Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS09075

Experiment: MHII_biocarbonate_serum_Chelated; 35C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MHII_biocarbonate_serum_Chelated; 35C
1,877,373	+		RR41_RS09065	0.87	+0.0
1,877,374	-		RR41_RS09065	0.87	+0.8
1,877,379	-		RR41_RS09065	0.88	+1.6
1,877,379	-		RR41_RS09065	0.88	-1.2
1,877,445	-				-1.3
1,877,466	+				-0.8
1,877,503	+				-0.4
1,877,514	-				-1.5
1,877,534	+				+0.0
1,877,535	-				-1.0
1,877,589	-				+0.5
1,877,610	+				-1.4
1,877,611	-				+1.2
1,877,650	+		RR41_RS09070	0.13	-2.5
1,877,651	-		RR41_RS09070	0.13	+2.6
1,877,656	-		RR41_RS09070	0.14	+2.0
1,877,659	+		RR41_RS09070	0.15	-1.0
1,877,680	-		RR41_RS09070	0.19	+3.6
1,877,769	+		RR41_RS09070	0.38	+2.1
1,877,769	+		RR41_RS09070	0.38	-0.4
1,877,769	+		RR41_RS09070	0.38	+0.4
1,877,770	-		RR41_RS09070	0.38	+0.5
1,877,859	+		RR41_RS09070	0.57	+0.0
1,877,860	-		RR41_RS09070	0.57	+0.2
1,877,860	-		RR41_RS09070	0.57	-1.2
1,877,876	-		RR41_RS09070	0.60	-0.3
1,877,876	-		RR41_RS09070	0.60	+1.6
1,877,881	-		RR41_RS09070	0.61	+0.8
1,877,934	+		RR41_RS09070	0.72	-1.2
1,878,000	-		RR41_RS09070	0.86	-1.5
1,878,015	+		RR41_RS09070	0.89	-1.0
1,878,015	+		RR41_RS09070	0.89	-0.4
1,878,016	-		RR41_RS09070	0.89	-1.8
1,878,074	-				-2.1
1,878,101	-				-0.2
1,878,101	-				-1.0
1,878,210	+				-2.1
1,878,211	-				-1.4
1,878,211	-				+0.6
1,878,240	+				+1.2
1,878,240	+				-0.4
1,878,240	+				-1.4
1,878,241	-				-1.5
1,878,241	-				+0.6
1,878,241	-				-1.2
1,878,241	-				-0.0
1,878,259	+				-1.4
1,878,268	+				-0.4
1,878,269	-				+0.6
1,878,272	+				-1.2
1,878,273	-				-1.2
1,878,278	+				+0.6
1,878,278	+				-0.5
1,878,279	-				+1.4
1,878,285	+				-1.5
1,878,286	-				+0.2
1,878,288	+				-2.4
1,878,288	+				-1.5
1,878,289	-				-1.5
1,878,289	-				-0.4
1,878,364	+				+0.5
1,878,365	-				-1.0
1,878,365	-				-1.7
1,878,370	-				+0.7
1,878,418	+				-0.2
1,878,419	-				+0.6
1,878,422	+				-0.4
1,878,444	-				-1.4
1,878,449	+				-2.6
1,878,538	+				-0.6
1,878,630	-		RR41_RS09075	0.11	-2.7
1,878,630	-		RR41_RS09075	0.11	-0.3
1,878,630	-		RR41_RS09075	0.11	-2.2
1,878,630	-		RR41_RS09075	0.11	-0.1
1,878,656	-		RR41_RS09075	0.12	+0.6
1,878,680	-		RR41_RS09075	0.13	-2.5
1,878,689	+		RR41_RS09075	0.13	+0.0
1,878,690	-		RR41_RS09075	0.13	-2.4
1,878,690	-		RR41_RS09075	0.13	-3.3
1,878,752	+		RR41_RS09075	0.16	-0.7
1,878,752	+		RR41_RS09075	0.16	-2.1
1,878,764	+		RR41_RS09075	0.16	-0.3
1,878,764	+		RR41_RS09075	0.16	-0.4
1,878,765	-		RR41_RS09075	0.16	-0.3
1,878,765	-		RR41_RS09075	0.16	-2.0
1,878,765	-		RR41_RS09075	0.16	-0.5
1,878,765	-		RR41_RS09075	0.16	-1.2
1,878,765	-		RR41_RS09075	0.16	-1.0
1,878,765	-		RR41_RS09075	0.16	-2.9
1,878,821	+		RR41_RS09075	0.19	+0.5
1,878,821	+		RR41_RS09075	0.19	-0.4
1,878,821	+		RR41_RS09075	0.19	-1.5
1,878,822	-		RR41_RS09075	0.19	-0.2
1,878,824	+		RR41_RS09075	0.19	-2.4
1,878,825	-		RR41_RS09075	0.19	-0.8
1,878,841	+		RR41_RS09075	0.19	+0.4
1,878,858	-		RR41_RS09075	0.20	+0.0
1,878,880	+		RR41_RS09075	0.21	-2.1
1,878,889	+		RR41_RS09075	0.21	-2.1
1,878,895	+		RR41_RS09075	0.22	+0.3
1,878,896	-		RR41_RS09075	0.22	+0.1
1,878,919	+		RR41_RS09075	0.23	-2.4
1,878,919	+		RR41_RS09075	0.23	+0.9
1,878,919	+		RR41_RS09075	0.23	+0.0
1,878,920	-		RR41_RS09075	0.23	-0.4
1,878,920	-		RR41_RS09075	0.23	-2.0
1,878,923	-		RR41_RS09075	0.23	-2.2
1,878,938	+		RR41_RS09075	0.23	+2.4
1,878,939	-		RR41_RS09075	0.23	-1.4
1,878,939	-		RR41_RS09075	0.23	-1.2
1,878,939	-		RR41_RS09075	0.23	-2.8
1,878,962	+		RR41_RS09075	0.24	-2.7
1,878,962	+		RR41_RS09075	0.24	-1.6
1,878,972	-		RR41_RS09075	0.25	-0.5
1,878,972	-		RR41_RS09075	0.25	-0.2
1,879,019	+		RR41_RS09075	0.27	-1.0
1,879,019	+		RR41_RS09075	0.27	-1.3
1,879,020	-		RR41_RS09075	0.27	+0.0
1,879,020	-		RR41_RS09075	0.27	-1.5
1,879,020	-		RR41_RS09075	0.27	-1.5
1,879,023	+		RR41_RS09075	0.27	-1.2
1,879,023	+		RR41_RS09075	0.27	+0.0
1,879,099	+		RR41_RS09075	0.30	-1.2
1,879,099	+		RR41_RS09075	0.30	+0.0
1,879,127	+		RR41_RS09075	0.31	-2.0
1,879,132	+		RR41_RS09075	0.31	-0.8
1,879,154	-		RR41_RS09075	0.32	-2.2
1,879,156	-		RR41_RS09075	0.32	-0.4
1,879,192	+		RR41_RS09075	0.34	-2.5
1,879,192	+		RR41_RS09075	0.34	-1.2
1,879,193	-		RR41_RS09075	0.34	-0.8
1,879,226	-		RR41_RS09075	0.35	-1.4
1,879,226	-		RR41_RS09075	0.35	-1.5
1,879,235	-		RR41_RS09075	0.36	-1.0
1,879,245	+		RR41_RS09075	0.36	-1.2
1,879,279	+		RR41_RS09075	0.37	-1.5
1,879,280	-		RR41_RS09075	0.38	+0.6
1,879,331	-		RR41_RS09075	0.40	+0.8
1,879,348	+		RR41_RS09075	0.40	-1.1
1,879,388	+		RR41_RS09075	0.42	-0.8
1,879,392	+		RR41_RS09075	0.42	+1.0
1,879,564	+		RR41_RS09075	0.49	-1.0
1,879,565	-		RR41_RS09075	0.49	+0.3
1,879,565	-		RR41_RS09075	0.49	-1.9
1,879,565	-		RR41_RS09075	0.49	-2.4
1,879,566	+		RR41_RS09075	0.49	+0.5
1,879,566	+		RR41_RS09075	0.49	-1.0
1,879,566	+		RR41_RS09075	0.49	-3.8
1,879,566	+		RR41_RS09075	0.49	-0.5
1,879,566	+		RR41_RS09075	0.49	+0.6
1,879,566	+		RR41_RS09075	0.49	-1.2
1,879,566	+		RR41_RS09075	0.49	-0.4
1,879,567	-		RR41_RS09075	0.49	+0.3
1,879,567	-		RR41_RS09075	0.49	-0.3
1,879,567	-		RR41_RS09075	0.49	-2.5
1,879,567	-		RR41_RS09075	0.49	-2.5
1,879,567	-		RR41_RS09075	0.49	-0.4
1,879,567	-		RR41_RS09075	0.49	-2.5
1,879,567	-		RR41_RS09075	0.49	-1.0
1,879,567	-		RR41_RS09075	0.49	-1.8
1,879,567	-		RR41_RS09075	0.49	-0.8
1,879,567	-		RR41_RS09075	0.49	+0.9
1,879,570	+		RR41_RS09075	0.49	-0.2
1,879,571	-		RR41_RS09075	0.50	-1.8
1,879,571	-		RR41_RS09075	0.50	-1.4
1,879,571	-		RR41_RS09075	0.50	+0.3
1,879,604	+		RR41_RS09075	0.51	-0.2
1,879,604	+		RR41_RS09075	0.51	-0.5
1,879,604	+		RR41_RS09075	0.51	-1.7
1,879,605	-		RR41_RS09075	0.51	-1.6
1,879,605	-		RR41_RS09075	0.51	-1.4
1,879,675	+		RR41_RS09075	0.54	-2.1
1,879,676	-		RR41_RS09075	0.54	-2.3
1,879,745	+		RR41_RS09075	0.57	-1.3
1,879,745	+		RR41_RS09075	0.57	-1.0
1,879,745	+		RR41_RS09075	0.57	-2.8
1,879,746	-		RR41_RS09075	0.57	-1.5
1,879,746	-		RR41_RS09075	0.57	-0.4
1,879,749	+		RR41_RS09075	0.57	-1.6
1,879,749	+		RR41_RS09075	0.57	-1.5
1,879,759	+		RR41_RS09075	0.57	-1.2
1,879,759	+		RR41_RS09075	0.57	-1.0
1,879,760	-		RR41_RS09075	0.57	-1.7
1,879,785	+		RR41_RS09075	0.58	-1.4
1,879,826	-		RR41_RS09075	0.60	-1.3
1,879,828	+		RR41_RS09075	0.60	+0.8
1,879,829	-		RR41_RS09075	0.60	-2.1
1,879,858	+		RR41_RS09075	0.61	-1.4
1,879,859	-		RR41_RS09075	0.61	-1.0
1,879,859	-		RR41_RS09075	0.61	-1.2
1,879,863	-		RR41_RS09075	0.62	-0.2
1,879,863	-		RR41_RS09075	0.62	+1.6
1,879,875	-		RR41_RS09075	0.62	-0.7
1,879,875	-		RR41_RS09075	0.62	-0.8
1,879,878	+		RR41_RS09075	0.62	-1.4
1,879,878	+		RR41_RS09075	0.62	-2.5
1,879,879	-		RR41_RS09075	0.62	+0.3
1,879,879	-		RR41_RS09075	0.62	-0.4
1,879,879	-		RR41_RS09075	0.62	-1.0
1,879,879	-		RR41_RS09075	0.62	-0.3
1,879,879	-		RR41_RS09075	0.62	-0.4
1,879,882	+		RR41_RS09075	0.62	-0.9
1,879,882	+		RR41_RS09075	0.62	-0.7
1,879,882	+		RR41_RS09075	0.62	+0.7
1,879,882	+		RR41_RS09075	0.62	-1.5
1,879,883	-		RR41_RS09075	0.62	-0.3
1,879,883	-		RR41_RS09075	0.62	-0.5
1,879,883	-		RR41_RS09075	0.62	-1.7
1,879,883	-		RR41_RS09075	0.62	-1.1
1,879,883	-		RR41_RS09075	0.62	-1.4
1,879,883	-		RR41_RS09075	0.62	-1.4
1,879,887	-		RR41_RS09075	0.63	-3.1
1,879,903	+		RR41_RS09075	0.63	-1.4
1,879,925	-		RR41_RS09075	0.64	-0.4
1,879,959	-		RR41_RS09075	0.65	-0.4
1,879,970	+		RR41_RS09075	0.66	-2.9
1,880,072	+		RR41_RS09075	0.70	-0.5
1,880,080	-		RR41_RS09075	0.70	-0.4
1,880,111	+		RR41_RS09075	0.72	-1.0
1,880,112	-		RR41_RS09075	0.72	+0.4
1,880,112	-		RR41_RS09075	0.72	-0.9
1,880,112	-		RR41_RS09075	0.72	-1.7
1,880,124	-		RR41_RS09075	0.72	-1.7
1,880,166	+		RR41_RS09075	0.74	-2.0
1,880,167	-		RR41_RS09075	0.74	-2.4
1,880,167	-		RR41_RS09075	0.74	-2.1
1,880,205	+		RR41_RS09075	0.76	-2.2
1,880,206	-		RR41_RS09075	0.76	+0.3
1,880,237	+		RR41_RS09075	0.77	-0.3
1,880,237	+		RR41_RS09075	0.77	-0.3
1,880,276	+		RR41_RS09075	0.79	-2.5
1,880,277	-		RR41_RS09075	0.79	-3.5
1,880,277	-		RR41_RS09075	0.79	-1.2
1,880,320	+		RR41_RS09075	0.80	-0.1
1,880,320	+		RR41_RS09075	0.80	-2.1
1,880,321	-		RR41_RS09075	0.80	-0.5
1,880,340	+		RR41_RS09075	0.81	-1.0
1,880,351	+		RR41_RS09075	0.82	-1.4
1,880,357	-		RR41_RS09075	0.82	-1.0
1,880,357	-		RR41_RS09075	0.82	-0.5
1,880,360	+		RR41_RS09075	0.82	-2.3
1,880,361	-		RR41_RS09075	0.82	-1.8
1,880,361	-		RR41_RS09075	0.82	-1.5
1,880,392	+		RR41_RS09075	0.83	+0.3
1,880,393	-		RR41_RS09075	0.83	-1.2
1,880,396	+		RR41_RS09075	0.83	+1.6
1,880,396	+		RR41_RS09075	0.83	-2.3
1,880,396	+		RR41_RS09075	0.83	-1.8
1,880,396	+		RR41_RS09075	0.83	+0.7
1,880,397	-		RR41_RS09075	0.83	-1.2
1,880,397	-		RR41_RS09075	0.83	-0.5
1,880,417	+		RR41_RS09075	0.84	-1.4
1,880,418	-		RR41_RS09075	0.84	-1.2
1,880,439	+		RR41_RS09075	0.85	-1.6
1,880,439	+		RR41_RS09075	0.85	-0.8
1,880,440	-		RR41_RS09075	0.85	-0.9
1,880,440	-		RR41_RS09075	0.85	-1.1
1,880,443	+		RR41_RS09075	0.85	-3.5
1,880,443	+		RR41_RS09075	0.85	-2.6
1,880,444	-		RR41_RS09075	0.85	-0.4
1,880,444	-		RR41_RS09075	0.85	-1.1
1,880,444	-		RR41_RS09075	0.85	-1.6
1,880,444	-		RR41_RS09075	0.85	-1.0
1,880,471	-		RR41_RS09075	0.87	-1.5
1,880,471	-		RR41_RS09075	0.87	-0.5
1,880,480	+		RR41_RS09075	0.87	-2.9
1,880,480	+		RR41_RS09075	0.87	+1.1
1,880,480	+		RR41_RS09075	0.87	-1.6
1,880,481	-		RR41_RS09075	0.87	-1.8
1,880,481	-		RR41_RS09075	0.87	-3.3
1,880,481	-		RR41_RS09075	0.87	-2.4
1,880,491	+		RR41_RS09075	0.87	-1.2
1,880,491	+		RR41_RS09075	0.87	-1.7
1,880,491	+		RR41_RS09075	0.87	-2.1
1,880,491	+		RR41_RS09075	0.87	-2.5
1,880,492	-		RR41_RS09075	0.87	-1.2
1,880,492	-		RR41_RS09075	0.87	-1.3
1,880,492	-		RR41_RS09075	0.87	+0.0
1,880,495	+		RR41_RS09075	0.88	-2.2
1,880,500	+		RR41_RS09075	0.88	-0.5
1,880,527	+		RR41_RS09075	0.89	-0.4
1,880,528	-		RR41_RS09075	0.89	-1.2
1,880,528	-		RR41_RS09075	0.89	-2.3
1,880,528	-		RR41_RS09075	0.89	-0.7
1,880,531	+		RR41_RS09075	0.89	-1.8
1,880,531	+		RR41_RS09075	0.89	-1.8
1,880,531	+		RR41_RS09075	0.89	-2.1
1,880,531	+		RR41_RS09075	0.89	-0.1
1,880,532	-		RR41_RS09075	0.89	-0.3
1,880,532	-		RR41_RS09075	0.89	-0.8
1,880,532	-		RR41_RS09075	0.89	+0.0
1,880,532	-		RR41_RS09075	0.89	+2.0
1,880,537	+		RR41_RS09075	0.89	-0.7
1,880,537	+		RR41_RS09075	0.89	-1.2
1,880,538	-		RR41_RS09075	0.89	-1.5
1,880,554	+		RR41_RS09075	0.90	-1.4
1,880,559	+				-1.1
1,880,567	+				-1.0
1,880,567	+				-2.3
1,880,593	+				-1.3
1,880,594	-				-0.2
1,880,615	+				-2.0
1,880,616	-				-2.0
1,880,621	+				+1.2
1,880,622	-				-1.4
1,880,685	-				-1.5
1,880,706	+				+0.6
1,880,707	-				-1.7
1,880,724	-				+0.1
1,880,724	-				-2.5
1,880,730	-				-1.2
1,880,739	-				-1.4
1,880,741	+				-1.4
1,880,741	+				-0.5
1,880,741	+				+0.1
1,880,741	+				-1.4
1,880,741	+				-1.7
1,880,741	+				+0.0
1,880,742	-				-1.0
1,880,762	+				-2.0
1,880,782	+				-1.2
1,880,782	+				-1.2
1,880,785	+				-0.9
1,880,840	+				-0.8
1,880,850	+				+0.2
1,880,862	+				+1.5
1,880,878	+				+0.6
1,880,878	+				-2.1
1,880,901	-				+0.0
1,880,943	+				+0.8
1,880,996	-				-2.2
1,881,010	+				-1.9
1,881,038	+				+0.2
1,881,047	+				-1.0
1,881,048	-				+0.6
1,881,061	+				-1.5
1,881,062	-				-1.8
1,881,101	+		RR41_RS19665	0.14	-1.5
1,881,102	-		RR41_RS19665	0.15	+0.6
1,881,104	+		RR41_RS19665	0.17	-1.4
1,881,105	-		RR41_RS19665	0.19	-1.2
1,881,107	+		RR41_RS19665	0.21	+0.6
1,881,113	+		RR41_RS19665	0.28	+1.0
1,881,113	+		RR41_RS19665	0.28	-2.1
1,881,113	+		RR41_RS19665	0.28	+0.0
1,881,113	+		RR41_RS19665	0.28	+0.6
1,881,125	+		RR41_RS19665	0.43	-0.8
1,881,126	-		RR41_RS19665	0.44	+0.2
1,881,126	-		RR41_RS19665	0.44	+1.4
1,881,146	+		RR41_RS19665	0.69	-0.5
1,881,155	+		RR41_RS19665	0.80	+0.8
1,881,155	+		RR41_RS19665	0.80	-1.2
1,881,156	-		RR41_RS19665	0.81	-0.3
1,881,158	+		RR41_RS19665	0.84	-2.6
1,881,160	+		RR41_RS19665	0.86	-0.4
1,881,161	-		RR41_RS19665	0.88	-0.4
1,881,161	-		RR41_RS19665	0.88	+2.0
1,881,191	+				-2.0
1,881,192	-				-2.3
1,881,202	-				-0.4
1,881,211	-				-1.2
1,881,241	+				-0.4
1,881,250	-				-0.4
1,881,251	+				+0.9
1,881,251	+				-1.0
1,881,252	-				-0.7