Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS18365

Experiment: RPMI_TSB_serum temperature; 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RPMI_TSB_serum temperature; 30C
3,815,121	+		RR41_RS18360	0.44	-3.1
3,815,121	+		RR41_RS18360	0.44	+0.8
3,815,122	-		RR41_RS18360	0.44	+0.7
3,815,126	-		RR41_RS18360	0.44	-0.2
3,815,134	+		RR41_RS18360	0.45	+1.7
3,815,134	+		RR41_RS18360	0.45	-0.2
3,815,134	+		RR41_RS18360	0.45	-0.3
3,815,135	-		RR41_RS18360	0.45	+1.0
3,815,135	-		RR41_RS18360	0.45	-0.9
3,815,138	+		RR41_RS18360	0.45	+0.7
3,815,138	+		RR41_RS18360	0.45	-1.0
3,815,138	+		RR41_RS18360	0.45	+2.4
3,815,138	+		RR41_RS18360	0.45	-1.9
3,815,138	+		RR41_RS18360	0.45	-0.9
3,815,138	+		RR41_RS18360	0.45	+0.6
3,815,139	-		RR41_RS18360	0.45	+2.6
3,815,139	-		RR41_RS18360	0.45	-0.3
3,815,139	-		RR41_RS18360	0.45	+1.4
3,815,148	+		RR41_RS18360	0.46	-0.2
3,815,149	-		RR41_RS18360	0.46	-2.5
3,815,151	+		RR41_RS18360	0.46	+0.5
3,815,151	+		RR41_RS18360	0.46	-1.3
3,815,155	+		RR41_RS18360	0.46	-0.0
3,815,169	+		RR41_RS18360	0.47	-0.1
3,815,169	+		RR41_RS18360	0.47	+0.3
3,815,169	+		RR41_RS18360	0.47	-2.2
3,815,182	+		RR41_RS18360	0.48	-1.2
3,815,183	-		RR41_RS18360	0.48	-2.8
3,815,220	+		RR41_RS18360	0.51	-1.8
3,815,220	+		RR41_RS18360	0.51	-1.5
3,815,220	+		RR41_RS18360	0.51	-2.8
3,815,221	-		RR41_RS18360	0.51	+0.3
3,815,286	+		RR41_RS18360	0.56	-0.9
3,815,287	-		RR41_RS18360	0.56	-0.2
3,815,299	+		RR41_RS18360	0.56	+0.5
3,815,322	+		RR41_RS18360	0.58	-1.4
3,815,322	+		RR41_RS18360	0.58	+0.5
3,815,323	-		RR41_RS18360	0.58	-0.5
3,815,323	-		RR41_RS18360	0.58	-0.2
3,815,323	-		RR41_RS18360	0.58	+2.1
3,815,325	+		RR41_RS18360	0.58	-1.2
3,815,325	+		RR41_RS18360	0.58	-2.8
3,815,325	+		RR41_RS18360	0.58	-0.4
3,815,326	-		RR41_RS18360	0.58	-2.9
3,815,326	-		RR41_RS18360	0.58	-2.5
3,815,326	-		RR41_RS18360	0.58	+0.9
3,815,326	-		RR41_RS18360	0.58	+1.6
3,815,332	-		RR41_RS18360	0.59	-1.5
3,815,332	-		RR41_RS18360	0.59	+2.0
3,815,374	-		RR41_RS18360	0.62	-1.2
3,815,375	+		RR41_RS18360	0.62	+1.1
3,815,375	+		RR41_RS18360	0.62	-0.9
3,815,375	+		RR41_RS18360	0.62	+0.4
3,815,376	-		RR41_RS18360	0.62	-1.1
3,815,400	+		RR41_RS18360	0.63	+0.5
3,815,401	-		RR41_RS18360	0.64	+0.8
3,815,407	+		RR41_RS18360	0.64	+3.7
3,815,408	-		RR41_RS18360	0.64	+0.3
3,815,408	-		RR41_RS18360	0.64	-0.6
3,815,415	+		RR41_RS18360	0.65	+0.7
3,815,415	+		RR41_RS18360	0.65	-2.2
3,815,415	+		RR41_RS18360	0.65	+0.7
3,815,416	-		RR41_RS18360	0.65	-0.6
3,815,416	-		RR41_RS18360	0.65	-1.8
3,815,449	+		RR41_RS18360	0.67	-2.8
3,815,450	-		RR41_RS18360	0.67	-1.2
3,815,456	-		RR41_RS18360	0.67	-0.5
3,815,456	-		RR41_RS18360	0.67	-1.4
3,815,460	+		RR41_RS18360	0.68	-0.2
3,815,461	-		RR41_RS18360	0.68	-0.2
3,815,461	-		RR41_RS18360	0.68	+0.3
3,815,502	+		RR41_RS18360	0.71	+1.6
3,815,503	-		RR41_RS18360	0.71	-0.2
3,815,503	-		RR41_RS18360	0.71	-1.2
3,815,519	-		RR41_RS18360	0.72	+2.6
3,815,561	+		RR41_RS18360	0.75	+0.6
3,815,561	+		RR41_RS18360	0.75	-0.2
3,815,561	+		RR41_RS18360	0.75	+0.9
3,815,561	+		RR41_RS18360	0.75	+2.1
3,815,562	-		RR41_RS18360	0.75	+0.2
3,815,562	-		RR41_RS18360	0.75	-0.4
3,815,562	-		RR41_RS18360	0.75	+0.8
3,815,562	-		RR41_RS18360	0.75	+0.3
3,815,566	-		RR41_RS18360	0.75	-0.2
3,815,566	-		RR41_RS18360	0.75	+0.6
3,815,566	-		RR41_RS18360	0.75	-0.6
3,815,608	+		RR41_RS18360	0.78	-2.2
3,815,608	+		RR41_RS18360	0.78	-1.2
3,815,609	-		RR41_RS18360	0.78	+0.8
3,815,615	+		RR41_RS18360	0.78	-0.8
3,815,616	-		RR41_RS18360	0.78	+0.2
3,815,616	-		RR41_RS18360	0.78	-1.2
3,815,616	-		RR41_RS18360	0.78	+1.5
3,815,616	-		RR41_RS18360	0.78	-0.1
3,815,630	+		RR41_RS18360	0.79	+1.4
3,815,630	+		RR41_RS18360	0.79	+1.8
3,815,630	+		RR41_RS18360	0.79	-2.2
3,815,630	+		RR41_RS18360	0.79	-3.7
3,815,631	-		RR41_RS18360	0.80	-0.1
3,815,631	-		RR41_RS18360	0.80	+0.3
3,815,631	-		RR41_RS18360	0.80	-0.1
3,815,634	-		RR41_RS18360	0.80	+1.1
3,815,684	+		RR41_RS18360	0.83	-0.2
3,815,705	-		RR41_RS18360	0.85	-1.8
3,815,725	+		RR41_RS18360	0.86	+0.1
3,815,754	+		RR41_RS18360	0.88	-0.3
3,815,757	-		RR41_RS18360	0.88	+0.2
3,815,757	-		RR41_RS18360	0.88	+0.1
3,815,757	-		RR41_RS18360	0.88	+1.2
3,815,796	+				+0.2
3,815,812	+				-1.2
3,815,851	+				-2.8
3,815,851	+				+0.5
3,815,968	+				+1.0
3,815,987	+				-0.9
3,815,987	+				+0.3
3,815,988	-				-2.5
3,815,994	+				-0.2
3,815,994	+				+1.1
3,815,995	-				+1.4
3,816,037	+				-1.2
3,816,038	-				+0.1
3,816,041	+				-1.2
3,816,041	+				+0.4
3,816,041	+				-0.7
3,816,041	+				+0.0
3,816,041	+				-3.4
3,816,041	+				-0.5
3,816,042	-				+0.2
3,816,042	-				-1.8
3,816,056	-				+2.1
3,816,059	+				+1.1
3,816,059	+				-1.5
3,816,059	+				+0.2
3,816,059	+				+0.8
3,816,059	+				-0.2
3,816,059	+				-1.2
3,816,059	+				-2.0
3,816,059	+				-1.2
3,816,060	-				+0.1
3,816,060	-				+1.2
3,816,060	-				-1.2
3,816,089	+				-2.8
3,816,089	+				-0.9
3,816,185	-		RR41_RS18365	0.27	-1.1
3,816,208	+		RR41_RS18365	0.33	-1.5
3,816,208	+		RR41_RS18365	0.33	-0.5
3,816,209	-		RR41_RS18365	0.34	-2.5
3,816,209	-		RR41_RS18365	0.34	+2.1
3,816,209	-		RR41_RS18365	0.34	-1.5
3,816,274	-		RR41_RS18365	0.52	-1.8
3,816,352	-		RR41_RS18365	0.73	-2.3
3,816,371	+		RR41_RS18365	0.79	+1.0
3,816,420	+				-0.2
3,816,430	+				-0.4
3,816,430	+				-1.4
3,816,430	+				-0.2
3,816,431	-				-0.8
3,816,432	+				-0.2
3,816,433	-				+1.2
3,816,441	+				+0.1
3,816,442	-				-2.2
3,816,461	+				+0.4
3,816,462	-				-0.2
3,816,462	-				-3.5
3,816,462	-				+1.2
3,816,462	-				-0.7
3,816,469	+				+1.8
3,816,470	-				+2.6
3,816,472	+				+1.0
3,816,473	-				+1.7
3,816,547	+				-2.2
3,816,547	+				-0.2
3,816,548	-				-0.5
3,816,548	-				-0.2
3,816,548	-				-1.8
3,816,548	-				+0.4
3,816,551	+				-2.2
3,816,551	+				-0.2
3,816,566	-				+0.4
3,816,566	-				-2.5
3,816,595	+		RR41_RS18370	0.12	+3.1
3,816,640	+		RR41_RS18370	0.16	-1.8
3,816,640	+		RR41_RS18370	0.16	+0.9
3,816,646	+		RR41_RS18370	0.17	-2.5
3,816,646	+		RR41_RS18370	0.17	-0.1
3,816,664	+		RR41_RS18370	0.19	-3.3
3,816,686	+		RR41_RS18370	0.21	-1.4
3,816,794	+		RR41_RS18370	0.30	+0.2
3,816,794	+		RR41_RS18370	0.30	+0.3
3,816,795	-		RR41_RS18370	0.31	-0.7
3,816,842	+		RR41_RS18370	0.35	-1.2
3,816,842	+		RR41_RS18370	0.35	+1.8
3,816,842	+		RR41_RS18370	0.35	+0.2
3,816,843	-		RR41_RS18370	0.35	-1.3
3,816,843	-		RR41_RS18370	0.35	-0.0
3,816,843	-		RR41_RS18370	0.35	-2.2
3,816,843	-		RR41_RS18370	0.35	+0.4
3,816,843	-		RR41_RS18370	0.35	+0.2
3,816,843	-		RR41_RS18370	0.35	-1.1
3,816,877	+		RR41_RS18370	0.38	-1.2
3,816,877	+		RR41_RS18370	0.38	-1.4
3,816,877	+		RR41_RS18370	0.38	+2.6
3,816,877	+		RR41_RS18370	0.38	-0.5
3,816,878	-		RR41_RS18370	0.38	+1.0
3,816,878	-		RR41_RS18370	0.38	+0.6
3,816,880	+		RR41_RS18370	0.38	-2.5
3,816,880	+		RR41_RS18370	0.38	-0.2
3,816,880	+		RR41_RS18370	0.38	-2.2
3,816,880	+		RR41_RS18370	0.38	-0.4
3,816,880	+		RR41_RS18370	0.38	-3.2
3,816,880	+		RR41_RS18370	0.38	+1.1
3,816,880	+		RR41_RS18370	0.38	-0.2
3,816,881	-		RR41_RS18370	0.38	+0.1
3,816,881	-		RR41_RS18370	0.38	+0.8
3,816,881	-		RR41_RS18370	0.38	-0.7
3,816,934	-		RR41_RS18370	0.43	+1.1
3,816,934	-		RR41_RS18370	0.43	-0.2
3,816,976	+		RR41_RS18370	0.47	-1.2
3,816,977	-		RR41_RS18370	0.47	+1.2
3,816,979	+		RR41_RS18370	0.47	-1.1
3,816,979	+		RR41_RS18370	0.47	+0.7
3,816,979	+		RR41_RS18370	0.47	-0.6
3,816,979	+		RR41_RS18370	0.47	-2.5
3,816,979	+		RR41_RS18370	0.47	-1.8
3,816,980	-		RR41_RS18370	0.47	-0.9
3,816,980	-		RR41_RS18370	0.47	+1.0
3,817,045	+		RR41_RS18370	0.53	-1.8
3,817,124	-		RR41_RS18370	0.60	-0.1
3,817,127	+		RR41_RS18370	0.61	-0.2
3,817,149	+		RR41_RS18370	0.63	+0.8
3,817,149	+		RR41_RS18370	0.63	-0.8
3,817,149	+		RR41_RS18370	0.63	+0.3
3,817,150	-		RR41_RS18370	0.63	-3.7
3,817,150	-		RR41_RS18370	0.63	-2.0
3,817,150	-		RR41_RS18370	0.63	+0.1
3,817,150	-		RR41_RS18370	0.63	-2.1
3,817,150	-		RR41_RS18370	0.63	-1.2
3,817,150	-		RR41_RS18370	0.63	-1.2
3,817,180	+		RR41_RS18370	0.65	-0.2
3,817,180	+		RR41_RS18370	0.65	+2.3
3,817,180	+		RR41_RS18370	0.65	+0.1
3,817,181	-		RR41_RS18370	0.65	-0.5
3,817,181	-		RR41_RS18370	0.65	-1.8
3,817,181	-		RR41_RS18370	0.65	+0.1
3,817,258	+		RR41_RS18370	0.72	-0.3
3,817,273	+		RR41_RS18370	0.74	+2.1
3,817,273	+		RR41_RS18370	0.74	-0.5
3,817,282	-		RR41_RS18370	0.75	-1.8
3,817,298	+		RR41_RS18370	0.76	+0.8
3,817,298	+		RR41_RS18370	0.76	+0.3
3,817,353	-		RR41_RS18370	0.81	-1.2
3,817,412	-		RR41_RS18370	0.86	+1.4
3,817,412	-		RR41_RS18370	0.86	-0.2
3,817,423	-		RR41_RS18370	0.87	+0.6
3,817,446	+		RR41_RS18370	0.89	-0.2