Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01150

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
1,261,536	-		MIT1002_01148	0.86	-1.2
1,261,544	+		MIT1002_01148	0.87	-0.9
1,261,554	+		MIT1002_01148	0.88	-1.7
1,261,562	+		MIT1002_01148	0.88	-1.9
1,261,570	-		MIT1002_01148	0.89	-1.6
1,261,578	-		MIT1002_01148	0.90	-0.7
1,261,656	-				-0.2
1,261,782	-				+0.7
1,261,791	+				-0.4
1,261,792	-				+4.0
1,261,792	-				-1.0
1,261,799	-				-0.4
1,261,882	+				-0.7
1,261,908	+		MIT1002_01149	0.11	+0.2
1,261,925	+		MIT1002_01149	0.14	+0.9
1,261,945	+		MIT1002_01149	0.17	-1.7
1,261,968	-		MIT1002_01149	0.20	-0.3
1,261,981	+		MIT1002_01149	0.22	-0.5
1,261,981	+		MIT1002_01149	0.22	+0.0
1,261,981	+		MIT1002_01149	0.22	+2.1
1,261,981	+		MIT1002_01149	0.22	+1.4
1,261,989	-		MIT1002_01149	0.24	-0.4
1,262,041	-		MIT1002_01149	0.31	-2.1
1,262,077	+		MIT1002_01149	0.37	-0.5
1,262,261	-		MIT1002_01149	0.65	+0.6
1,262,261	-		MIT1002_01149	0.65	+0.2
1,262,261	-		MIT1002_01149	0.65	+1.6
1,262,264	+		MIT1002_01149	0.66	+0.6
1,262,266	-		MIT1002_01149	0.66	-0.5
1,262,333	-		MIT1002_01149	0.76	+2.3
1,262,370	-		MIT1002_01149	0.82	+0.4
1,262,410	-		MIT1002_01149	0.88	-0.2
1,262,418	-		MIT1002_01149	0.89	+1.7
1,262,444	-				-0.2
1,262,455	+				+0.0
1,262,463	-				+0.2
1,262,490	+				+1.4
1,262,508	+				-0.4
1,262,509	-				-0.7
1,262,583	-		MIT1002_01150	0.10	-0.6
1,262,653	+		MIT1002_01150	0.25	-0.5
1,262,653	+		MIT1002_01150	0.25	-3.8
1,262,653	+		MIT1002_01150	0.25	-1.3
1,262,653	+		MIT1002_01150	0.25	-1.2
1,262,661	-		MIT1002_01150	0.27	-1.1
1,262,661	-		MIT1002_01150	0.27	-4.9
1,262,661	-		MIT1002_01150	0.27	+1.6
1,262,706	+		MIT1002_01150	0.37	-3.6
1,262,714	-		MIT1002_01150	0.38	+0.3
1,262,795	+		MIT1002_01150	0.56	-1.7
1,262,809	-		MIT1002_01150	0.59	-0.3
1,262,894	+		MIT1002_01150	0.77	+1.4
1,262,901	+		MIT1002_01150	0.78	-3.4
1,262,923	+		MIT1002_01150	0.83	-1.6
1,263,139	-				-0.5
1,263,146	-				-0.3
1,263,187	+				-0.1
1,263,195	-				-2.4
1,263,203	-				-1.7
1,263,286	-				+0.4
1,263,407	+				-1.5
1,263,415	-				-3.4
1,263,427	+		MIT1002_01151	0.11	+0.3
1,263,468	+		MIT1002_01151	0.15	-1.9
1,263,477	-		MIT1002_01151	0.16	-0.4
1,263,492	+		MIT1002_01151	0.17	-0.7
1,263,500	-		MIT1002_01151	0.18	-0.1
1,263,636	+		MIT1002_01151	0.31	-0.8
1,263,644	-		MIT1002_01151	0.32	-1.7
1,263,646	+		MIT1002_01151	0.32	+0.9
1,263,699	+		MIT1002_01151	0.37	-0.4
1,263,788	-		MIT1002_01151	0.45	-0.8
1,263,816	-		MIT1002_01151	0.48	-1.3
1,263,816	-		MIT1002_01151	0.48	-2.1
1,263,816	-		MIT1002_01151	0.48	-0.4
1,263,838	-		MIT1002_01151	0.50	-1.6
1,263,838	-		MIT1002_01151	0.50	+3.1
1,263,838	-		MIT1002_01151	0.50	-1.5
1,263,853	+		MIT1002_01151	0.51	-0.2
1,263,860	+		MIT1002_01151	0.52	-1.0
1,263,868	-		MIT1002_01151	0.53	+0.0
1,263,891	+		MIT1002_01151	0.55	-1.3
1,263,908	+		MIT1002_01151	0.56	-2.2
1,263,915	+		MIT1002_01151	0.57	-0.7
1,263,915	+		MIT1002_01151	0.57	-0.2
1,263,915	+		MIT1002_01151	0.57	-1.5
1,263,916	-		MIT1002_01151	0.57	-0.3
1,263,923	-		MIT1002_01151	0.58	-2.4
1,263,980	+		MIT1002_01151	0.63	-1.9