Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS35090 and QEN71_RS35095 are separated by 563 nucleotides QEN71_RS35095 and QEN71_RS35100 are separated by 191 nucleotides QEN71_RS35100 and QEN71_RS35105 are separated by 349 nucleotides
QEN71_RS35090: QEN71_RS35090 - flagellar filament capping protein FliD, at 1,214,486 to 1,215,913
_RS35090
QEN71_RS35095: QEN71_RS35095 - HU family DNA-binding protein, at 1,216,477 to 1,216,755
_RS35095
QEN71_RS35100: QEN71_RS35100 - response regulator transcription factor, at 1,216,947 to 1,217,324
_RS35100
QEN71_RS35105: QEN71_RS35105 - methyl-accepting chemotaxis protein, at 1,217,674 to 1,219,230
_RS35105
Position (kb)
1216
1217 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1215.866 kb on + strand at 1215.866 kb on + strand at 1215.867 kb on - strand at 1216.131 kb on + strand at 1216.268 kb on + strand at 1216.269 kb on - strand at 1216.269 kb on - strand at 1216.519 kb on - strand, within QEN71_RS35095 at 1216.669 kb on + strand, within QEN71_RS35095 at 1216.808 kb on - strand at 1216.808 kb on - strand at 1216.914 kb on - strand at 1216.939 kb on - strand at 1217.483 kb on - strand at 1217.569 kb on + strand at 1217.648 kb on + strand at 1217.709 kb on + strand at 1217.709 kb on + strand at 1217.709 kb on + strand at 1217.710 kb on - strand at 1217.710 kb on - strand at 1217.747 kb on + strand at 1217.747 kb on + strand at 1217.747 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 1,215,866 + -0.8 1,215,866 + -0.2 1,215,867 - -0.2 1,216,131 + +0.3 1,216,268 + -0.4 1,216,269 - -0.3 1,216,269 - -0.2 1,216,519 - QEN71_RS35095 0.15 +0.8 1,216,669 + QEN71_RS35095 0.69 -2.0 1,216,808 - +0.6 1,216,808 - +2.5 1,216,914 - -0.7 1,216,939 - +0.7 1,217,483 - -0.2 1,217,569 + +0.7 1,217,648 + -1.0 1,217,709 + +0.4 1,217,709 + +0.5 1,217,709 + +2.1 1,217,710 - +0.2 1,217,710 - -0.5 1,217,747 + -0.9 1,217,747 + -0.7 1,217,747 + +0.5
Or see this region's nucleotide sequence