Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS31405 and QEN71_RS31410 are separated by 37 nucleotides QEN71_RS31410 and QEN71_RS31415 are separated by 9 nucleotides QEN71_RS31415 and QEN71_RS31420 are separated by 13 nucleotides
QEN71_RS31405: QEN71_RS31405 - FAD-dependent oxidoreductase, at 394,239 to 395,435
_RS31405
QEN71_RS31410: QEN71_RS31410 - NAD(P)-dependent oxidoreductase, at 395,473 to 396,306
_RS31410
QEN71_RS31415: QEN71_RS31415 - hydantoinase B/oxoprolinase family protein, at 396,316 to 397,998
_RS31415
QEN71_RS31420: QEN71_RS31420 - hydantoinase/oxoprolinase family protein, at 398,012 to 400,111
_RS31420
Position (kb) 396
397
398 Strain fitness (log2 ratio) -2
-1
0
1 at 395.688 kb on + strand, within QEN71_RS31410 at 395.841 kb on - strand, within QEN71_RS31410 at 395.841 kb on - strand, within QEN71_RS31410 at 395.841 kb on - strand, within QEN71_RS31410 at 395.936 kb on + strand, within QEN71_RS31410 at 395.936 kb on + strand, within QEN71_RS31410 at 395.966 kb on + strand, within QEN71_RS31410 at 396.005 kb on + strand, within QEN71_RS31410 at 396.006 kb on - strand, within QEN71_RS31410 at 396.006 kb on - strand, within QEN71_RS31410 at 396.015 kb on - strand, within QEN71_RS31410 at 396.318 kb on - strand at 396.318 kb on - strand at 396.390 kb on - strand at 397.136 kb on + strand, within QEN71_RS31415 at 397.136 kb on + strand, within QEN71_RS31415 at 397.136 kb on + strand, within QEN71_RS31415 at 397.137 kb on - strand, within QEN71_RS31415 at 397.384 kb on + strand, within QEN71_RS31415 at 397.566 kb on - strand, within QEN71_RS31415 at 397.739 kb on + strand, within QEN71_RS31415 at 397.739 kb on + strand, within QEN71_RS31415 at 397.739 kb on + strand, within QEN71_RS31415 at 397.739 kb on + strand, within QEN71_RS31415 at 397.740 kb on - strand, within QEN71_RS31415 at 397.858 kb on - strand at 397.886 kb on - strand at 397.989 kb on + strand at 397.989 kb on + strand at 398.014 kb on - strand at 398.234 kb on + strand, within QEN71_RS31420 at 398.358 kb on + strand, within QEN71_RS31420 at 398.358 kb on + strand, within QEN71_RS31420 at 398.454 kb on + strand, within QEN71_RS31420
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 395,688 + QEN71_RS31410 0.26 +0.1 395,841 - QEN71_RS31410 0.44 -1.0 395,841 - QEN71_RS31410 0.44 +0.3 395,841 - QEN71_RS31410 0.44 -1.8 395,936 + QEN71_RS31410 0.56 +0.0 395,936 + QEN71_RS31410 0.56 -1.9 395,966 + QEN71_RS31410 0.59 -0.4 396,005 + QEN71_RS31410 0.64 +1.6 396,006 - QEN71_RS31410 0.64 -0.0 396,006 - QEN71_RS31410 0.64 -0.3 396,015 - QEN71_RS31410 0.65 -0.7 396,318 - +0.1 396,318 - +0.0 396,390 - -0.9 397,136 + QEN71_RS31415 0.49 -0.3 397,136 + QEN71_RS31415 0.49 +1.2 397,136 + QEN71_RS31415 0.49 -1.1 397,137 - QEN71_RS31415 0.49 +0.1 397,384 + QEN71_RS31415 0.63 +1.5 397,566 - QEN71_RS31415 0.74 -1.2 397,739 + QEN71_RS31415 0.85 -1.4 397,739 + QEN71_RS31415 0.85 -0.4 397,739 + QEN71_RS31415 0.85 +0.8 397,739 + QEN71_RS31415 0.85 -1.4 397,740 - QEN71_RS31415 0.85 -1.1 397,858 - -1.1 397,886 - -1.1 397,989 + -0.8 397,989 + +0.4 398,014 - -0.4 398,234 + QEN71_RS31420 0.11 -0.3 398,358 + QEN71_RS31420 0.16 -0.5 398,358 + QEN71_RS31420 0.16 +1.4 398,454 + QEN71_RS31420 0.21 +0.4
Or see this region's nucleotide sequence