Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02509

Experiment: NL-CCM; high oxygen

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02508 and MPMX19_02509 are separated by 406 nucleotidesMPMX19_02509 and MPMX19_02510 are separated by 487 nucleotides MPMX19_02508: MPMX19_02508 - GTP cyclohydrolase 1, at 2,625,388 to 2,626,062 _02508 MPMX19_02509: MPMX19_02509 - Protein ApaG, at 2,626,469 to 2,626,861 _02509 MPMX19_02510: MPMX19_02510 - hypothetical protein, at 2,627,349 to 2,628,053 _02510 Position (kb) 2626 2627Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2626.087 kb on - strandat 2626.087 kb on - strandat 2626.087 kb on - strandat 2626.087 kb on - strandat 2626.177 kb on - strandat 2626.177 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.236 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.308 kb on - strandat 2626.312 kb on - strandat 2626.312 kb on - strandat 2626.312 kb on - strandat 2626.312 kb on - strandat 2626.312 kb on - strandat 2626.312 kb on - strandat 2626.312 kb on - strandat 2626.313 kb on - strandat 2626.324 kb on - strandat 2626.324 kb on - strandat 2626.324 kb on - strandat 2626.324 kb on - strandat 2626.324 kb on - strandat 2626.324 kb on - strandat 2626.324 kb on - strandat 2626.324 kb on - strandat 2626.349 kb on - strandat 2626.349 kb on - strandat 2626.349 kb on - strandat 2626.349 kb on - strandat 2626.349 kb on - strandat 2626.411 kb on + strandat 2626.412 kb on - strandat 2626.416 kb on + strandat 2626.560 kb on + strand, within MPMX19_02509at 2626.560 kb on + strand, within MPMX19_02509at 2626.560 kb on + strand, within MPMX19_02509at 2626.560 kb on + strand, within MPMX19_02509at 2626.560 kb on + strand, within MPMX19_02509at 2626.560 kb on + strand, within MPMX19_02509at 2626.560 kb on + strand, within MPMX19_02509at 2626.560 kb on + strand, within MPMX19_02509at 2626.560 kb on + strand, within MPMX19_02509at 2626.560 kb on + strand, within MPMX19_02509at 2626.560 kb on + strand, within MPMX19_02509at 2626.561 kb on - strand, within MPMX19_02509at 2626.561 kb on - strand, within MPMX19_02509at 2626.561 kb on - strand, within MPMX19_02509at 2626.561 kb on - strand, within MPMX19_02509at 2626.561 kb on - strand, within MPMX19_02509at 2626.611 kb on + strand, within MPMX19_02509at 2626.611 kb on + strand, within MPMX19_02509at 2626.611 kb on + strand, within MPMX19_02509at 2626.611 kb on + strand, within MPMX19_02509at 2626.611 kb on + strand, within MPMX19_02509at 2626.611 kb on + strand, within MPMX19_02509at 2626.611 kb on + strand, within MPMX19_02509at 2626.611 kb on + strand, within MPMX19_02509at 2626.611 kb on + strand, within MPMX19_02509at 2626.612 kb on - strand, within MPMX19_02509at 2626.612 kb on - strand, within MPMX19_02509at 2626.612 kb on - strand, within MPMX19_02509at 2626.612 kb on - strand, within MPMX19_02509at 2626.612 kb on - strand, within MPMX19_02509at 2626.612 kb on - strand, within MPMX19_02509at 2626.612 kb on - strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.764 kb on + strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.765 kb on - strand, within MPMX19_02509at 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.857 kb on + strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.858 kb on - strandat 2626.916 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.989 kb on + strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2626.990 kb on - strandat 2627.056 kb on + strandat 2627.058 kb on + strandat 2627.058 kb on + strandat 2627.058 kb on + strandat 2627.058 kb on + strandat 2627.058 kb on + strandat 2627.059 kb on - strandat 2627.059 kb on - strandat 2627.059 kb on - strandat 2627.059 kb on - strandat 2627.059 kb on - strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.115 kb on + strandat 2627.116 kb on - strandat 2627.116 kb on - strandat 2627.116 kb on - strandat 2627.116 kb on - strandat 2627.116 kb on - strandat 2627.116 kb on - strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.117 kb on + strandat 2627.118 kb on - strandat 2627.118 kb on - strandat 2627.118 kb on - strandat 2627.118 kb on - strandat 2627.118 kb on - strandat 2627.118 kb on - strandat 2627.118 kb on - strandat 2627.118 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM; high oxygen
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2,626,087 - +0.0
2,626,087 - +0.1
2,626,087 - -2.1
2,626,087 - +0.7
2,626,177 - -0.7
2,626,177 - +0.1
2,626,236 - -0.1
2,626,236 - -0.8
2,626,236 - +0.5
2,626,236 - -0.1
2,626,236 - +1.1
2,626,236 - -0.6
2,626,236 - +0.0
2,626,236 - -0.0
2,626,236 - +0.1
2,626,236 - +1.1
2,626,236 - +0.3
2,626,236 - -1.0
2,626,236 - -0.3
2,626,236 - -2.4
2,626,236 - -0.4
2,626,236 - +0.2
2,626,236 - -1.0
2,626,236 - -0.4
2,626,308 - -0.6
2,626,308 - +0.4
2,626,308 - -1.5
2,626,308 - -0.1
2,626,308 - +0.2
2,626,308 - +1.7
2,626,308 - -2.0
2,626,308 - -0.9
2,626,308 - +0.3
2,626,308 - -1.2
2,626,308 - +1.6
2,626,308 - +0.2
2,626,308 - -0.6
2,626,312 - -0.6
2,626,312 - -1.9
2,626,312 - +0.1
2,626,312 - -2.0
2,626,312 - +0.9
2,626,312 - -2.5
2,626,312 - -0.9
2,626,313 - +0.7
2,626,324 - -0.3
2,626,324 - +0.7
2,626,324 - -0.3
2,626,324 - -0.3
2,626,324 - -0.4
2,626,324 - -0.4
2,626,324 - -2.2
2,626,324 - -0.8
2,626,349 - -1.1
2,626,349 - -0.4
2,626,349 - +2.3
2,626,349 - -0.9
2,626,349 - -1.0
2,626,411 + +0.3
2,626,412 - -0.3
2,626,416 + -0.1
2,626,560 + MPMX19_02509 0.23 +0.8
2,626,560 + MPMX19_02509 0.23 +0.3
2,626,560 + MPMX19_02509 0.23 -0.3
2,626,560 + MPMX19_02509 0.23 -0.3
2,626,560 + MPMX19_02509 0.23 +1.2
2,626,560 + MPMX19_02509 0.23 -2.2
2,626,560 + MPMX19_02509 0.23 -0.1
2,626,560 + MPMX19_02509 0.23 +0.0
2,626,560 + MPMX19_02509 0.23 -2.0
2,626,560 + MPMX19_02509 0.23 +0.3
2,626,560 + MPMX19_02509 0.23 +0.8
2,626,561 - MPMX19_02509 0.23 -0.2
2,626,561 - MPMX19_02509 0.23 -0.5
2,626,561 - MPMX19_02509 0.23 +0.7
2,626,561 - MPMX19_02509 0.23 +0.4
2,626,561 - MPMX19_02509 0.23 +0.4
2,626,611 + MPMX19_02509 0.36 +0.5
2,626,611 + MPMX19_02509 0.36 -0.8
2,626,611 + MPMX19_02509 0.36 -0.7
2,626,611 + MPMX19_02509 0.36 +1.1
2,626,611 + MPMX19_02509 0.36 -0.8
2,626,611 + MPMX19_02509 0.36 +0.0
2,626,611 + MPMX19_02509 0.36 -0.8
2,626,611 + MPMX19_02509 0.36 -0.4
2,626,611 + MPMX19_02509 0.36 -1.1
2,626,612 - MPMX19_02509 0.36 +0.3
2,626,612 - MPMX19_02509 0.36 +1.5
2,626,612 - MPMX19_02509 0.36 -0.6
2,626,612 - MPMX19_02509 0.36 -0.4
2,626,612 - MPMX19_02509 0.36 -0.4
2,626,612 - MPMX19_02509 0.36 +1.1
2,626,612 - MPMX19_02509 0.36 +0.9
2,626,764 + MPMX19_02509 0.75 -0.1
2,626,764 + MPMX19_02509 0.75 +0.6
2,626,764 + MPMX19_02509 0.75 +2.3
2,626,764 + MPMX19_02509 0.75 -0.4
2,626,764 + MPMX19_02509 0.75 +0.5
2,626,764 + MPMX19_02509 0.75 -0.5
2,626,764 + MPMX19_02509 0.75 +0.5
2,626,764 + MPMX19_02509 0.75 -0.6
2,626,764 + MPMX19_02509 0.75 -0.5
2,626,764 + MPMX19_02509 0.75 +0.4
2,626,764 + MPMX19_02509 0.75 +1.4
2,626,764 + MPMX19_02509 0.75 -0.3
2,626,764 + MPMX19_02509 0.75 +0.3
2,626,764 + MPMX19_02509 0.75 -1.1
2,626,764 + MPMX19_02509 0.75 +0.5
2,626,764 + MPMX19_02509 0.75 -1.0
2,626,764 + MPMX19_02509 0.75 +1.7
2,626,764 + MPMX19_02509 0.75 +0.0
2,626,764 + MPMX19_02509 0.75 +0.3
2,626,764 + MPMX19_02509 0.75 +1.0
2,626,764 + MPMX19_02509 0.75 -0.3
2,626,764 + MPMX19_02509 0.75 -0.4
2,626,764 + MPMX19_02509 0.75 +1.3
2,626,764 + MPMX19_02509 0.75 +1.3
2,626,764 + MPMX19_02509 0.75 -1.1
2,626,764 + MPMX19_02509 0.75 -0.1
2,626,765 - MPMX19_02509 0.75 -1.9
2,626,765 - MPMX19_02509 0.75 +0.1
2,626,765 - MPMX19_02509 0.75 +0.1
2,626,765 - MPMX19_02509 0.75 -1.1
2,626,765 - MPMX19_02509 0.75 -2.3
2,626,765 - MPMX19_02509 0.75 +0.7
2,626,765 - MPMX19_02509 0.75 +1.3
2,626,765 - MPMX19_02509 0.75 -1.4
2,626,765 - MPMX19_02509 0.75 -0.1
2,626,765 - MPMX19_02509 0.75 +0.1
2,626,765 - MPMX19_02509 0.75 -0.8
2,626,765 - MPMX19_02509 0.75 +1.0
2,626,765 - MPMX19_02509 0.75 +2.0
2,626,765 - MPMX19_02509 0.75 +1.0
2,626,765 - MPMX19_02509 0.75 -0.7
2,626,765 - MPMX19_02509 0.75 -0.1
2,626,765 - MPMX19_02509 0.75 -1.6
2,626,765 - MPMX19_02509 0.75 -2.8
2,626,765 - MPMX19_02509 0.75 -0.4
2,626,765 - MPMX19_02509 0.75 +0.6
2,626,765 - MPMX19_02509 0.75 +0.2
2,626,765 - MPMX19_02509 0.75 -0.9
2,626,765 - MPMX19_02509 0.75 -0.9
2,626,765 - MPMX19_02509 0.75 +0.2
2,626,765 - MPMX19_02509 0.75 -0.6
2,626,857 + +0.6
2,626,857 + -0.8
2,626,857 + +0.0
2,626,857 + -2.1
2,626,857 + +0.0
2,626,857 + +0.8
2,626,857 + -0.1
2,626,857 + +0.2
2,626,857 + +0.6
2,626,857 + +0.0
2,626,857 + -1.5
2,626,857 + -1.3
2,626,857 + -0.6
2,626,857 + +0.2
2,626,857 + -0.1
2,626,857 + +1.4
2,626,857 + +0.6
2,626,857 + -0.2
2,626,857 + +0.6
2,626,857 + -0.6
2,626,857 + +0.4
2,626,858 - +0.5
2,626,858 - -1.5
2,626,858 - +0.2
2,626,858 - +1.1
2,626,858 - +0.3
2,626,858 - -0.3
2,626,858 - +0.0
2,626,858 - -1.3
2,626,858 - -1.3
2,626,858 - +1.5
2,626,858 - +0.1
2,626,858 - -1.9
2,626,858 - -1.3
2,626,858 - -0.6
2,626,858 - +1.1
2,626,858 - -0.1
2,626,858 - -0.9
2,626,858 - -0.6
2,626,858 - +0.7
2,626,858 - -1.1
2,626,858 - -0.6
2,626,858 - -0.3
2,626,858 - +0.1
2,626,858 - +0.4
2,626,858 - -1.3
2,626,858 - -0.4
2,626,858 - -0.7
2,626,858 - +0.5
2,626,858 - -0.2
2,626,916 + -0.6
2,626,989 + +0.7
2,626,989 + -0.9
2,626,989 + +0.9
2,626,989 + +1.1
2,626,989 + -0.7
2,626,989 + +1.9
2,626,989 + -0.6
2,626,989 + +0.6
2,626,989 + -0.8
2,626,989 + -0.9
2,626,989 + -0.1
2,626,989 + -1.5
2,626,989 + -1.3
2,626,989 + -0.5
2,626,990 - -0.1
2,626,990 - -0.0
2,626,990 - -0.4
2,626,990 - -0.5
2,626,990 - -1.0
2,626,990 - +1.1
2,626,990 - -0.1
2,626,990 - -0.2
2,626,990 - +0.1
2,626,990 - -0.4
2,626,990 - +0.4
2,626,990 - -1.0
2,626,990 - +0.4
2,626,990 - +0.1
2,626,990 - +0.6
2,627,056 + +0.3
2,627,058 + -0.8
2,627,058 + -0.3
2,627,058 + +0.3
2,627,058 + +0.5
2,627,058 + -0.0
2,627,059 - +0.1
2,627,059 - -0.4
2,627,059 - -0.8
2,627,059 - +0.1
2,627,059 - -1.6
2,627,115 + +0.3
2,627,115 + +1.7
2,627,115 + +0.0
2,627,115 + -0.9
2,627,115 + +0.1
2,627,115 + +0.2
2,627,115 + +0.1
2,627,115 + +0.1
2,627,115 + -0.8
2,627,115 + +0.3
2,627,115 + -0.3
2,627,115 + -0.4
2,627,115 + -0.9
2,627,115 + -2.2
2,627,115 + -1.8
2,627,116 - +0.7
2,627,116 - -0.3
2,627,116 - -1.1
2,627,116 - -0.3
2,627,116 - -0.6
2,627,116 - -0.9
2,627,117 + +0.5
2,627,117 + +0.4
2,627,117 + -0.5
2,627,117 + -1.4
2,627,117 + +0.7
2,627,117 + +1.0
2,627,117 + -0.1
2,627,117 + -0.1
2,627,117 + +0.1
2,627,117 + -0.9
2,627,117 + -2.1
2,627,117 + -0.1
2,627,117 + +0.1
2,627,117 + -0.9
2,627,117 + -1.0
2,627,117 + -1.5
2,627,117 + -0.2
2,627,117 + -0.5
2,627,117 + -1.1
2,627,117 + -0.1
2,627,117 + +0.2
2,627,117 + +0.3
2,627,117 + -0.4
2,627,117 + -1.9
2,627,117 + +0.7
2,627,117 + +0.1
2,627,117 + -0.0
2,627,117 + -1.3
2,627,117 + -1.5
2,627,118 - -0.9
2,627,118 - -1.6
2,627,118 - -0.6
2,627,118 - -0.3
2,627,118 - -1.5
2,627,118 - -0.6
2,627,118 - +0.9
2,627,118 - -0.9

Or see this region's nucleotide sequence