Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03561

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 1
3,984,761	-		MIT1002_03560	0.26	-2.2
3,985,488	+				+0.8
3,985,496	-				-2.5
3,985,512	+				-0.2
3,985,520	-				-3.3
3,985,574	-				+0.3
3,985,610	+				-0.8
3,985,610	+				-1.0
3,985,618	-				-0.1
3,985,649	-				-1.7
3,985,742	+				+0.6
3,985,750	-				+0.8
3,985,766	-				-0.9
3,985,768	+				-0.3
3,985,771	-				+1.3
3,985,778	+				-1.4
3,985,778	+				-0.6
3,985,820	-				+0.1
3,985,839	+				-1.6
3,985,844	+				-0.2
3,985,847	-				-2.1
3,985,847	-				+1.8
3,986,021	+		MIT1002_03561	0.16	-1.0
3,986,029	-		MIT1002_03561	0.17	-1.3
3,986,042	+		MIT1002_03561	0.17	-0.2
3,986,042	-		MIT1002_03561	0.17	+0.4
3,986,049	+		MIT1002_03561	0.17	-0.0
3,986,050	-		MIT1002_03561	0.17	+0.5
3,986,055	+		MIT1002_03561	0.18	+0.9
3,986,159	-		MIT1002_03561	0.21	-0.1
3,986,216	+		MIT1002_03561	0.23	-0.4
3,986,224	-		MIT1002_03561	0.24	-2.9
3,986,259	-		MIT1002_03561	0.25	-1.5
3,986,275	+		MIT1002_03561	0.26	-0.2
3,986,275	+		MIT1002_03561	0.26	+2.8
3,986,280	+		MIT1002_03561	0.26	-0.4
3,986,283	-		MIT1002_03561	0.26	+0.7
3,986,324	+		MIT1002_03561	0.27	-0.6
3,986,332	-		MIT1002_03561	0.28	-1.2
3,986,332	-		MIT1002_03561	0.28	-1.7
3,986,332	-		MIT1002_03561	0.28	-1.1
3,986,339	-		MIT1002_03561	0.28	+1.0
3,986,340	-		MIT1002_03561	0.28	-0.8
3,986,392	+		MIT1002_03561	0.30	-1.8
3,986,399	-		MIT1002_03561	0.30	-4.7
3,986,400	+		MIT1002_03561	0.30	-3.2
3,986,408	-		MIT1002_03561	0.31	+0.3
3,986,410	-		MIT1002_03561	0.31	-0.3
3,986,410	-		MIT1002_03561	0.31	+0.2
3,986,429	-		MIT1002_03561	0.31	-2.0
3,986,442	+		MIT1002_03561	0.32	+1.3
3,986,442	+		MIT1002_03561	0.32	-2.3
3,986,445	-		MIT1002_03561	0.32	+1.3
3,986,450	-		MIT1002_03561	0.32	-2.2
3,986,452	+		MIT1002_03561	0.32	-0.7
3,986,475	-		MIT1002_03561	0.33	+0.2
3,986,483	+		MIT1002_03561	0.33	-0.9
3,986,497	-		MIT1002_03561	0.34	+0.8
3,986,497	-		MIT1002_03561	0.34	-2.5
3,986,729	+		MIT1002_03561	0.42	+1.1
3,986,782	-		MIT1002_03561	0.44	+0.6
3,986,824	-		MIT1002_03561	0.46	-1.1
3,986,891	-		MIT1002_03561	0.48	-3.6
3,986,930	+		MIT1002_03561	0.50	-3.5
3,986,930	+		MIT1002_03561	0.50	-3.4
3,986,930	+		MIT1002_03561	0.50	+1.2
3,986,932	+		MIT1002_03561	0.50	-0.1
3,986,945	+		MIT1002_03561	0.50	+1.5
3,986,945	+		MIT1002_03561	0.50	+0.3
3,986,990	+		MIT1002_03561	0.52	+1.1
3,987,144	-		MIT1002_03561	0.58	-0.0
3,987,179	+		MIT1002_03561	0.59	-0.5
3,987,187	-		MIT1002_03561	0.59	-1.7
3,987,222	-		MIT1002_03561	0.60	+0.8
3,987,223	-		MIT1002_03561	0.60	+0.7
3,987,223	-		MIT1002_03561	0.60	-1.8
3,987,232	-		MIT1002_03561	0.61	-2.0
3,987,235	+		MIT1002_03561	0.61	-2.8
3,987,284	+		MIT1002_03561	0.63	-0.1
3,987,330	+		MIT1002_03561	0.64	+0.5
3,987,330	+		MIT1002_03561	0.64	-0.1
3,987,338	-		MIT1002_03561	0.65	-3.2
3,987,338	-		MIT1002_03561	0.65	-2.2
3,987,341	-		MIT1002_03561	0.65	+1.2
3,987,433	+		MIT1002_03561	0.68	+1.3
3,987,437	+		MIT1002_03561	0.68	+0.8
3,987,438	-		MIT1002_03561	0.68	+0.6
3,987,441	-		MIT1002_03561	0.69	-0.5
3,987,441	-		MIT1002_03561	0.69	-2.6
3,987,616	-		MIT1002_03561	0.75	-1.7
3,987,616	-		MIT1002_03561	0.75	-0.7
3,987,626	+		MIT1002_03561	0.75	+0.6
3,987,645	-		MIT1002_03561	0.76	-1.2
3,987,667	+		MIT1002_03561	0.77	-0.6
3,987,771	+		MIT1002_03561	0.81	-2.6
3,987,771	-		MIT1002_03561	0.81	+0.3
3,987,772	-		MIT1002_03561	0.81	-0.0
3,987,782	+		MIT1002_03561	0.81	-0.9
3,987,790	-		MIT1002_03561	0.81	-1.2
3,987,790	-		MIT1002_03561	0.81	-0.6
3,987,794	+		MIT1002_03561	0.81	-0.4
3,987,877	+		MIT1002_03561	0.85	+1.2
3,987,972	-		MIT1002_03561	0.88	+0.1
3,987,994	-		MIT1002_03561	0.89	-1.2
3,988,034	+				-2.3
3,988,048	+				+0.2
3,988,271	+				-0.8
3,988,271	+				+0.5
3,988,279	-				-1.0
3,988,281	+				-0.1
3,988,289	-				+0.2
3,989,033	+				+1.1
3,989,033	+				-1.4
3,989,033	+				-0.4
3,989,041	-				+1.5
3,989,083	+				+1.0
3,989,091	+				+0.3
3,989,091	+				+0.3
3,989,091	+				+0.4
3,989,091	+				-0.9
3,989,093	+				+0.4
3,989,093	+				+0.4
3,989,093	+				+0.0
3,989,093	+				+0.9
3,989,093	+				-0.4
3,989,093	+				+0.5
3,989,096	+				-0.3
3,989,096	-				-2.9
3,989,098	+				-0.1
3,989,098	+				-0.2
3,989,099	-				-0.9
3,989,099	-				+1.0
3,989,099	-				+2.2
3,989,099	-				+0.6
3,989,101	-				+1.8
3,989,101	-				-4.0
3,989,101	-				-1.3
3,989,101	-				-2.5
3,989,101	-				+0.3
3,989,101	-				-0.5
3,989,101	-				-0.7
3,989,101	-				-1.4
3,989,101	-				+0.9
3,989,101	-				-0.6
3,989,101	-				-0.3
3,989,104	-				+1.0
3,989,104	-				-1.5
3,989,111	-				+1.8
3,989,146	+		MIT1002_03563	0.11	-0.6
3,989,147	+		MIT1002_03563	0.11	-0.0
3,989,147	+		MIT1002_03563	0.11	-0.3
3,989,148	+		MIT1002_03563	0.11	+1.5
3,989,148	+		MIT1002_03563	0.11	+1.2
3,989,148	+		MIT1002_03563	0.11	-0.7
3,989,148	+		MIT1002_03563	0.11	-0.4
3,989,148	+		MIT1002_03563	0.11	-1.0
3,989,148	+		MIT1002_03563	0.11	-3.4
3,989,148	+		MIT1002_03563	0.11	-3.8
3,989,148	+		MIT1002_03563	0.11	-1.2
3,989,148	+		MIT1002_03563	0.11	+1.1
3,989,148	+		MIT1002_03563	0.11	+0.7
3,989,148	+		MIT1002_03563	0.11	+0.4
3,989,148	+		MIT1002_03563	0.11	-0.5
3,989,148	+		MIT1002_03563	0.11	-3.9
3,989,148	+		MIT1002_03563	0.11	-1.0
3,989,148	+		MIT1002_03563	0.11	-0.2
3,989,148	+		MIT1002_03563	0.11	-1.9
3,989,148	+		MIT1002_03563	0.11	-1.3
3,989,150	+		MIT1002_03563	0.12	-0.7
3,989,151	-		MIT1002_03563	0.12	+0.4
3,989,155	-		MIT1002_03563	0.12	+0.2
3,989,155	-		MIT1002_03563	0.12	+0.5
3,989,155	-		MIT1002_03563	0.12	+0.3
3,989,155	-		MIT1002_03563	0.12	-1.4
3,989,155	-		MIT1002_03563	0.12	+0.6
3,989,155	-		MIT1002_03563	0.12	+1.6
3,989,156	-		MIT1002_03563	0.12	-0.1
3,989,156	-		MIT1002_03563	0.12	-0.9
3,989,156	-		MIT1002_03563	0.12	+1.8
3,989,156	-		MIT1002_03563	0.12	-0.3
3,989,156	-		MIT1002_03563	0.12	-0.3
3,989,156	-		MIT1002_03563	0.12	+1.3
3,989,156	-		MIT1002_03563	0.12	-1.5
3,989,156	-		MIT1002_03563	0.12	+0.4
3,989,156	-		MIT1002_03563	0.12	-1.6
3,989,156	-		MIT1002_03563	0.12	-0.3
3,989,156	-		MIT1002_03563	0.12	+0.5
3,989,158	-		MIT1002_03563	0.13	+1.6
3,989,159	+		MIT1002_03563	0.13	+0.3
3,989,172	+		MIT1002_03563	0.14	+1.3
3,989,172	+		MIT1002_03563	0.14	+1.1
3,989,178	+		MIT1002_03563	0.15	-3.2
3,989,180	-		MIT1002_03563	0.15	-3.8
3,989,183	+		MIT1002_03563	0.15	-2.8
3,989,183	+		MIT1002_03563	0.15	+1.8
3,989,191	-		MIT1002_03563	0.16	+1.5
3,989,193	+		MIT1002_03563	0.16	-1.0
3,989,193	+		MIT1002_03563	0.16	+0.7
3,989,193	+		MIT1002_03563	0.16	+0.8
3,989,193	+		MIT1002_03563	0.16	+0.4
3,989,193	+		MIT1002_03563	0.16	+0.4
3,989,193	+		MIT1002_03563	0.16	+0.6
3,989,193	+		MIT1002_03563	0.16	-2.1
3,989,193	+		MIT1002_03563	0.16	-0.0
3,989,200	-		MIT1002_03563	0.17	-0.1
3,989,201	-		MIT1002_03563	0.17	-2.3
3,989,201	-		MIT1002_03563	0.17	-0.9
3,989,201	-		MIT1002_03563	0.17	-0.2
3,989,201	-		MIT1002_03563	0.17	-0.3
3,989,201	-		MIT1002_03563	0.17	+0.4
3,989,201	-		MIT1002_03563	0.17	-0.8
3,989,201	-		MIT1002_03563	0.17	+1.5
3,989,201	-		MIT1002_03563	0.17	+0.8
3,989,201	-		MIT1002_03563	0.17	-1.1
3,989,205	-		MIT1002_03563	0.18	+0.5
3,989,205	-		MIT1002_03563	0.18	-1.7
3,989,207	+		MIT1002_03563	0.18	-0.4
3,989,211	-		MIT1002_03563	0.18	+0.5
3,989,215	-		MIT1002_03563	0.19	-0.7
3,989,230	+		MIT1002_03563	0.21	-2.3
3,989,253	-		MIT1002_03563	0.23	+0.1
3,989,262	+		MIT1002_03563	0.24	-1.5
3,989,276	+		MIT1002_03563	0.26	-1.7
3,989,276	+		MIT1002_03563	0.26	-4.2
3,989,281	+		MIT1002_03563	0.26	-2.9
3,989,286	-		MIT1002_03563	0.27	+1.7
3,989,286	-		MIT1002_03563	0.27	-0.8