Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02431

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,548,530	+		MPMX19_02429	0.57	+0.1
2,548,530	+		MPMX19_02429	0.57	+1.4
2,548,531	-		MPMX19_02429	0.57	-1.6
2,548,531	-		MPMX19_02429	0.57	-0.8
2,548,531	-		MPMX19_02429	0.57	-0.7
2,548,531	-		MPMX19_02429	0.57	-1.7
2,548,531	-		MPMX19_02429	0.57	-1.7
2,548,531	-		MPMX19_02429	0.57	-0.4
2,548,531	-		MPMX19_02429	0.57	-2.0
2,548,531	-		MPMX19_02429	0.57	+0.1
2,548,531	-		MPMX19_02429	0.57	+0.1
2,548,531	-		MPMX19_02429	0.57	-0.5
2,548,548	+		MPMX19_02429	0.59	-0.3
2,548,548	+		MPMX19_02429	0.59	+0.7
2,548,548	+		MPMX19_02429	0.59	+0.1
2,548,549	-		MPMX19_02429	0.59	-0.7
2,548,549	-		MPMX19_02429	0.59	-0.6
2,548,549	-		MPMX19_02429	0.59	-0.0
2,548,554	+		MPMX19_02429	0.60	-1.8
2,548,554	+		MPMX19_02429	0.60	-1.1
2,548,725	+		MPMX19_02429	0.80	-0.9
2,548,725	+		MPMX19_02429	0.80	+0.1
2,548,725	+		MPMX19_02429	0.80	+0.9
2,548,725	+		MPMX19_02429	0.80	-0.2
2,548,725	+		MPMX19_02429	0.80	-1.1
2,548,725	+		MPMX19_02429	0.80	-0.7
2,548,725	+		MPMX19_02429	0.80	-1.5
2,548,725	+		MPMX19_02429	0.80	-2.6
2,548,725	+		MPMX19_02429	0.80	-0.3
2,548,725	+		MPMX19_02429	0.80	-0.9
2,548,725	+		MPMX19_02429	0.80	-0.4
2,548,725	+		MPMX19_02429	0.80	+0.5
2,548,725	+		MPMX19_02429	0.80	+0.7
2,548,725	+		MPMX19_02429	0.80	-0.5
2,548,726	-		MPMX19_02429	0.80	+0.1
2,548,726	-		MPMX19_02429	0.80	+0.2
2,548,726	-		MPMX19_02429	0.80	+0.5
2,548,726	-		MPMX19_02429	0.80	+1.2
2,548,726	-		MPMX19_02429	0.80	+0.2
2,548,726	-		MPMX19_02429	0.80	+0.4
2,548,726	-		MPMX19_02429	0.80	-0.5
2,548,726	-		MPMX19_02429	0.80	-0.4
2,549,069	+		MPMX19_02430	0.33	-0.3
2,549,069	+		MPMX19_02430	0.33	-0.5
2,549,069	+		MPMX19_02430	0.33	+0.2
2,549,069	+		MPMX19_02430	0.33	-1.8
2,549,069	+		MPMX19_02430	0.33	+0.3
2,549,069	+		MPMX19_02430	0.33	-1.4
2,549,069	+		MPMX19_02430	0.33	+0.3
2,549,069	+		MPMX19_02430	0.33	-0.3
2,549,069	+		MPMX19_02430	0.33	-0.1
2,549,069	+		MPMX19_02430	0.33	-0.5
2,549,069	+		MPMX19_02430	0.33	-0.4
2,549,069	+		MPMX19_02430	0.33	+0.3
2,549,070	-		MPMX19_02430	0.33	-0.4
2,549,070	-		MPMX19_02430	0.33	-0.9
2,549,070	-		MPMX19_02430	0.33	-0.7
2,549,070	-		MPMX19_02430	0.33	-1.5
2,549,070	-		MPMX19_02430	0.33	-0.3
2,549,070	-		MPMX19_02430	0.33	+0.3
2,549,070	-		MPMX19_02430	0.33	-1.1
2,549,070	-		MPMX19_02430	0.33	-1.1
2,549,072	+		MPMX19_02430	0.33	-0.3
2,549,072	+		MPMX19_02430	0.33	-1.9
2,549,072	+		MPMX19_02430	0.33	-0.1
2,549,072	+		MPMX19_02430	0.33	+0.2
2,549,073	-		MPMX19_02430	0.34	-0.2
2,549,073	-		MPMX19_02430	0.34	-0.4
2,549,073	-		MPMX19_02430	0.34	-0.5
2,549,153	+		MPMX19_02430	0.50	-0.7
2,549,153	+		MPMX19_02430	0.50	-0.5
2,549,153	+		MPMX19_02430	0.50	-0.1
2,549,153	+		MPMX19_02430	0.50	-0.1
2,549,153	+		MPMX19_02430	0.50	-1.3
2,549,154	-		MPMX19_02430	0.50	+0.7
2,549,154	-		MPMX19_02430	0.50	-0.7
2,549,154	-		MPMX19_02430	0.50	+0.7
2,549,154	-		MPMX19_02430	0.50	-0.5
2,549,154	-		MPMX19_02430	0.50	-1.8
2,549,154	-		MPMX19_02430	0.50	+0.7
2,549,156	+		MPMX19_02430	0.51	-1.0
2,549,156	+		MPMX19_02430	0.51	-0.7
2,549,156	+		MPMX19_02430	0.51	-0.7
2,549,156	+		MPMX19_02430	0.51	-0.9
2,549,156	+		MPMX19_02430	0.51	+0.1
2,549,156	+		MPMX19_02430	0.51	-0.3
2,549,157	-		MPMX19_02430	0.51	-0.9
2,549,157	-		MPMX19_02430	0.51	-0.3
2,549,157	-		MPMX19_02430	0.51	-0.7
2,549,889	+		MPMX19_02431	0.26	-1.0
2,549,889	+		MPMX19_02431	0.26	-0.8
2,549,889	+		MPMX19_02431	0.26	+0.2
2,549,889	+		MPMX19_02431	0.26	-0.7
2,549,889	+		MPMX19_02431	0.26	+0.1
2,549,889	+		MPMX19_02431	0.26	-0.6
2,549,889	+		MPMX19_02431	0.26	+0.1
2,549,889	+		MPMX19_02431	0.26	-0.1
2,549,889	+		MPMX19_02431	0.26	-2.3
2,549,889	+		MPMX19_02431	0.26	-0.8
2,549,889	+		MPMX19_02431	0.26	+0.3
2,549,889	+		MPMX19_02431	0.26	-0.1
2,549,889	+		MPMX19_02431	0.26	-0.5
2,549,889	+		MPMX19_02431	0.26	+0.1
2,549,889	+		MPMX19_02431	0.26	-0.2
2,549,889	+		MPMX19_02431	0.26	-0.7
2,549,890	-		MPMX19_02431	0.26	-2.0
2,549,890	-		MPMX19_02431	0.26	-1.2
2,549,890	-		MPMX19_02431	0.26	-1.5
2,549,890	-		MPMX19_02431	0.26	-0.7
2,549,890	-		MPMX19_02431	0.26	-1.8
2,549,890	-		MPMX19_02431	0.26	-1.0
2,549,890	-		MPMX19_02431	0.26	+0.2
2,549,890	-		MPMX19_02431	0.26	+0.1
2,549,890	-		MPMX19_02431	0.26	-1.7
2,549,890	-		MPMX19_02431	0.26	-1.3
2,549,890	-		MPMX19_02431	0.26	-1.0
2,549,890	-		MPMX19_02431	0.26	-1.8
2,549,890	-		MPMX19_02431	0.26	-0.8
2,549,890	-		MPMX19_02431	0.26	+0.1
2,549,890	-		MPMX19_02431	0.26	-0.2
2,549,890	-		MPMX19_02431	0.26	+0.1
2,549,890	-		MPMX19_02431	0.26	+1.2
2,549,890	-		MPMX19_02431	0.26	+0.5
2,549,890	-		MPMX19_02431	0.26	-1.9
2,549,890	-		MPMX19_02431	0.26	-2.4
2,549,890	-		MPMX19_02431	0.26	-0.7
2,549,890	-		MPMX19_02431	0.26	-0.7
2,549,890	-		MPMX19_02431	0.26	-1.3
2,549,943	+		MPMX19_02431	0.29	-1.4
2,549,943	+		MPMX19_02431	0.29	-0.1
2,549,943	+		MPMX19_02431	0.29	-0.9
2,549,943	+		MPMX19_02431	0.29	+0.9
2,549,943	+		MPMX19_02431	0.29	-0.8
2,549,943	+		MPMX19_02431	0.29	+0.1
2,549,943	+		MPMX19_02431	0.29	+0.0
2,549,943	+		MPMX19_02431	0.29	-0.9
2,549,943	+		MPMX19_02431	0.29	-1.3
2,549,943	+		MPMX19_02431	0.29	+0.2
2,549,943	+		MPMX19_02431	0.29	-0.5
2,549,943	+		MPMX19_02431	0.29	+0.1
2,549,943	+		MPMX19_02431	0.29	+0.3
2,549,944	-		MPMX19_02431	0.29	-0.6
2,549,944	-		MPMX19_02431	0.29	+0.4
2,550,012	+		MPMX19_02431	0.33	+0.8
2,550,012	+		MPMX19_02431	0.33	-0.0
2,550,012	+		MPMX19_02431	0.33	-0.7
2,550,013	-		MPMX19_02431	0.33	-1.5
2,550,013	-		MPMX19_02431	0.33	+0.6
2,550,013	-		MPMX19_02431	0.33	-1.7
2,550,013	-		MPMX19_02431	0.33	-0.5
2,550,780	+		MPMX19_02431	0.74	-0.8
2,550,780	+		MPMX19_02431	0.74	-2.7
2,550,780	+		MPMX19_02431	0.74	-0.3
2,550,780	+		MPMX19_02431	0.74	+2.3
2,550,780	+		MPMX19_02431	0.74	+0.3
2,550,781	-		MPMX19_02431	0.74	+0.3
2,550,781	-		MPMX19_02431	0.74	+0.1
2,550,781	-		MPMX19_02431	0.74	+0.9
2,550,781	-		MPMX19_02431	0.74	-2.2
2,550,781	-		MPMX19_02431	0.74	-1.1
2,550,781	-		MPMX19_02431	0.74	-1.0
2,550,781	-		MPMX19_02431	0.74	+0.7
2,550,781	-		MPMX19_02431	0.74	-0.2
2,550,781	-		MPMX19_02431	0.74	-0.4
2,550,781	-		MPMX19_02431	0.74	+0.3
2,550,781	-		MPMX19_02431	0.74	-1.1
2,550,781	-		MPMX19_02431	0.74	-1.3
2,550,781	-		MPMX19_02431	0.74	-0.7
2,550,781	-		MPMX19_02431	0.74	-0.3
2,551,011	+		MPMX19_02431	0.86	-1.7
2,551,011	+		MPMX19_02431	0.86	-0.4
2,551,011	+		MPMX19_02431	0.86	-0.1
2,551,011	+		MPMX19_02431	0.86	+0.1
2,551,011	+		MPMX19_02431	0.86	-1.0
2,551,011	+		MPMX19_02431	0.86	-0.2
2,551,011	+		MPMX19_02431	0.86	+0.7
2,551,011	+		MPMX19_02431	0.86	-0.2
2,551,011	+		MPMX19_02431	0.86	-0.8
2,551,011	+		MPMX19_02431	0.86	-0.1
2,551,012	-		MPMX19_02431	0.86	-0.8
2,551,012	-		MPMX19_02431	0.86	-0.7
2,551,012	-		MPMX19_02431	0.86	-0.3
2,551,012	-		MPMX19_02431	0.86	-0.3
2,551,012	-		MPMX19_02431	0.86	-1.6
2,551,012	-		MPMX19_02431	0.86	+0.4
2,551,012	-		MPMX19_02431	0.86	+0.3
2,551,012	-		MPMX19_02431	0.86	-0.3
2,551,155	+				-0.3
2,551,155	+				+0.7
2,551,155	+				-1.7
2,551,317	+				-0.6
2,551,318	-				-0.5
2,551,318	-				+0.4
2,551,318	-				+0.9
2,551,318	-				-1.8
2,551,318	-				-1.9
2,551,360	+				-0.1
2,551,360	+				-0.8
2,551,360	+				-0.8
2,551,361	-				-0.4
2,551,361	-				+0.1
2,551,541	+				+0.3
2,551,541	+				-1.1
2,551,541	+				-1.1
2,551,541	+				-0.5
2,551,541	+				-1.0
2,551,541	+				-0.1
2,551,541	+				-1.1
2,551,541	+				-0.4
2,551,542	-				+0.1
2,551,542	-				+0.4
2,551,542	-				+0.9
2,551,542	-				-1.1
2,551,589	+				+0.7
2,551,589	+				+0.9
2,551,589	+				-0.9
2,551,589	+				-0.6
2,551,589	+				+1.3
2,551,589	+				-0.7
2,551,589	+				-0.1
2,551,589	+				-0.2
2,551,590	-				-0.2
2,551,590	-				+1.7
2,551,590	-				+0.9
2,551,590	-				-1.1
2,551,590	-				-0.3
2,551,590	-				-1.2
2,551,590	-				-1.1
2,551,590	-				+0.4
2,551,590	-				+0.0
2,551,659	+				+0.2
2,551,703	+				-2.7
2,551,703	+				-0.1
2,551,704	-				-0.9
2,551,704	-				-0.3
2,551,704	-				+1.7
2,551,704	-				-0.4
2,552,030	+		MPMX19_02432	0.28	-0.0
2,552,030	+		MPMX19_02432	0.28	-0.3
2,552,030	+		MPMX19_02432	0.28	+0.3
2,552,030	+		MPMX19_02432	0.28	-1.3
2,552,030	+		MPMX19_02432	0.28	-0.2
2,552,030	+		MPMX19_02432	0.28	+0.3
2,552,030	+		MPMX19_02432	0.28	-0.9
2,552,030	+		MPMX19_02432	0.28	+1.7
2,552,030	+		MPMX19_02432	0.28	+0.5
2,552,030	+		MPMX19_02432	0.28	+0.9
2,552,030	+		MPMX19_02432	0.28	-1.3
2,552,030	+		MPMX19_02432	0.28	-0.7
2,552,030	+		MPMX19_02432	0.28	+0.4
2,552,030	+		MPMX19_02432	0.28	+0.8
2,552,031	-		MPMX19_02432	0.29	+1.1
2,552,031	-		MPMX19_02432	0.29	-2.2
2,552,031	-		MPMX19_02432	0.29	-0.9
2,552,031	-		MPMX19_02432	0.29	-0.3
2,552,031	-		MPMX19_02432	0.29	+0.1
2,552,031	-		MPMX19_02432	0.29	-1.3
2,552,123	+		MPMX19_02432	0.34	+0.4
2,552,123	+		MPMX19_02432	0.34	+0.1
2,552,123	+		MPMX19_02432	0.34	-3.3
2,552,123	+		MPMX19_02432	0.34	-0.3
2,552,123	+		MPMX19_02432	0.34	-1.1
2,552,123	+		MPMX19_02432	0.34	-1.9
2,552,124	-		MPMX19_02432	0.34	-1.0
2,552,124	-		MPMX19_02432	0.34	-0.8
2,552,124	-		MPMX19_02432	0.34	-0.3
2,552,124	-		MPMX19_02432	0.34	+0.3
2,552,124	-		MPMX19_02432	0.34	-1.3
2,552,124	-		MPMX19_02432	0.34	-1.1
2,552,124	-		MPMX19_02432	0.34	+1.1
2,552,124	-		MPMX19_02432	0.34	+1.1
2,552,124	-		MPMX19_02432	0.34	+0.6
2,552,124	-		MPMX19_02432	0.34	-0.3
2,552,124	-		MPMX19_02432	0.34	+0.3
2,552,241	-		MPMX19_02432	0.41	-0.9