Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF907 and GFF908 are separated by 619 nucleotides GFF908 and GFF909 are separated by 189 nucleotides
GFF907 - Aliphatic amidase expression-regulating protein, at 976,972 to 978,282
GFF907
GFF908 - Carbonic anhydrase 1, at 978,902 to 979,513
GFF908
GFF909 - Magnesium transporter MgtE, at 979,703 to 981,043
GFF909
Position (kb) 978
979
980 Strain fitness (log2 ratio) -2
-1
0
1 at 978.099 kb on + strand, within GFF907 at 978.099 kb on + strand, within GFF907 at 978.100 kb on - strand, within GFF907 at 978.100 kb on - strand, within GFF907 at 978.100 kb on - strand, within GFF907 at 978.100 kb on - strand, within GFF907 at 978.100 kb on - strand, within GFF907 at 978.387 kb on - strand at 978.526 kb on + strand at 978.527 kb on - strand at 978.527 kb on - strand at 978.528 kb on + strand at 978.529 kb on - strand at 978.531 kb on - strand at 978.709 kb on + strand at 979.544 kb on + strand at 979.545 kb on - strand at 979.602 kb on + strand at 979.606 kb on - strand at 979.702 kb on + strand at 979.702 kb on + strand at 979.703 kb on - strand at 979.703 kb on - strand at 979.810 kb on + strand at 979.810 kb on + strand at 979.810 kb on + strand at 979.811 kb on - strand at 979.811 kb on - strand at 979.811 kb on - strand at 979.944 kb on + strand, within GFF909 at 979.944 kb on + strand, within GFF909 at 979.944 kb on + strand, within GFF909 at 979.944 kb on + strand, within GFF909 at 979.945 kb on - strand, within GFF909 at 980.153 kb on + strand, within GFF909 at 980.154 kb on - strand, within GFF909 at 980.154 kb on - strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.162 kb on + strand, within GFF909 at 980.163 kb on - strand, within GFF909 at 980.163 kb on - strand, within GFF909 at 980.264 kb on + strand, within GFF909 at 980.265 kb on - strand, within GFF909 at 980.265 kb on - strand, within GFF909 at 980.265 kb on - strand, within GFF909 at 980.328 kb on - strand, within GFF909 at 980.471 kb on + strand, within GFF909 at 980.472 kb on - strand, within GFF909 at 980.472 kb on - strand, within GFF909
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 978,099 + GFF907 0.86 -2.3 978,099 + GFF907 0.86 -0.2 978,100 - GFF907 0.86 +0.4 978,100 - GFF907 0.86 +0.2 978,100 - GFF907 0.86 +1.0 978,100 - GFF907 0.86 -0.1 978,100 - GFF907 0.86 +0.0 978,387 - -0.0 978,526 + +0.1 978,527 - +0.3 978,527 - +0.5 978,528 + -0.8 978,529 - +0.3 978,531 - -0.1 978,709 + +0.2 979,544 + -0.3 979,545 - -0.7 979,602 + -1.3 979,606 - +0.2 979,702 + +0.6 979,702 + -0.0 979,703 - -0.4 979,703 - -0.4 979,810 + -0.2 979,810 + -0.4 979,810 + -0.1 979,811 - +0.1 979,811 - -1.2 979,811 - -0.2 979,944 + GFF909 0.18 -0.1 979,944 + GFF909 0.18 +0.3 979,944 + GFF909 0.18 +0.4 979,944 + GFF909 0.18 +0.1 979,945 - GFF909 0.18 +0.5 980,153 + GFF909 0.34 -0.1 980,154 - GFF909 0.34 +0.1 980,154 - GFF909 0.34 +0.1 980,162 + GFF909 0.34 +1.1 980,162 + GFF909 0.34 -0.4 980,162 + GFF909 0.34 +0.2 980,162 + GFF909 0.34 -0.2 980,162 + GFF909 0.34 +0.2 980,162 + GFF909 0.34 -0.3 980,163 - GFF909 0.34 -0.5 980,163 - GFF909 0.34 -1.3 980,264 + GFF909 0.42 -1.0 980,265 - GFF909 0.42 -0.2 980,265 - GFF909 0.42 -0.0 980,265 - GFF909 0.42 -0.1 980,328 - GFF909 0.47 +0.1 980,471 + GFF909 0.57 +0.7 980,472 - GFF909 0.57 +0.3 980,472 - GFF909 0.57 -0.4
Or see this region's nucleotide sequence