Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02930

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 5
3,257,472	-				+1.0
3,257,569	-				+0.1
3,257,588	+				-1.3
3,258,008	-		MIT1002_02929	0.58	-1.3
3,258,139	-		MIT1002_02929	0.82	-1.1
3,258,161	-		MIT1002_02929	0.86	+0.4
3,258,243	-				+1.2
3,258,278	+				-0.3
3,258,310	-				+0.9
3,258,310	-				+0.0
3,258,421	+				+1.5
3,258,421	+				+0.1
3,258,439	-				+0.7
3,258,651	+		MIT1002_02930	0.29	+3.0
3,258,660	-		MIT1002_02930	0.30	+1.2
3,258,699	+		MIT1002_02930	0.35	-2.5
3,258,699	+		MIT1002_02930	0.35	+0.5
3,258,699	+		MIT1002_02930	0.35	+1.0
3,258,723	+		MIT1002_02930	0.38	+1.6
3,258,733	+		MIT1002_02930	0.39	-0.9
3,258,751	+		MIT1002_02930	0.41	-0.3
3,258,792	-		MIT1002_02930	0.46	-0.1
3,258,826	-		MIT1002_02930	0.50	-0.6
3,258,829	-		MIT1002_02930	0.51	-0.4
3,258,932	+		MIT1002_02930	0.63	+0.0
3,259,044	-		MIT1002_02930	0.76	-0.3
3,259,098	+		MIT1002_02930	0.83	-2.6
3,259,106	+		MIT1002_02930	0.84	+1.0
3,259,106	-		MIT1002_02930	0.84	+0.9
3,259,114	-		MIT1002_02930	0.85	-0.0
3,259,114	-		MIT1002_02930	0.85	-0.9
3,259,114	-		MIT1002_02930	0.85	+1.3
3,259,391	+		MIT1002_02931	0.18	-0.1
3,259,426	+		MIT1002_02931	0.25	+0.4
3,259,448	-		MIT1002_02931	0.29	+0.7
3,259,515	-		MIT1002_02931	0.42	-0.4
3,259,542	+		MIT1002_02931	0.47	-0.3
3,259,665	-		MIT1002_02931	0.71	-0.2
3,259,665	-		MIT1002_02931	0.71	-0.3
3,259,665	-		MIT1002_02931	0.71	+1.8
3,259,767	-				+0.6
3,259,767	-				+0.2
3,259,767	-				+1.4
3,259,783	-				+0.4
3,259,849	+				-1.0
3,259,906	-				-0.6
3,259,971	-		MIT1002_02932	0.16	-2.9
3,259,982	-		MIT1002_02932	0.17	-0.8
3,260,061	+		MIT1002_02932	0.24	-1.4
3,260,183	+		MIT1002_02932	0.36	-1.0
3,260,188	-		MIT1002_02932	0.37	+0.8
3,260,215	+		MIT1002_02932	0.39	+2.5
3,260,232	-		MIT1002_02932	0.41	-2.7