Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02508 and MPMX19_02509 are separated by 406 nucleotides MPMX19_02509 and MPMX19_02510 are separated by 487 nucleotides
MPMX19_02508: MPMX19_02508 - GTP cyclohydrolase 1, at 2,625,388 to 2,626,062
_02508
MPMX19_02509: MPMX19_02509 - Protein ApaG, at 2,626,469 to 2,626,861
_02509
MPMX19_02510: MPMX19_02510 - hypothetical protein, at 2,627,349 to 2,628,053
_02510
Position (kb)
2626
2627 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2626.087 kb on - strand at 2626.087 kb on - strand at 2626.087 kb on - strand at 2626.087 kb on - strand at 2626.177 kb on - strand at 2626.177 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.313 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.411 kb on + strand at 2626.412 kb on - strand at 2626.416 kb on + strand at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.916 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2627.056 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 2,626,087 - +0.0 2,626,087 - +0.1 2,626,087 - -2.1 2,626,087 - +0.7 2,626,177 - -0.7 2,626,177 - +0.1 2,626,236 - -0.1 2,626,236 - -0.8 2,626,236 - +0.5 2,626,236 - -0.1 2,626,236 - +1.1 2,626,236 - -0.6 2,626,236 - +0.0 2,626,236 - -0.0 2,626,236 - +0.1 2,626,236 - +1.1 2,626,236 - +0.3 2,626,236 - -1.0 2,626,236 - -0.3 2,626,236 - -2.4 2,626,236 - -0.4 2,626,236 - +0.2 2,626,236 - -1.0 2,626,236 - -0.4 2,626,308 - -0.6 2,626,308 - +0.4 2,626,308 - -1.5 2,626,308 - -0.1 2,626,308 - +0.2 2,626,308 - +1.7 2,626,308 - -2.0 2,626,308 - -0.9 2,626,308 - +0.3 2,626,308 - -1.2 2,626,308 - +1.6 2,626,308 - +0.2 2,626,308 - -0.6 2,626,312 - -0.6 2,626,312 - -1.9 2,626,312 - +0.1 2,626,312 - -2.0 2,626,312 - +0.9 2,626,312 - -2.5 2,626,312 - -0.9 2,626,313 - +0.7 2,626,324 - -0.3 2,626,324 - +0.7 2,626,324 - -0.3 2,626,324 - -0.3 2,626,324 - -0.4 2,626,324 - -0.4 2,626,324 - -2.2 2,626,324 - -0.8 2,626,349 - -1.1 2,626,349 - -0.4 2,626,349 - +2.3 2,626,349 - -0.9 2,626,349 - -1.0 2,626,411 + +0.3 2,626,412 - -0.3 2,626,416 + -0.1 2,626,560 + MPMX19_02509 0.23 +0.8 2,626,560 + MPMX19_02509 0.23 +0.3 2,626,560 + MPMX19_02509 0.23 -0.3 2,626,560 + MPMX19_02509 0.23 -0.3 2,626,560 + MPMX19_02509 0.23 +1.2 2,626,560 + MPMX19_02509 0.23 -2.2 2,626,560 + MPMX19_02509 0.23 -0.1 2,626,560 + MPMX19_02509 0.23 +0.0 2,626,560 + MPMX19_02509 0.23 -2.0 2,626,560 + MPMX19_02509 0.23 +0.3 2,626,560 + MPMX19_02509 0.23 +0.8 2,626,561 - MPMX19_02509 0.23 -0.2 2,626,561 - MPMX19_02509 0.23 -0.5 2,626,561 - MPMX19_02509 0.23 +0.7 2,626,561 - MPMX19_02509 0.23 +0.4 2,626,561 - MPMX19_02509 0.23 +0.4 2,626,611 + MPMX19_02509 0.36 +0.5 2,626,611 + MPMX19_02509 0.36 -0.8 2,626,611 + MPMX19_02509 0.36 -0.7 2,626,611 + MPMX19_02509 0.36 +1.1 2,626,611 + MPMX19_02509 0.36 -0.8 2,626,611 + MPMX19_02509 0.36 +0.0 2,626,611 + MPMX19_02509 0.36 -0.8 2,626,611 + MPMX19_02509 0.36 -0.4 2,626,611 + MPMX19_02509 0.36 -1.1 2,626,612 - MPMX19_02509 0.36 +0.3 2,626,612 - MPMX19_02509 0.36 +1.5 2,626,612 - MPMX19_02509 0.36 -0.6 2,626,612 - MPMX19_02509 0.36 -0.4 2,626,612 - MPMX19_02509 0.36 -0.4 2,626,612 - MPMX19_02509 0.36 +1.1 2,626,612 - MPMX19_02509 0.36 +0.9 2,626,764 + MPMX19_02509 0.75 -0.1 2,626,764 + MPMX19_02509 0.75 +0.6 2,626,764 + MPMX19_02509 0.75 +2.3 2,626,764 + MPMX19_02509 0.75 -0.4 2,626,764 + MPMX19_02509 0.75 +0.5 2,626,764 + MPMX19_02509 0.75 -0.5 2,626,764 + MPMX19_02509 0.75 +0.5 2,626,764 + MPMX19_02509 0.75 -0.6 2,626,764 + MPMX19_02509 0.75 -0.5 2,626,764 + MPMX19_02509 0.75 +0.4 2,626,764 + MPMX19_02509 0.75 +1.4 2,626,764 + MPMX19_02509 0.75 -0.3 2,626,764 + MPMX19_02509 0.75 +0.3 2,626,764 + MPMX19_02509 0.75 -1.1 2,626,764 + MPMX19_02509 0.75 +0.5 2,626,764 + MPMX19_02509 0.75 -1.0 2,626,764 + MPMX19_02509 0.75 +1.7 2,626,764 + MPMX19_02509 0.75 +0.0 2,626,764 + MPMX19_02509 0.75 +0.3 2,626,764 + MPMX19_02509 0.75 +1.0 2,626,764 + MPMX19_02509 0.75 -0.3 2,626,764 + MPMX19_02509 0.75 -0.4 2,626,764 + MPMX19_02509 0.75 +1.3 2,626,764 + MPMX19_02509 0.75 +1.3 2,626,764 + MPMX19_02509 0.75 -1.1 2,626,764 + MPMX19_02509 0.75 -0.1 2,626,765 - MPMX19_02509 0.75 -1.9 2,626,765 - MPMX19_02509 0.75 +0.1 2,626,765 - MPMX19_02509 0.75 +0.1 2,626,765 - MPMX19_02509 0.75 -1.1 2,626,765 - MPMX19_02509 0.75 -2.3 2,626,765 - MPMX19_02509 0.75 +0.7 2,626,765 - MPMX19_02509 0.75 +1.3 2,626,765 - MPMX19_02509 0.75 -1.4 2,626,765 - MPMX19_02509 0.75 -0.1 2,626,765 - MPMX19_02509 0.75 +0.1 2,626,765 - MPMX19_02509 0.75 -0.8 2,626,765 - MPMX19_02509 0.75 +1.0 2,626,765 - MPMX19_02509 0.75 +2.0 2,626,765 - MPMX19_02509 0.75 +1.0 2,626,765 - MPMX19_02509 0.75 -0.7 2,626,765 - MPMX19_02509 0.75 -0.1 2,626,765 - MPMX19_02509 0.75 -1.6 2,626,765 - MPMX19_02509 0.75 -2.8 2,626,765 - MPMX19_02509 0.75 -0.4 2,626,765 - MPMX19_02509 0.75 +0.6 2,626,765 - MPMX19_02509 0.75 +0.2 2,626,765 - MPMX19_02509 0.75 -0.9 2,626,765 - MPMX19_02509 0.75 -0.9 2,626,765 - MPMX19_02509 0.75 +0.2 2,626,765 - MPMX19_02509 0.75 -0.6 2,626,857 + +0.6 2,626,857 + -0.8 2,626,857 + +0.0 2,626,857 + -2.1 2,626,857 + +0.0 2,626,857 + +0.8 2,626,857 + -0.1 2,626,857 + +0.2 2,626,857 + +0.6 2,626,857 + +0.0 2,626,857 + -1.5 2,626,857 + -1.3 2,626,857 + -0.6 2,626,857 + +0.2 2,626,857 + -0.1 2,626,857 + +1.4 2,626,857 + +0.6 2,626,857 + -0.2 2,626,857 + +0.6 2,626,857 + -0.6 2,626,857 + +0.4 2,626,858 - +0.5 2,626,858 - -1.5 2,626,858 - +0.2 2,626,858 - +1.1 2,626,858 - +0.3 2,626,858 - -0.3 2,626,858 - +0.0 2,626,858 - -1.3 2,626,858 - -1.3 2,626,858 - +1.5 2,626,858 - +0.1 2,626,858 - -1.9 2,626,858 - -1.3 2,626,858 - -0.6 2,626,858 - +1.1 2,626,858 - -0.1 2,626,858 - -0.9 2,626,858 - -0.6 2,626,858 - +0.7 2,626,858 - -1.1 2,626,858 - -0.6 2,626,858 - -0.3 2,626,858 - +0.1 2,626,858 - +0.4 2,626,858 - -1.3 2,626,858 - -0.4 2,626,858 - -0.7 2,626,858 - +0.5 2,626,858 - -0.2 2,626,916 + -0.6 2,626,989 + +0.7 2,626,989 + -0.9 2,626,989 + +0.9 2,626,989 + +1.1 2,626,989 + -0.7 2,626,989 + +1.9 2,626,989 + -0.6 2,626,989 + +0.6 2,626,989 + -0.8 2,626,989 + -0.9 2,626,989 + -0.1 2,626,989 + -1.5 2,626,989 + -1.3 2,626,989 + -0.5 2,626,990 - -0.1 2,626,990 - -0.0 2,626,990 - -0.4 2,626,990 - -0.5 2,626,990 - -1.0 2,626,990 - +1.1 2,626,990 - -0.1 2,626,990 - -0.2 2,626,990 - +0.1 2,626,990 - -0.4 2,626,990 - +0.4 2,626,990 - -1.0 2,626,990 - +0.4 2,626,990 - +0.1 2,626,990 - +0.6 2,627,056 + +0.3 2,627,058 + -0.8 2,627,058 + -0.3 2,627,058 + +0.3 2,627,058 + +0.5 2,627,058 + -0.0 2,627,059 - +0.1 2,627,059 - -0.4 2,627,059 - -0.8 2,627,059 - +0.1 2,627,059 - -1.6 2,627,115 + +0.3 2,627,115 + +1.7 2,627,115 + +0.0 2,627,115 + -0.9 2,627,115 + +0.1 2,627,115 + +0.2 2,627,115 + +0.1 2,627,115 + +0.1 2,627,115 + -0.8 2,627,115 + +0.3 2,627,115 + -0.3 2,627,115 + -0.4 2,627,115 + -0.9 2,627,115 + -2.2 2,627,115 + -1.8 2,627,116 - +0.7 2,627,116 - -0.3 2,627,116 - -1.1 2,627,116 - -0.3 2,627,116 - -0.6 2,627,116 - -0.9 2,627,117 + +0.5 2,627,117 + +0.4 2,627,117 + -0.5 2,627,117 + -1.4 2,627,117 + +0.7 2,627,117 + +1.0 2,627,117 + -0.1 2,627,117 + -0.1 2,627,117 + +0.1 2,627,117 + -0.9 2,627,117 + -2.1 2,627,117 + -0.1 2,627,117 + +0.1 2,627,117 + -0.9 2,627,117 + -1.0 2,627,117 + -1.5 2,627,117 + -0.2 2,627,117 + -0.5 2,627,117 + -1.1 2,627,117 + -0.1 2,627,117 + +0.2 2,627,117 + +0.3 2,627,117 + -0.4 2,627,117 + -1.9 2,627,117 + +0.7 2,627,117 + +0.1 2,627,117 + -0.0 2,627,117 + -1.3 2,627,117 + -1.5 2,627,118 - -0.9 2,627,118 - -1.6 2,627,118 - -0.6 2,627,118 - -0.3 2,627,118 - -1.5 2,627,118 - -0.6 2,627,118 - +0.9 2,627,118 - -0.9
Or see this region's nucleotide sequence