Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02790

Experiment: NL-CCM; spin-x control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; spin-x control
21,697	-				+0.2
21,709	-				-1.2
21,940	+		MPMX19_02789	0.33	-1.7
21,940	+		MPMX19_02789	0.33	-0.9
21,940	+		MPMX19_02789	0.33	-1.8
21,940	+		MPMX19_02789	0.33	-0.1
21,940	+		MPMX19_02789	0.33	+0.5
21,940	+		MPMX19_02789	0.33	+0.1
21,940	+		MPMX19_02789	0.33	-0.0
21,940	+		MPMX19_02789	0.33	+1.2
21,940	+		MPMX19_02789	0.33	-1.0
21,941	-		MPMX19_02789	0.33	+1.2
21,941	-		MPMX19_02789	0.33	+0.8
21,941	-		MPMX19_02789	0.33	+0.6
21,946	+		MPMX19_02789	0.34	-0.8
21,946	+		MPMX19_02789	0.34	-1.6
21,947	-		MPMX19_02789	0.34	+1.0
21,947	-		MPMX19_02789	0.34	-0.8
22,126	+		MPMX19_02789	0.60	-0.2
22,126	+		MPMX19_02789	0.60	-0.6
22,126	+		MPMX19_02789	0.60	-0.6
22,126	+		MPMX19_02789	0.60	+1.2
22,126	-		MPMX19_02789	0.60	-0.8
22,127	-		MPMX19_02789	0.60	-0.3
22,127	-		MPMX19_02789	0.60	-0.3
22,127	-		MPMX19_02789	0.60	+0.6
22,127	-		MPMX19_02789	0.60	-0.2
22,128	+		MPMX19_02789	0.60	-0.2
22,128	+		MPMX19_02789	0.60	-0.5
22,128	+		MPMX19_02789	0.60	-2.2
22,128	+		MPMX19_02789	0.60	-1.7
22,128	+		MPMX19_02789	0.60	-0.4
22,128	+		MPMX19_02789	0.60	-0.6
22,128	+		MPMX19_02789	0.60	+0.9
22,128	+		MPMX19_02789	0.60	-1.2
22,128	+		MPMX19_02789	0.60	+0.3
22,128	+		MPMX19_02789	0.60	-0.8
22,128	+		MPMX19_02789	0.60	+0.6
22,128	+		MPMX19_02789	0.60	-0.4
22,128	+		MPMX19_02789	0.60	+0.6
22,129	-		MPMX19_02789	0.60	+0.2
22,129	-		MPMX19_02789	0.60	+0.2
22,129	-		MPMX19_02789	0.60	-1.0
22,129	-		MPMX19_02789	0.60	-0.5
22,129	-		MPMX19_02789	0.60	-0.0
22,129	-		MPMX19_02789	0.60	-1.3
22,129	-		MPMX19_02789	0.60	+0.6
22,129	-		MPMX19_02789	0.60	+0.2
22,300	+		MPMX19_02789	0.85	+0.1
22,300	+		MPMX19_02789	0.85	-0.0
22,300	+		MPMX19_02789	0.85	-1.0
22,301	-		MPMX19_02789	0.85	-0.2
22,301	-		MPMX19_02789	0.85	-1.1
22,301	-		MPMX19_02789	0.85	-0.4
22,301	-		MPMX19_02789	0.85	+0.2
22,301	-		MPMX19_02789	0.85	-1.2
22,301	-		MPMX19_02789	0.85	+0.3
22,348	+				-0.5
22,348	+				+2.2
22,348	+				-1.0
22,349	-				-2.2
22,349	-				-0.7
22,349	-				+0.1
22,486	+				-0.4
22,504	+				-1.4
22,504	+				+0.7
22,591	+				-0.0
22,591	+				-0.8
22,591	+				+0.1
22,592	-				-2.4
22,606	+				-0.6
22,606	+				+0.3
22,606	+				-0.4
22,606	+				-1.7
22,606	+				-2.6
22,606	+				+2.8
22,607	-				-0.5
22,607	-				-0.4
22,607	-				-1.3
22,607	-				-0.0
22,607	-				-1.4
22,607	-				+0.2
22,780	+		MPMX19_02790	0.17	-0.0
22,780	+		MPMX19_02790	0.17	-1.0
22,780	+		MPMX19_02790	0.17	-0.4
22,780	+		MPMX19_02790	0.17	-1.2
22,781	-		MPMX19_02790	0.17	-2.0
22,781	-		MPMX19_02790	0.17	+0.6
22,781	-		MPMX19_02790	0.17	-1.2
22,837	+		MPMX19_02790	0.21	-1.2
22,879	+		MPMX19_02790	0.23	-1.9
22,879	+		MPMX19_02790	0.23	+0.2
22,879	+		MPMX19_02790	0.23	+1.2
22,879	+		MPMX19_02790	0.23	-0.3
22,879	+		MPMX19_02790	0.23	-0.6
22,880	-		MPMX19_02790	0.23	-1.0
22,880	-		MPMX19_02790	0.23	-2.5
23,110	+		MPMX19_02790	0.38	+0.5
23,111	-		MPMX19_02790	0.38	-0.2
23,111	-		MPMX19_02790	0.38	-0.2
23,111	-		MPMX19_02790	0.38	+0.1
23,111	-		MPMX19_02790	0.38	+1.4
23,111	-		MPMX19_02790	0.38	-1.0
23,218	+		MPMX19_02790	0.44	-0.2
23,218	+		MPMX19_02790	0.44	+0.5
23,218	+		MPMX19_02790	0.44	+0.7
23,218	+		MPMX19_02790	0.44	-0.1
23,254	+		MPMX19_02790	0.47	+1.3
23,254	+		MPMX19_02790	0.47	+1.2
23,254	+		MPMX19_02790	0.47	+0.4
23,254	+		MPMX19_02790	0.47	+1.4
23,254	+		MPMX19_02790	0.47	-0.5
23,254	+		MPMX19_02790	0.47	-0.9
23,254	+		MPMX19_02790	0.47	-0.8
23,254	+		MPMX19_02790	0.47	-0.8
23,254	+		MPMX19_02790	0.47	+0.3
23,254	+		MPMX19_02790	0.47	+0.5
23,255	-		MPMX19_02790	0.47	+0.8
23,255	-		MPMX19_02790	0.47	-0.1
23,255	-		MPMX19_02790	0.47	-1.6
23,255	-		MPMX19_02790	0.47	-0.6
23,255	-		MPMX19_02790	0.47	-1.5
23,255	-		MPMX19_02790	0.47	+0.5
23,255	-		MPMX19_02790	0.47	+0.5
23,255	-		MPMX19_02790	0.47	-0.5
23,255	-		MPMX19_02790	0.47	+0.2
23,255	-		MPMX19_02790	0.47	-0.2
23,255	-		MPMX19_02790	0.47	+0.6
23,255	-		MPMX19_02790	0.47	-0.4
23,255	-		MPMX19_02790	0.47	+0.6
23,255	-		MPMX19_02790	0.47	-1.6
23,440	+		MPMX19_02790	0.58	+1.0
23,440	+		MPMX19_02790	0.58	+1.6
23,533	+		MPMX19_02790	0.64	-0.2
23,533	+		MPMX19_02790	0.64	-0.2
23,533	+		MPMX19_02790	0.64	+0.1
23,534	-		MPMX19_02790	0.64	+0.8
23,534	-		MPMX19_02790	0.64	-0.2
23,534	-		MPMX19_02790	0.64	-1.9
23,534	-		MPMX19_02790	0.64	+0.1
23,605	-		MPMX19_02790	0.69	-1.0
23,938	+		MPMX19_02790	0.89	+0.8
23,938	+		MPMX19_02790	0.89	+0.4
23,938	+		MPMX19_02790	0.89	-0.8
23,938	+		MPMX19_02790	0.89	+0.2
23,938	+		MPMX19_02790	0.89	-1.8
23,938	+		MPMX19_02790	0.89	+2.6
23,938	+		MPMX19_02790	0.89	+0.3
23,938	+		MPMX19_02790	0.89	+0.2
23,938	+		MPMX19_02790	0.89	+0.3
23,938	+		MPMX19_02790	0.89	+1.1
23,938	+		MPMX19_02790	0.89	+0.8
23,938	+		MPMX19_02790	0.89	-1.4
23,939	-		MPMX19_02790	0.89	+0.7
23,939	-		MPMX19_02790	0.89	+0.2
23,939	-		MPMX19_02790	0.89	-1.1
23,939	-		MPMX19_02790	0.89	-0.4
23,939	-		MPMX19_02790	0.89	-0.4
23,939	-		MPMX19_02790	0.89	+0.6
23,945	-		MPMX19_02790	0.90	-1.2
23,945	-		MPMX19_02790	0.90	+1.4
24,037	+				-1.0
24,037	+				+0.2
24,038	-				-2.4
24,038	-				-0.5
24,038	-				-0.3
24,152	+				+0.4
24,152	+				-1.1
24,152	+				-0.2
24,153	-				-1.5
24,153	-				-0.5
24,153	-				+0.6
24,400	+				+0.2
24,400	+				-0.6
24,400	+				-0.1
24,400	+				-0.1
24,400	+				-0.3
24,400	+				-0.2
24,400	+				-0.2
24,400	+				+1.6
24,400	+				-0.7
24,401	-				+1.1
24,401	-				-0.5
24,401	-				-0.8
24,401	-				+1.0
24,401	-				-0.0
24,401	-				-0.0
24,401	-				-0.4
24,401	-				+1.3
24,718	+		MPMX19_02791	0.21	-0.4
24,718	+		MPMX19_02791	0.21	-1.1
24,959	-		MPMX19_02791	0.35	+0.8
25,029	+		MPMX19_02791	0.40	+0.6
25,029	+		MPMX19_02791	0.40	+1.6
25,029	+		MPMX19_02791	0.40	+1.2
25,029	+		MPMX19_02791	0.40	-1.2
25,029	+		MPMX19_02791	0.40	+0.1
25,029	+		MPMX19_02791	0.40	-1.0
25,029	+		MPMX19_02791	0.40	+0.7
25,030	-		MPMX19_02791	0.40	-0.8
25,030	-		MPMX19_02791	0.40	-1.2
25,030	-		MPMX19_02791	0.40	-0.3
25,030	-		MPMX19_02791	0.40	-1.8
25,030	-		MPMX19_02791	0.40	-0.4
25,030	-		MPMX19_02791	0.40	-1.2
25,030	-		MPMX19_02791	0.40	+0.2
25,030	-		MPMX19_02791	0.40	-1.6