - strand, within atoE at 2570.386 kb on - strand, within atoE at 2570.386 kb on - strand, within atoE at 2570.386 kb on - strand, within atoE at 2570.386 kb on - strand, within atoE at 2570.386 kb on - strand, within atoE at 2570.386 kb on - strand, within atoE at 2570.386 kb on - strand, within atoE at 2570.386 kb on - strand, within atoE at 2570.386 kb on - strand, within atoE at 2570.386 kb on - strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.442 kb on + strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.443 kb on - strand, within atoE at 2570.538 kb on + strand at 2570.539 kb on - strand at 2570.593 kb on + strand at 2570.594 kb on - strand at 2570.594 kb on - strand at 2570.613 kb on + strand at 2570.613 kb on + strand at 2570.613 kb on + strand at 2570.613 kb on + strand at 2570.613 kb on + strand at 2570.613 kb on + strand at 2570.614 kb on - strand at 2570.614 kb on - strand at 2570.614 kb on - strand at 2570.614 kb on - strand at 2570.614 kb on - strand at 2570.614 kb on - strand at 2570.614 kb on - strand at 2570.614 kb on - strand at 2570.646 kb on + strand at 2570.647 kb on - strand at 2570.647 kb on - strand at 2570.647 kb on - strand at 2570.647 kb on - strand at 2570.647 kb on - strand at 2570.647 kb on - strand at 2570.647 kb on - strand at 2570.712 kb on + strand at 2570.712 kb on + strand at 2570.751 kb on + strand at 2570.902 kb on + strand, within OKGIIK_11940 at 2570.902 kb on + strand, within OKGIIK_11940 at 2570.929 kb on - strand, within OKGIIK_11940 at 2570.929 kb on - strand, within OKGIIK_11940 at 2570.929 kb on - strand, within OKGIIK_11940 at 2571.094 kb on + strand, within OKGIIK_11940 at 2571.094 kb on + strand, within OKGIIK_11940 at 2571.094 kb on + strand, within OKGIIK_11940 at 2571.094 kb on + strand, within OKGIIK_11940 at 2571.095 kb on - strand, within OKGIIK_11940 at 2571.095 kb on - strand, within OKGIIK_11940 at 2571.095 kb on - strand, within OKGIIK_11940 at 2571.095 kb on - strand, within OKGIIK_11940 at 2571.096 kb on - strand, within OKGIIK_11940 at 2571.195 kb on + strand, within OKGIIK_11940 at 2571.195 kb on + strand, within OKGIIK_11940 at 2571.195 kb on + strand, within OKGIIK_11940 at 2571.195 kb on + strand, within OKGIIK_11940 at 2571.196 kb on - strand, within OKGIIK_11940 at 2571.196 kb on - strand, within OKGIIK_11940 at 2571.196 kb on - strand, within OKGIIK_11940 at 2571.321 kb on + strand, within OKGIIK_11940 at 2571.321 kb on + strand, within OKGIIK_11940 at 2571.322 kb on - strand, within OKGIIK_11940 at 2571.322 kb on - strand, within OKGIIK_11940 at 2571.322 kb on - strand, within OKGIIK_11940 at 2571.326 kb on - strand, within OKGIIK_11940 at 2571.326 kb on - strand, within OKGIIK_11940 at 2571.796 kb on - strand, within OKGIIK_11940 at 2572.345 kb on + strand, within OKGIIK_11945 at 2572.345 kb on + strand, within OKGIIK_11945 at 2572.345 kb on + strand, within OKGIIK_11945 at 2572.346 kb on - strand, within OKGIIK_11945 at 2572.346 kb on - strand, within OKGIIK_11945 at 2572.620 kb on + strand, within OKGIIK_11945 at 2572.620 kb on + strand, within OKGIIK_11945 at 2572.620 kb on + strand, within OKGIIK_11945 at 2572.620 kb on + strand, within OKGIIK_11945 at 2572.620 kb on + strand, within OKGIIK_11945 at 2572.620 kb on + strand, within OKGIIK_11945 at 2572.620 kb on + strand, within OKGIIK_11945 at 2572.621 kb on - strand, within OKGIIK_11945 at 2572.621 kb on - strand, within OKGIIK_11945 at 2572.621 kb on - strand, within OKGIIK_11945 at 2572.621 kb on - strand, within OKGIIK_11945 at 2572.621 kb on - strand, within OKGIIK_11945 at 2572.621 kb on - strand, within OKGIIK_11945 at 2572.621 kb on - strand, within OKGIIK_11945 at 2572.642 kb on + strand, within OKGIIK_11945 at 2572.642 kb on + strand, within OKGIIK_11945 at 2572.644 kb on + strand, within OKGIIK_11945 at 2572.644 kb on + strand, within OKGIIK_11945 at 2572.644 kb on + strand, within OKGIIK_11945 at 2572.644 kb on + strand, within OKGIIK_11945 at 2572.644 kb on + strand, within OKGIIK_11945 at 2572.644 kb on + strand, within OKGIIK_11945 at 2572.645 kb on - strand, within OKGIIK_11945 at 2572.645 kb on - strand, within OKGIIK_11945 at 2572.665 kb on + strand, within OKGIIK_11945 at 2572.665 kb on + strand, within OKGIIK_11945 at 2572.665 kb on - strand, within OKGIIK_11945 at 2572.666 kb on - strand, within OKGIIK_11945 at 2572.666 kb on - strand, within OKGIIK_11945 at 2572.666 kb on - strand, within OKGIIK_11945 at 2572.666 kb on - strand, within OKGIIK_11945 at 2572.824 kb on + strand, within OKGIIK_11945 at 2572.824 kb on + strand, within OKGIIK_11945 at 2572.824 kb on + strand, within OKGIIK_11945 at 2572.824 kb on + strand, within OKGIIK_11945 at 2572.825 kb on - strand, within OKGIIK_11945 at 2572.825 kb on - strand, within OKGIIK_11945 at 2572.825 kb on - strand, within OKGIIK_11945 at 2572.825 kb on - strand, within OKGIIK_11945 at 2572.825 kb on - strand, within OKGIIK_11945 at 2572.825 kb on - strand, within OKGIIK_11945 at 2572.825 kb on - strand, within OKGIIK_11945 at 2572.825 kb on - strand, within OKGIIK_11945 at 2572.825 kb on - strand, within OKGIIK_11945 at 2572.825 kb on - strand, within OKGIIK_11945 at 2572.914 kb on + strand, within OKGIIK_11945 at 2572.915 kb on - strand, within OKGIIK_11945 at 2572.915 kb on - strand, within OKGIIK_11945 at 2572.915 kb on - strand, within OKGIIK_11945 at 2572.915 kb on - strand, within OKGIIK_11945 at 2572.926 kb on + strand, within OKGIIK_11945 at 2572.926 kb on + strand, within OKGIIK_11945 at 2572.926 kb on + strand, within OKGIIK_11945 at 2572.926 kb on + strand, within OKGIIK_11945 at 2572.926 kb on + strand, within OKGIIK_11945 at 2572.926 kb on + strand, within OKGIIK_11945 at 2572.926 kb on + strand, within OKGIIK_11945 at 2572.927 kb on - strand, within OKGIIK_11945 at 2572.927 kb on - strand, within OKGIIK_11945 at 2572.927 kb on - strand, within OKGIIK_11945 at 2572.927 kb on - strand, within OKGIIK_11945 at 2572.927 kb on - strand, within OKGIIK_11945 at 2572.927 kb on - strand, within OKGIIK_11945 at 2572.927 kb on - strand, within OKGIIK_11945 at 2572.927 kb on - strand, within OKGIIK_11945 at 2572.974 kb on + strand, within OKGIIK_11945 at 2572.975 kb on - strand, within OKGIIK_11945 at 2572.975 kb on - strand, within OKGIIK_11945
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.28125 mM remove 2,569,780 + atoE OKGIIK_11935 0.39 -1.0 2,569,866 + atoE OKGIIK_11935 0.45 -0.0 2,569,866 + atoE OKGIIK_11935 0.45 +0.2 2,569,866 + atoE OKGIIK_11935 0.45 +1.0 2,569,867 - atoE OKGIIK_11935 0.46 -0.5 2,569,867 - atoE OKGIIK_11935 0.46 -1.0 2,569,867 - atoE OKGIIK_11935 0.46 -0.2 2,569,974 + atoE OKGIIK_11935 0.53 -1.2 2,569,974 + atoE OKGIIK_11935 0.53 +0.2 2,569,974 + atoE OKGIIK_11935 0.53 -1.8 2,569,974 + atoE OKGIIK_11935 0.53 +0.4 2,569,975 - atoE OKGIIK_11935 0.53 -0.1 2,570,079 + atoE OKGIIK_11935 0.61 +0.3 2,570,079 + atoE OKGIIK_11935 0.61 +0.4 2,570,079 + atoE OKGIIK_11935 0.61 -1.2 2,570,079 + atoE OKGIIK_11935 0.61 -1.0 2,570,079 + atoE OKGIIK_11935 0.61 -0.2 2,570,080 - atoE OKGIIK_11935 0.61 -1.7 2,570,080 - atoE OKGIIK_11935 0.61 +0.1 2,570,080 - atoE OKGIIK_11935 0.61 -2.2 2,570,080 - atoE OKGIIK_11935 0.61 +0.4 2,570,196 + atoE OKGIIK_11935 0.69 +0.8 2,570,197 - atoE OKGIIK_11935 0.69 -1.2 2,570,197 - atoE OKGIIK_11935 0.69 +0.1 2,570,197 - atoE OKGIIK_11935 0.69 +0.2 2,570,323 - atoE OKGIIK_11935 0.78 +0.1 2,570,385 + atoE OKGIIK_11935 0.82 -1.4 2,570,385 + atoE OKGIIK_11935 0.82 -0.9 2,570,385 + atoE OKGIIK_11935 0.82 +0.9 2,570,385 + atoE OKGIIK_11935 0.82 -1.5 2,570,385 + atoE OKGIIK_11935 0.82 -1.2 2,570,385 + atoE OKGIIK_11935 0.82 +0.2 2,570,385 + atoE OKGIIK_11935 0.82 -0.5 2,570,385 + atoE OKGIIK_11935 0.82 -0.2 2,570,385 + atoE OKGIIK_11935 0.82 -0.0 2,570,386 - atoE OKGIIK_11935 0.82 -1.8 2,570,386 - atoE OKGIIK_11935 0.82 +0.9 2,570,386 - atoE OKGIIK_11935 0.82 +0.2 2,570,386 - atoE OKGIIK_11935 0.82 -0.8 2,570,386 - atoE OKGIIK_11935 0.82 -1.7 2,570,386 - atoE OKGIIK_11935 0.82 -0.0 2,570,386 - atoE OKGIIK_11935 0.82 -0.3 2,570,386 - atoE OKGIIK_11935 0.82 -0.4 2,570,386 - atoE OKGIIK_11935 0.82 +1.6 2,570,386 - atoE OKGIIK_11935 0.82 -0.7 2,570,386 - atoE OKGIIK_11935 0.82 -0.1 2,570,442 + atoE OKGIIK_11935 0.86 -0.4 2,570,442 + atoE OKGIIK_11935 0.86 +1.5 2,570,442 + atoE OKGIIK_11935 0.86 -0.1 2,570,442 + atoE OKGIIK_11935 0.86 -0.2 2,570,442 + atoE OKGIIK_11935 0.86 -0.0 2,570,442 + atoE OKGIIK_11935 0.86 -0.7 2,570,442 + atoE OKGIIK_11935 0.86 -0.0 2,570,442 + atoE OKGIIK_11935 0.86 -0.7 2,570,442 + atoE OKGIIK_11935 0.86 +0.9 2,570,442 + atoE OKGIIK_11935 0.86 -0.3 2,570,442 + atoE OKGIIK_11935 0.86 -0.0 2,570,442 + atoE OKGIIK_11935 0.86 +0.6 2,570,442 + atoE OKGIIK_11935 0.86 +1.3 2,570,442 + atoE OKGIIK_11935 0.86 +0.5 2,570,443 - atoE OKGIIK_11935 0.86 -0.2 2,570,443 - atoE OKGIIK_11935 0.86 -1.2 2,570,443 - atoE OKGIIK_11935 0.86 +0.8 2,570,443 - atoE OKGIIK_11935 0.86 -2.8 2,570,443 - atoE OKGIIK_11935 0.86 -0.3 2,570,443 - atoE OKGIIK_11935 0.86 +0.2 2,570,443 - atoE OKGIIK_11935 0.86 -1.0 2,570,443 - atoE OKGIIK_11935 0.86 -0.8 2,570,443 - atoE OKGIIK_11935 0.86 +1.8 2,570,443 - atoE OKGIIK_11935 0.86 +0.2 2,570,443 - atoE OKGIIK_11935 0.86 -0.4 2,570,443 - atoE OKGIIK_11935 0.86 +0.4 2,570,538 + +0.2 2,570,539 - +0.0 2,570,593 + +1.1 2,570,594 - -0.2 2,570,594 - -1.8 2,570,613 + +0.5 2,570,613 + -0.5 2,570,613 + -0.7 2,570,613 + -0.2 2,570,613 + +0.1 2,570,613 + -0.8 2,570,614 - +0.8 2,570,614 - -2.1 2,570,614 - -0.5 2,570,614 - -1.5 2,570,614 - -0.4 2,570,614 - +0.3 2,570,614 - +0.8 2,570,614 - +1.4 2,570,646 + -1.7 2,570,647 - +0.1 2,570,647 - -0.2 2,570,647 - -0.4 2,570,647 - -0.4 2,570,647 - -0.1 2,570,647 - -0.5 2,570,647 - -0.3 2,570,712 + +0.8 2,570,712 + -1.2 2,570,751 + -0.5 2,570,902 + OKGIIK_11940 0.11 +1.1 2,570,902 + OKGIIK_11940 0.11 +1.0 2,570,929 - OKGIIK_11940 0.13 -1.2 2,570,929 - OKGIIK_11940 0.13 -1.7 2,570,929 - OKGIIK_11940 0.13 -1.3 2,571,094 + OKGIIK_11940 0.26 -0.1 2,571,094 + OKGIIK_11940 0.26 -0.7 2,571,094 + OKGIIK_11940 0.26 +0.1 2,571,094 + OKGIIK_11940 0.26 -0.5 2,571,095 - OKGIIK_11940 0.26 -0.2 2,571,095 - OKGIIK_11940 0.26 +1.0 2,571,095 - OKGIIK_11940 0.26 -0.5 2,571,095 - OKGIIK_11940 0.26 -1.2 2,571,096 - OKGIIK_11940 0.26 -0.0 2,571,195 + OKGIIK_11940 0.34 -0.2 2,571,195 + OKGIIK_11940 0.34 -1.4 2,571,195 + OKGIIK_11940 0.34 -0.0 2,571,195 + OKGIIK_11940 0.34 +0.8 2,571,196 - OKGIIK_11940 0.34 -1.0 2,571,196 - OKGIIK_11940 0.34 -1.0 2,571,196 - OKGIIK_11940 0.34 +0.0 2,571,321 + OKGIIK_11940 0.43 +1.8 2,571,321 + OKGIIK_11940 0.43 -0.4 2,571,322 - OKGIIK_11940 0.43 -2.5 2,571,322 - OKGIIK_11940 0.43 -0.2 2,571,322 - OKGIIK_11940 0.43 +0.9 2,571,326 - OKGIIK_11940 0.43 +0.8 2,571,326 - OKGIIK_11940 0.43 -1.0 2,571,796 - OKGIIK_11940 0.79 +1.4 2,572,345 + OKGIIK_11945 0.22 -1.2 2,572,345 + OKGIIK_11945 0.22 +0.8 2,572,345 + OKGIIK_11945 0.22 -0.7 2,572,346 - OKGIIK_11945 0.22 +0.2 2,572,346 - OKGIIK_11945 0.22 -0.2 2,572,620 + OKGIIK_11945 0.46 +0.3 2,572,620 + OKGIIK_11945 0.46 +0.3 2,572,620 + OKGIIK_11945 0.46 +0.1 2,572,620 + OKGIIK_11945 0.46 +1.5 2,572,620 + OKGIIK_11945 0.46 +0.2 2,572,620 + OKGIIK_11945 0.46 +1.4 2,572,620 + OKGIIK_11945 0.46 +1.0 2,572,621 - OKGIIK_11945 0.46 +0.6 2,572,621 - OKGIIK_11945 0.46 +0.5 2,572,621 - OKGIIK_11945 0.46 -0.7 2,572,621 - OKGIIK_11945 0.46 -0.5 2,572,621 - OKGIIK_11945 0.46 -1.5 2,572,621 - OKGIIK_11945 0.46 -0.2 2,572,621 - OKGIIK_11945 0.46 +0.0 2,572,642 + OKGIIK_11945 0.47 -0.7 2,572,642 + OKGIIK_11945 0.47 -0.0 2,572,644 + OKGIIK_11945 0.48 -0.0 2,572,644 + OKGIIK_11945 0.48 -0.7 2,572,644 + OKGIIK_11945 0.48 +0.2 2,572,644 + OKGIIK_11945 0.48 +1.0 2,572,644 + OKGIIK_11945 0.48 -1.0 2,572,644 + OKGIIK_11945 0.48 +0.1 2,572,645 - OKGIIK_11945 0.48 +0.8 2,572,645 - OKGIIK_11945 0.48 -0.2 2,572,665 + OKGIIK_11945 0.49 -1.2 2,572,665 + OKGIIK_11945 0.49 +0.4 2,572,665 - OKGIIK_11945 0.49 -0.5 2,572,666 - OKGIIK_11945 0.50 +0.1 2,572,666 - OKGIIK_11945 0.50 +1.1 2,572,666 - OKGIIK_11945 0.50 -0.9 2,572,666 - OKGIIK_11945 0.50 -0.6 2,572,824 + OKGIIK_11945 0.63 +1.8 2,572,824 + OKGIIK_11945 0.63 +0.8 2,572,824 + OKGIIK_11945 0.63 +1.4 2,572,824 + OKGIIK_11945 0.63 -0.1 2,572,825 - OKGIIK_11945 0.63 +0.7 2,572,825 - OKGIIK_11945 0.63 +1.2 2,572,825 - OKGIIK_11945 0.63 -0.5 2,572,825 - OKGIIK_11945 0.63 +1.2 2,572,825 - OKGIIK_11945 0.63 +1.0 2,572,825 - OKGIIK_11945 0.63 -0.5 2,572,825 - OKGIIK_11945 0.63 +0.8 2,572,825 - OKGIIK_11945 0.63 -0.5 2,572,825 - OKGIIK_11945 0.63 -0.8 2,572,825 - OKGIIK_11945 0.63 -1.1 2,572,914 + OKGIIK_11945 0.71 +0.3 2,572,915 - OKGIIK_11945 0.71 +0.3 2,572,915 - OKGIIK_11945 0.71 +0.8 2,572,915 - OKGIIK_11945 0.71 +0.8 2,572,915 - OKGIIK_11945 0.71 -1.7 2,572,926 + OKGIIK_11945 0.72 +1.0 2,572,926 + OKGIIK_11945 0.72 -1.7 2,572,926 + OKGIIK_11945 0.72 -0.2 2,572,926 + OKGIIK_11945 0.72 -1.0 2,572,926 + OKGIIK_11945 0.72 -0.5 2,572,926 + OKGIIK_11945 0.72 +1.0 2,572,926 + OKGIIK_11945 0.72 -0.5 2,572,927 - OKGIIK_11945 0.72 -1.3 2,572,927 - OKGIIK_11945 0.72 -0.2 2,572,927 - OKGIIK_11945 0.72 -0.0 2,572,927 - OKGIIK_11945 0.72 -1.4 2,572,927 - OKGIIK_11945 0.72 -0.4 2,572,927 - OKGIIK_11945 0.72 -0.0 2,572,927 - OKGIIK_11945 0.72 -0.2 2,572,927 - OKGIIK_11945 0.72 -1.0 2,572,974 + OKGIIK_11945 0.76 +0.3 2,572,975 - OKGIIK_11945 0.76 -0.0 2,572,975 - OKGIIK_11945 0.76 +2.4
Or see this region's nucleotide sequence