Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01033

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,144,507	+		MIT1002_01032	0.44	+1.5
1,144,540	+		MIT1002_01032	0.47	+1.1
1,144,559	+		MIT1002_01032	0.48	-0.5
1,144,569	-		MIT1002_01032	0.49	-0.8
1,144,669	+		MIT1002_01032	0.57	-0.2
1,144,683	-		MIT1002_01032	0.59	+0.2
1,144,717	+		MIT1002_01032	0.62	+0.6
1,144,717	+		MIT1002_01032	0.62	+1.3
1,144,717	+		MIT1002_01032	0.62	-0.3
1,144,717	+		MIT1002_01032	0.62	-0.6
1,144,725	-		MIT1002_01032	0.62	-1.7
1,144,725	-		MIT1002_01032	0.62	+0.6
1,144,725	-		MIT1002_01032	0.62	-1.3
1,144,725	-		MIT1002_01032	0.62	+1.6
1,144,727	+		MIT1002_01032	0.62	-0.2
1,144,734	-		MIT1002_01032	0.63	+0.5
1,144,741	+		MIT1002_01032	0.64	+1.9
1,144,749	-		MIT1002_01032	0.64	+0.2
1,144,749	-		MIT1002_01032	0.64	+1.6
1,144,758	-		MIT1002_01032	0.65	-0.2
1,144,758	-		MIT1002_01032	0.65	-0.8
1,144,881	-		MIT1002_01032	0.75	-1.3
1,144,998	+		MIT1002_01032	0.85	-0.8
1,145,057	-				-0.0
1,145,126	-				-0.4
1,145,128	-				-1.4
1,145,179	+				-0.2
1,145,201	+				-0.7
1,145,206	+				-0.3
1,145,322	+				+0.1
1,145,322	+				-0.2
1,145,354	-				-0.5
1,145,370	+				+0.0
1,145,395	+				+0.3
1,145,420	-				-1.8
1,145,616	+		MIT1002_01033	0.30	-0.6
1,145,624	-		MIT1002_01033	0.31	+0.6
1,145,707	+		MIT1002_01033	0.48	+0.2
1,145,764	-		MIT1002_01033	0.60	-0.4
1,145,772	+		MIT1002_01033	0.62	+0.1
1,145,780	-		MIT1002_01033	0.63	-1.4
1,145,780	-		MIT1002_01033	0.63	-0.2
1,145,780	-		MIT1002_01033	0.63	-0.7
1,145,797	+		MIT1002_01033	0.67	-0.3
1,145,800	+		MIT1002_01033	0.67	-0.8
1,145,808	-		MIT1002_01033	0.69	+0.9
1,145,810	-		MIT1002_01033	0.70	-0.9
1,145,910	-				-1.1
1,146,001	+				+1.1
1,146,052	+				-0.4
1,146,053	+				-0.7
1,146,062	+				-0.1
1,146,083	-				-0.2
1,146,083	-				-0.6
1,146,199	+		MIT1002_01034	0.22	+1.8
1,146,237	-		MIT1002_01034	0.31	+0.8
1,146,319	+		MIT1002_01034	0.50	-1.5
1,146,319	+		MIT1002_01034	0.50	-0.5
1,146,327	-		MIT1002_01034	0.52	-0.9
1,146,369	+		MIT1002_01034	0.62	-1.2
1,146,369	+		MIT1002_01034	0.62	-1.8
1,146,434	-		MIT1002_01034	0.77	+1.6
1,146,468	-		MIT1002_01034	0.84	-0.2
1,146,544	+				+0.2
1,146,627	+		MIT1002_01035	0.16	-3.0
1,146,627	+		MIT1002_01035	0.16	-2.9
1,146,665	+		MIT1002_01035	0.28	-4.1
1,146,722	+		MIT1002_01035	0.45	+0.6
1,146,728	-		MIT1002_01035	0.47	-3.2
1,146,782	-		MIT1002_01035	0.63	-3.4
1,146,798	+		MIT1002_01035	0.68	-4.0
1,146,817	+		MIT1002_01035	0.74	-2.3
1,146,912	-				-3.4
1,146,947	-				-2.1