Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01922

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
2,005,004	+		MPMX19_01921	0.36	-1.1
2,005,004	+		MPMX19_01921	0.36	-2.0
2,005,004	+		MPMX19_01921	0.36	-1.9
2,005,004	+		MPMX19_01921	0.36	-1.0
2,005,004	+		MPMX19_01921	0.36	-0.9
2,005,004	+		MPMX19_01921	0.36	-0.0
2,005,004	+		MPMX19_01921	0.36	-0.7
2,005,004	+		MPMX19_01921	0.36	-0.5
2,005,005	-		MPMX19_01921	0.36	+0.1
2,005,005	-		MPMX19_01921	0.36	+0.1
2,005,005	-		MPMX19_01921	0.36	+1.0
2,005,005	-		MPMX19_01921	0.36	-1.7
2,005,005	-		MPMX19_01921	0.36	-1.3
2,005,005	-		MPMX19_01921	0.36	+0.4
2,005,090	+		MPMX19_01921	0.45	-0.2
2,005,090	+		MPMX19_01921	0.45	-0.8
2,005,090	+		MPMX19_01921	0.45	-0.7
2,005,090	+		MPMX19_01921	0.45	-0.8
2,005,090	+		MPMX19_01921	0.45	+0.2
2,005,090	+		MPMX19_01921	0.45	-0.5
2,005,090	+		MPMX19_01921	0.45	-1.1
2,005,091	-		MPMX19_01921	0.45	+0.8
2,005,091	-		MPMX19_01921	0.45	+3.0
2,005,091	-		MPMX19_01921	0.45	-0.3
2,005,091	-		MPMX19_01921	0.45	+0.5
2,005,091	-		MPMX19_01921	0.45	-0.9
2,005,091	-		MPMX19_01921	0.45	-0.2
2,005,099	+		MPMX19_01921	0.46	-1.8
2,005,099	+		MPMX19_01921	0.46	-0.4
2,005,099	+		MPMX19_01921	0.46	-0.2
2,005,099	+		MPMX19_01921	0.46	-0.2
2,005,099	+		MPMX19_01921	0.46	-0.9
2,005,099	+		MPMX19_01921	0.46	+0.2
2,005,099	+		MPMX19_01921	0.46	+0.1
2,005,099	+		MPMX19_01921	0.46	-1.3
2,005,099	+		MPMX19_01921	0.46	+1.0
2,005,099	+		MPMX19_01921	0.46	+0.4
2,005,100	-		MPMX19_01921	0.46	+0.9
2,005,100	-		MPMX19_01921	0.46	+1.3
2,005,100	-		MPMX19_01921	0.46	-1.5
2,005,100	-		MPMX19_01921	0.46	-0.3
2,005,100	-		MPMX19_01921	0.46	-0.5
2,005,100	-		MPMX19_01921	0.46	+0.7
2,005,100	-		MPMX19_01921	0.46	-0.8
2,005,100	-		MPMX19_01921	0.46	-1.1
2,005,100	-		MPMX19_01921	0.46	-0.9
2,005,100	-		MPMX19_01921	0.46	+0.1
2,005,100	-		MPMX19_01921	0.46	+0.7
2,005,100	-		MPMX19_01921	0.46	-0.7
2,005,100	-		MPMX19_01921	0.46	-1.3
2,005,321	+		MPMX19_01921	0.68	+0.9
2,005,321	+		MPMX19_01921	0.68	+1.0
2,005,321	+		MPMX19_01921	0.68	-1.7
2,005,321	+		MPMX19_01921	0.68	-0.5
2,005,321	+		MPMX19_01921	0.68	-0.3
2,005,321	+		MPMX19_01921	0.68	-0.9
2,005,321	+		MPMX19_01921	0.68	-0.6
2,005,321	+		MPMX19_01921	0.68	+0.1
2,005,321	+		MPMX19_01921	0.68	+0.9
2,005,321	+		MPMX19_01921	0.68	+0.9
2,005,321	+		MPMX19_01921	0.68	-0.8
2,005,321	+		MPMX19_01921	0.68	+0.4
2,005,321	+		MPMX19_01921	0.68	-0.1
2,005,322	-		MPMX19_01921	0.68	-1.1
2,005,322	-		MPMX19_01921	0.68	-1.3
2,005,322	-		MPMX19_01921	0.68	-0.3
2,005,322	-		MPMX19_01921	0.68	+1.2
2,005,322	-		MPMX19_01921	0.68	-1.3
2,005,322	-		MPMX19_01921	0.68	-0.8
2,005,322	-		MPMX19_01921	0.68	-1.7
2,005,322	-		MPMX19_01921	0.68	-0.6
2,005,322	-		MPMX19_01921	0.68	-0.8
2,005,322	-		MPMX19_01921	0.68	-1.5
2,005,322	-		MPMX19_01921	0.68	-1.1
2,005,322	-		MPMX19_01921	0.68	-1.5
2,005,477	+		MPMX19_01921	0.83	+0.6
2,005,477	+		MPMX19_01921	0.83	-1.3
2,005,477	+		MPMX19_01921	0.83	-0.1
2,005,477	+		MPMX19_01921	0.83	-1.1
2,005,477	+		MPMX19_01921	0.83	-1.7
2,005,477	+		MPMX19_01921	0.83	-2.0
2,005,477	+		MPMX19_01921	0.83	-0.0
2,005,477	+		MPMX19_01921	0.83	+1.4
2,005,477	+		MPMX19_01921	0.83	+1.1
2,005,477	+		MPMX19_01921	0.83	+0.7
2,005,477	+		MPMX19_01921	0.83	-1.1
2,005,477	+		MPMX19_01921	0.83	-1.7
2,005,478	-		MPMX19_01921	0.83	-0.7
2,005,478	-		MPMX19_01921	0.83	-3.8
2,005,478	-		MPMX19_01921	0.83	-0.5
2,005,478	-		MPMX19_01921	0.83	-0.5
2,005,478	-		MPMX19_01921	0.83	-1.1
2,005,478	-		MPMX19_01921	0.83	-1.3
2,005,478	-		MPMX19_01921	0.83	-0.5
2,005,478	-		MPMX19_01921	0.83	+0.7
2,005,478	-		MPMX19_01921	0.83	+0.7
2,005,478	-		MPMX19_01921	0.83	-0.2
2,005,478	-		MPMX19_01921	0.83	-0.2
2,005,478	-		MPMX19_01921	0.83	+0.1
2,005,478	-		MPMX19_01921	0.83	+0.1
2,005,478	-		MPMX19_01921	0.83	-2.0
2,005,647	+				-0.3
2,005,647	+				-0.4
2,005,648	-				-0.9
2,005,648	-				+0.4
2,005,653	+				-0.5
2,005,653	+				-1.1
2,005,653	+				+0.9
2,005,653	+				-1.1
2,005,653	+				+1.1
2,005,653	+				+1.1
2,005,653	+				-0.2
2,005,653	+				+0.4
2,005,654	-				-0.7
2,005,654	-				-0.3
2,005,654	-				-0.3
2,005,654	-				+0.9
2,005,654	-				-1.8
2,005,654	-				+0.3
2,005,654	-				-0.3
2,005,654	-				-0.2
2,005,655	+				+0.4
2,005,655	+				+0.3
2,005,655	+				+0.0
2,005,655	+				-0.7
2,005,655	+				-1.3
2,005,656	-				-0.8
2,005,656	-				-0.2
2,005,656	-				-1.8
2,005,670	+				-0.7
2,005,785	-				+0.1
2,006,180	+		MPMX19_01922	0.37	+0.8
2,006,180	+		MPMX19_01922	0.37	-0.0
2,006,180	+		MPMX19_01922	0.37	-0.3
2,006,180	+		MPMX19_01922	0.37	-0.5
2,006,181	-		MPMX19_01922	0.37	+0.7
2,006,181	-		MPMX19_01922	0.37	-1.9
2,006,181	-		MPMX19_01922	0.37	+0.3
2,006,181	-		MPMX19_01922	0.37	+0.2
2,006,181	-		MPMX19_01922	0.37	+1.2
2,006,181	-		MPMX19_01922	0.37	-0.3
2,006,181	-		MPMX19_01922	0.37	-0.3
2,006,181	-		MPMX19_01922	0.37	+0.7
2,006,354	+		MPMX19_01922	0.52	-1.4
2,006,354	+		MPMX19_01922	0.52	-1.1
2,006,354	+		MPMX19_01922	0.52	-0.3
2,006,354	+		MPMX19_01922	0.52	-1.4
2,006,354	+		MPMX19_01922	0.52	-0.7
2,006,354	+		MPMX19_01922	0.52	-0.9
2,006,354	+		MPMX19_01922	0.52	+0.8
2,006,354	+		MPMX19_01922	0.52	+1.1
2,006,354	+		MPMX19_01922	0.52	-1.1
2,006,354	+		MPMX19_01922	0.52	-1.9
2,006,354	+		MPMX19_01922	0.52	-0.2
2,006,354	+		MPMX19_01922	0.52	+0.6
2,006,354	+		MPMX19_01922	0.52	-1.7
2,006,354	+		MPMX19_01922	0.52	-0.7
2,006,354	+		MPMX19_01922	0.52	-0.7
2,006,354	+		MPMX19_01922	0.52	+0.3
2,006,355	-		MPMX19_01922	0.52	-1.9
2,006,355	-		MPMX19_01922	0.52	-1.5
2,006,355	-		MPMX19_01922	0.52	-1.0
2,006,355	-		MPMX19_01922	0.52	-0.2
2,006,355	-		MPMX19_01922	0.52	+1.1
2,006,355	-		MPMX19_01922	0.52	+1.4
2,006,355	-		MPMX19_01922	0.52	-2.7
2,006,355	-		MPMX19_01922	0.52	+0.1
2,006,355	-		MPMX19_01922	0.52	-1.5
2,006,355	-		MPMX19_01922	0.52	-1.8
2,006,355	-		MPMX19_01922	0.52	-0.9
2,006,355	-		MPMX19_01922	0.52	+0.9
2,006,355	-		MPMX19_01922	0.52	-1.7
2,006,355	-		MPMX19_01922	0.52	-0.3
2,006,355	-		MPMX19_01922	0.52	-2.1
2,006,355	-		MPMX19_01922	0.52	+0.7
2,006,355	-		MPMX19_01922	0.52	+0.9
2,006,355	-		MPMX19_01922	0.52	-0.3
2,006,355	-		MPMX19_01922	0.52	-1.7
2,006,355	-		MPMX19_01922	0.52	+0.8
2,006,378	+		MPMX19_01922	0.54	-0.1
2,006,378	+		MPMX19_01922	0.54	-1.8
2,006,378	+		MPMX19_01922	0.54	-1.2
2,006,378	+		MPMX19_01922	0.54	-1.1
2,006,378	+		MPMX19_01922	0.54	+0.1
2,006,378	+		MPMX19_01922	0.54	-0.9
2,006,379	-		MPMX19_01922	0.54	-1.9
2,006,379	-		MPMX19_01922	0.54	-2.0
2,006,379	-		MPMX19_01922	0.54	-0.8
2,006,379	-		MPMX19_01922	0.54	-0.7
2,006,379	-		MPMX19_01922	0.54	-1.5
2,006,379	-		MPMX19_01922	0.54	-0.9
2,006,496	+		MPMX19_01922	0.64	+0.5
2,006,496	+		MPMX19_01922	0.64	-1.8
2,006,497	-		MPMX19_01922	0.65	-1.1
2,006,670	-		MPMX19_01922	0.80	-0.3
2,006,670	-		MPMX19_01922	0.80	+0.7
2,006,670	-		MPMX19_01922	0.80	-1.6
2,006,935	+				-0.8
2,006,968	+				-0.7
2,006,968	+				-0.5
2,006,968	+				-0.5
2,006,968	+				-0.3
2,006,968	+				+0.1
2,006,968	+				-1.1
2,006,968	+				-0.7
2,006,968	+				-0.3
2,006,968	+				-1.3
2,006,968	+				+0.1
2,006,968	+				-1.7
2,006,968	+				+1.2
2,006,968	+				-2.0
2,006,968	+				+0.1
2,006,968	+				-1.7
2,006,968	+				+0.3
2,006,968	+				-0.1
2,006,968	+				+0.1
2,006,968	+				+0.4
2,006,968	+				-0.1
2,006,968	+				-0.5
2,006,968	+				-3.0
2,006,968	+				-1.0
2,006,968	+				+0.5
2,006,968	+				+0.1
2,006,968	+				-0.2
2,006,968	+				+0.2
2,006,968	+				-0.2
2,006,968	+				+1.2
2,006,968	+				+0.1
2,006,968	+				-1.7
2,006,968	+				-0.3
2,006,969	-				-0.0
2,006,969	-				+0.6
2,006,969	-				-0.6
2,006,969	-				+0.3
2,006,969	-				-1.1
2,006,969	-				-0.5
2,006,969	-				-1.5
2,006,969	-				+1.3
2,006,969	-				+0.8
2,006,969	-				-0.8
2,006,969	-				-0.6
2,006,969	-				-0.3
2,006,969	-				-0.0
2,006,969	-				-2.1
2,006,969	-				-0.4
2,006,969	-				-1.5
2,006,969	-				+1.4
2,006,969	-				-0.0
2,006,969	-				-0.4
2,006,969	-				-0.6
2,006,969	-				-0.9
2,006,969	-				-0.3
2,006,969	-				-1.3
2,006,969	-				-0.4
2,006,969	-				-1.8
2,006,969	-				-1.1
2,006,969	-				-1.0
2,006,969	-				-0.3
2,006,969	-				+2.7
2,006,969	-				+0.1
2,006,969	-				+0.3
2,006,969	-				-0.7
2,006,969	-				-0.2
2,006,969	-				+0.6
2,006,969	-				-0.8
2,006,969	-				+1.3
2,006,987	+				-0.1
2,006,987	+				-1.7
2,006,987	+				-0.0
2,006,988	-				-0.9
2,006,988	-				-0.3
2,006,988	-				-1.8
2,006,988	-				-0.0
2,007,035	+				-0.5
2,007,035	+				-0.3
2,007,035	+				-0.7
2,007,035	+				+0.1
2,007,035	+				-0.7
2,007,035	+				+0.1
2,007,035	+				-1.9
2,007,035	+				+1.0
2,007,035	+				-0.5
2,007,035	+				-1.7
2,007,035	+				-0.1
2,007,035	+				-0.7
2,007,035	+				-0.9
2,007,035	+				-1.5
2,007,035	+				-0.2
2,007,035	+				-0.3
2,007,035	+				+0.4
2,007,035	+				+0.3
2,007,035	+				-0.6
2,007,036	-				+0.1
2,007,036	-				-2.2
2,007,036	-				+1.1
2,007,036	-				-1.1
2,007,036	-				+1.0
2,007,036	-				+0.4
2,007,036	-				-0.9
2,007,036	-				-1.4
2,007,036	-				-0.9
2,007,036	-				-1.7
2,007,036	-				-0.3
2,007,036	-				-2.0
2,007,036	-				-0.1
2,007,036	-				-0.5
2,007,036	-				-0.8
2,007,526	+		MPMX19_01923	0.30	-0.0
2,007,526	+		MPMX19_01923	0.30	-0.3
2,007,526	+		MPMX19_01923	0.30	-1.2
2,007,526	+		MPMX19_01923	0.30	-1.1
2,007,526	+		MPMX19_01923	0.30	-1.0
2,007,526	+		MPMX19_01923	0.30	-1.4
2,007,526	+		MPMX19_01923	0.30	-2.6
2,007,526	+		MPMX19_01923	0.30	-0.9
2,007,526	+		MPMX19_01923	0.30	-1.9
2,007,526	+		MPMX19_01923	0.30	-1.7
2,007,526	+		MPMX19_01923	0.30	-2.3
2,007,526	+		MPMX19_01923	0.30	+0.7
2,007,527	-		MPMX19_01923	0.30	-0.1
2,007,527	-		MPMX19_01923	0.30	-0.6
2,007,527	-		MPMX19_01923	0.30	-1.5
2,007,527	-		MPMX19_01923	0.30	-0.3
2,007,527	-		MPMX19_01923	0.30	-0.7
2,007,527	-		MPMX19_01923	0.30	-0.7
2,007,527	-		MPMX19_01923	0.30	-0.2
2,007,527	-		MPMX19_01923	0.30	-1.5
2,007,527	-		MPMX19_01923	0.30	-0.9
2,007,527	-		MPMX19_01923	0.30	-0.5
2,007,527	-		MPMX19_01923	0.30	-1.7
2,007,527	-		MPMX19_01923	0.30	-1.4
2,007,527	-		MPMX19_01923	0.30	-0.1
2,007,569	+		MPMX19_01923	0.32	+0.1
2,007,569	+		MPMX19_01923	0.32	-2.9
2,007,569	+		MPMX19_01923	0.32	+0.3
2,007,569	+		MPMX19_01923	0.32	-1.0
2,007,569	+		MPMX19_01923	0.32	-0.5
2,007,569	+		MPMX19_01923	0.32	-1.7
2,007,569	+		MPMX19_01923	0.32	-1.9
2,007,569	+		MPMX19_01923	0.32	-0.7
2,007,569	+		MPMX19_01923	0.32	-0.3
2,007,569	+		MPMX19_01923	0.32	-0.2
2,007,569	+		MPMX19_01923	0.32	+1.1
2,007,569	+		MPMX19_01923	0.32	+0.9
2,007,569	+		MPMX19_01923	0.32	-0.3
2,007,569	+		MPMX19_01923	0.32	-0.3
2,007,569	+		MPMX19_01923	0.32	-0.2
2,007,569	+		MPMX19_01923	0.32	-1.1
2,007,570	-		MPMX19_01923	0.32	-0.1
2,007,570	-		MPMX19_01923	0.32	+0.9
2,007,570	-		MPMX19_01923	0.32	+0.9
2,007,570	-		MPMX19_01923	0.32	-0.7
2,007,570	-		MPMX19_01923	0.32	-0.8
2,007,570	-		MPMX19_01923	0.32	-0.9
2,007,570	-		MPMX19_01923	0.32	-1.5
2,007,570	-		MPMX19_01923	0.32	-2.0
2,007,570	-		MPMX19_01923	0.32	-1.5
2,007,570	-		MPMX19_01923	0.32	+2.2
2,007,570	-		MPMX19_01923	0.32	-1.5
2,007,570	-		MPMX19_01923	0.32	-1.0
2,007,570	-		MPMX19_01923	0.32	-2.3
2,007,570	-		MPMX19_01923	0.32	+0.7
2,007,570	-		MPMX19_01923	0.32	-0.3
2,007,572	+		MPMX19_01923	0.32	-2.1
2,007,572	+		MPMX19_01923	0.32	-1.0
2,007,573	-		MPMX19_01923	0.32	-0.1
2,007,573	-		MPMX19_01923	0.32	-0.0
2,007,573	-		MPMX19_01923	0.32	-1.1
2,007,573	-		MPMX19_01923	0.32	+0.8
2,007,573	-		MPMX19_01923	0.32	-1.0
2,007,573	-		MPMX19_01923	0.32	-1.9
2,007,698	+		MPMX19_01923	0.39	-2.1
2,007,698	+		MPMX19_01923	0.39	+0.7
2,007,699	-		MPMX19_01923	0.39	-2.1
2,007,890	+		MPMX19_01923	0.50	+0.2
2,007,890	+		MPMX19_01923	0.50	-1.8
2,007,890	+		MPMX19_01923	0.50	-0.7
2,007,890	+		MPMX19_01923	0.50	+0.5
2,007,890	+		MPMX19_01923	0.50	+0.5
2,007,890	+		MPMX19_01923	0.50	-0.5
2,007,890	+		MPMX19_01923	0.50	-0.9
2,007,890	+		MPMX19_01923	0.50	+0.1
2,007,890	+		MPMX19_01923	0.50	-0.9
2,007,890	+		MPMX19_01923	0.50	+0.2
2,007,890	+		MPMX19_01923	0.50	-0.3
2,007,890	+		MPMX19_01923	0.50	-0.3
2,007,891	-		MPMX19_01923	0.50	+0.4
2,007,891	-		MPMX19_01923	0.50	-3.0
2,007,891	-		MPMX19_01923	0.50	-1.5
2,007,891	-		MPMX19_01923	0.50	-1.2
2,007,891	-		MPMX19_01923	0.50	+0.7
2,007,891	-		MPMX19_01923	0.50	-1.0
2,007,891	-		MPMX19_01923	0.50	-2.0
2,007,891	-		MPMX19_01923	0.50	+0.0
2,007,891	-		MPMX19_01923	0.50	-0.1
2,007,891	-		MPMX19_01923	0.50	+0.9
2,007,891	-		MPMX19_01923	0.50	+1.2
2,007,891	-		MPMX19_01923	0.50	+0.3
2,007,891	-		MPMX19_01923	0.50	+0.7
2,007,891	-		MPMX19_01923	0.50	-1.7